RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 ZC4H2Q9NQZ6 224 aa12.17□□□□□ -0.46
HERPUD1-219ENST00000570273 TNFSF18Q9UNG2 199 aa12.17□□□□□ -0.46
HERPUD1-219ENST00000570273 STRAPQ9Y3F4 350 aaKnown RBP12.17□□□□□ -0.46
HERPUD1-219ENST00000570273 MXRA5Q9NR99 2828 aa12.17□□□□□ -0.46
HERPUD1-219ENST00000570273 IGSF23A1L1A6 192 aa12.16□□□□□ -0.46
HERPUD1-219ENST00000570273 LINC01548A6NM66 108 aa12.16□□□□□ -0.46
HERPUD1-219ENST00000570273 RNASE1P07998 156 aaKnown RBP12.16□□□□□ -0.46
HERPUD1-219ENST00000570273 EGR2P11161 476 aaPredicted RBP12.16□□□□□ -0.46
HERPUD1-219ENST00000570273 NPY1RP25929 384 aa12.16□□□□□ -0.46
HERPUD1-219ENST00000570273 SNCAP37840 140 aa12.16□□□□□ -0.46
HERPUD1-219ENST00000570273 NKX2-5P52952 324 aaPredicted RBP12.16□□□□□ -0.46
HERPUD1-219ENST00000570273 TMEM65Q6PI78 240 aa12.16□□□□□ -0.46
HERPUD1-219ENST00000570273 Q6ZS46 218 aa12.16□□□□□ -0.46
HERPUD1-219ENST00000570273 INO80EQ8NBZ0 244 aaPredicted RBP12.16□□□□□ -0.46
HERPUD1-219ENST00000570273 LFNGQ8NES3 379 aa12.16□□□□□ -0.46
HERPUD1-219ENST00000570273 SGMS2Q8NHU3 365 aa12.16□□□□□ -0.46
HERPUD1-219ENST00000570273 SLC25A31Q9H0C2 315 aa12.16□□□□□ -0.46
HERPUD1-219ENST00000570273 U3KQ87 197 aa12.16□□□□□ -0.46
HERPUD1-219ENST00000570273 FAM181BA6NEQ2 426 aa12.15□□□□□ -0.46
HERPUD1-219ENST00000570273 C15orf62A8K5M9 175 aa12.15□□□□□ -0.46
HERPUD1-219ENST00000570273 HMSDA8MTL9 139 aa12.15□□□□□ -0.46
HERPUD1-219ENST00000570273 OR8U8P0C7N1 319 aa12.15□□□□□ -0.46
HERPUD1-219ENST00000570273 RNASE2P10153 161 aaKnown RBP12.15□□□□□ -0.46
HERPUD1-219ENST00000570273 RPL12P30050 165 aaKnown RBP12.15□□□□□ -0.46
HERPUD1-219ENST00000570273 HTR2BP41595 481 aa12.15□□□□□ -0.46
HERPUD1-219ENST00000570273 EIF2B2P49770 351 aaKnown RBP12.15□□□□□ -0.46
HERPUD1-219ENST00000570273 ASPHD1Q5U4P2 390 aa12.15□□□□□ -0.46
HERPUD1-219ENST00000570273 UNQ5815/PRO19632Q6UWF5 114 aa12.15□□□□□ -0.46
HERPUD1-219ENST00000570273 STX12Q86Y82 276 aa12.15□□□□□ -0.46
HERPUD1-219ENST00000570273 MFFQ9GZY8 342 aa12.15□□□□□ -0.46
HERPUD1-219ENST00000570273 ZNF702PQ9H963 129 aa12.15□□□□□ -0.46
HERPUD1-219ENST00000570273 PLXNB1O43157 2135 aa12.14□□□□□ -0.47
HERPUD1-219ENST00000570273 RNF222A6NCQ9 220 aa12.14□□□□□ -0.47
HERPUD1-219ENST00000570273 AP4M1O00189 453 aa12.14□□□□□ -0.47
HERPUD1-219ENST00000570273 TCF21O43680 179 aa12.14□□□□□ -0.47
HERPUD1-219ENST00000570273 METTL15P1P0C7V9 234 aa12.14□□□□□ -0.47
HERPUD1-219ENST00000570273 HKR1P10072 659 aa12.14□□□□□ -0.47
HERPUD1-219ENST00000570273 AP2S1P53680 142 aaPredicted RBP12.14□□□□□ -0.47
HERPUD1-219ENST00000570273 SUB1P53999 127 aaKnown RBP eCLIP12.14□□□□□ -0.47
HERPUD1-219ENST00000570273 RAB11AP62491 216 aa12.14□□□□□ -0.47
HERPUD1-219ENST00000570273 EWSR1Q01844 656 aaKnown RBP eCLIP12.14□□□□□ -0.47
HERPUD1-219ENST00000570273 TMEM95Q3KNT9 176 aa12.14□□□□□ -0.47
HERPUD1-219ENST00000570273 TMEM14EPQ6UXP3 125 aa12.14□□□□□ -0.47
HERPUD1-219ENST00000570273 C19orf35Q6ZS72 473 aa12.14□□□□□ -0.47
HERPUD1-219ENST00000570273 TMEM252Q8N6L7 170 aa12.14□□□□□ -0.47
HERPUD1-219ENST00000570273 AQP10Q96PS8 301 aa12.14□□□□□ -0.47
HERPUD1-219ENST00000570273 P2RX4Q99571 388 aa12.14□□□□□ -0.47
HERPUD1-219ENST00000570273 LINC00527Q9UJ94 153 aa12.14□□□□□ -0.47
HERPUD1-219ENST00000570273 CUBNO60494 3623 aa12.13□□□□□ -0.47
HERPUD1-219ENST00000570273 TRAV41A0A0B4J266 112 aa12.13□□□□□ -0.47
HERPUD1-219ENST00000570273 NPIPB5A8MRT5 1133 aa12.13□□□□□ -0.47
HERPUD1-219ENST00000570273 G3V318 75 aa12.13□□□□□ -0.47
HERPUD1-219ENST00000570273 CST7O76096 145 aa12.13□□□□□ -0.47
HERPUD1-219ENST00000570273 IGF1P05019 195 aa12.13□□□□□ -0.47
HERPUD1-219ENST00000570273 CRYBA1P05813 215 aa12.13□□□□□ -0.47
HERPUD1-219ENST00000570273 CRIP2P52943 208 aaPredicted RBP12.13□□□□□ -0.47
HERPUD1-219ENST00000570273 BSXQ3C1V8 233 aa12.13□□□□□ -0.47
HERPUD1-219ENST00000570273 C2orf83Q53S99 150 aa12.13□□□□□ -0.47
HERPUD1-219ENST00000570273 OR8G2PQ6IF36 304 aa12.13□□□□□ -0.47
HERPUD1-219ENST00000570273 ACOT7LQ6ZUV0 252 aa12.13□□□□□ -0.47
HERPUD1-219ENST00000570273 ZNF114Q8NC26 417 aa12.13□□□□□ -0.47
HERPUD1-219ENST00000570273 TMEM170AQ8WVE7 144 aa12.13□□□□□ -0.47
HERPUD1-219ENST00000570273 TMEM68Q96MH6 324 aa12.13□□□□□ -0.47
HERPUD1-219ENST00000570273 F11RQ9Y624 299 aaKnown RBP12.13□□□□□ -0.47
HERPUD1-219ENST00000570273 FBXO24O75426 580 aa12.12□□□□□ -0.47
HERPUD1-219ENST00000570273 IFNA4P05014 189 aa12.12□□□□□ -0.47
HERPUD1-219ENST00000570273 DEFA4P12838 97 aa12.12□□□□□ -0.47
HERPUD1-219ENST00000570273 CTRB1P17538 263 aa12.12□□□□□ -0.47
HERPUD1-219ENST00000570273 CXCL2P19875 107 aa12.12□□□□□ -0.47
HERPUD1-219ENST00000570273 SULT1A1P50225 295 aa12.12□□□□□ -0.47
HERPUD1-219ENST00000570273 ATP5IP56385 69 aaPredicted RBP12.12□□□□□ -0.47
HERPUD1-219ENST00000570273 RPL15P61313 204 aaKnown RBP12.12□□□□□ -0.47
HERPUD1-219ENST00000570273 BAXQ07812 192 aa12.12□□□□□ -0.47
HERPUD1-219ENST00000570273 OR2F1Q13607 317 aa12.12□□□□□ -0.47
HERPUD1-219ENST00000570273 CTRB2Q6GPI1 263 aa12.12□□□□□ -0.47
HERPUD1-219ENST00000570273 ETV3LQ6ZN32 361 aa12.12□□□□□ -0.47
HERPUD1-219ENST00000570273 TTC9CQ8N5M4 171 aa12.12□□□□□ -0.47
HERPUD1-219ENST00000570273 OR5T1Q8NG75 326 aa12.12□□□□□ -0.47
HERPUD1-219ENST00000570273 OR1P1Q8NH06 330 aa12.12□□□□□ -0.47
HERPUD1-219ENST00000570273 FAM110DQ8TAY7 271 aaPredicted RBP12.12□□□□□ -0.47
HERPUD1-219ENST00000570273 NOL4LQ96MY1 436 aaPredicted RBP12.12□□□□□ -0.47
HERPUD1-219ENST00000570273 HSPB11Q9Y547 144 aa12.12□□□□□ -0.47
HERPUD1-219ENST00000570273 CRYGCP07315 174 aa12.11□□□□□ -0.47
HERPUD1-219ENST00000570273 AKIRIN2Q53H80 203 aa12.11□□□□□ -0.47
HERPUD1-219ENST00000570273 STPG2Q8N412 459 aa12.11□□□□□ -0.47
HERPUD1-219ENST00000570273 C9orf62Q8N4C0 152 aa12.11□□□□□ -0.47
HERPUD1-219ENST00000570273 TMEM217Q8N7C4 229 aa12.11□□□□□ -0.47
HERPUD1-219ENST00000570273 BSCL2Q96G97 398 aaPredicted RBP12.11□□□□□ -0.47
HERPUD1-219ENST00000570273 WNT10AQ9GZT5 417 aa12.11□□□□□ -0.47
HERPUD1-219ENST00000570273 SCAF4O95104 1147 aaKnown RBP12.11□□□□□ -0.47
HERPUD1-219ENST00000570273 MFAP2P55001 183 aa12.11□□□□□ -0.47
HERPUD1-219ENST00000570273 NHLH2Q02577 135 aa12.11□□□□□ -0.47
HERPUD1-219ENST00000570273 ZNF345Q14585 488 aa12.11□□□□□ -0.47
HERPUD1-219ENST00000570273 C19orf54Q5BKX5 351 aa12.11□□□□□ -0.47
HERPUD1-219ENST00000570273 SLC25A24Q6NUK1 477 aa12.11□□□□□ -0.47
HERPUD1-219ENST00000570273 Q6ZSV7 163 aa12.11□□□□□ -0.47
HERPUD1-219ENST00000570273 HAPLN4Q86UW8 402 aa12.11□□□□□ -0.47
HERPUD1-219ENST00000570273 Q8N2B8 174 aa12.11□□□□□ -0.47
HERPUD1-219ENST00000570273 OR1L6Q8NGR2 347 aa12.11□□□□□ -0.47
HERPUD1-219ENST00000570273 MISP3Q96FF7 219 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms