RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 NDUFA4L2Q9NRX3 87 aa6.91□□□□□ -1.3
GTF3C1-210ENST00000569394 RABL2AQ9UBK7 228 aaPredicted RBP6.91□□□□□ -1.3
GTF3C1-210ENST00000569394 SCP2D1Q9UJQ7 156 aa6.91□□□□□ -1.3
GTF3C1-210ENST00000569394 PRNDQ9UKY0 176 aa6.91□□□□□ -1.3
GTF3C1-210ENST00000569394 RABL2BQ9UNT1 228 aa6.91□□□□□ -1.3
GTF3C1-210ENST00000569394 GPR132Q9UNW8 380 aa6.91□□□□□ -1.3
GTF3C1-210ENST00000569394 IGLV11-55A0A075B6I3 123 aa6.9□□□□□ -1.3
GTF3C1-210ENST00000569394 TRBV9A0A0B4J1U6 114 aa6.9□□□□□ -1.3
GTF3C1-210ENST00000569394 OR2T8A6NH00 312 aa6.9□□□□□ -1.3
GTF3C1-210ENST00000569394 C15orf61A6NNL5 157 aa6.9□□□□□ -1.3
GTF3C1-210ENST00000569394 ST8SIA3O43173 380 aa6.9□□□□□ -1.3
GTF3C1-210ENST00000569394 CLEC3BP05452 202 aa6.9□□□□□ -1.3
GTF3C1-210ENST00000569394 CRYGCP07315 174 aa6.9□□□□□ -1.3
GTF3C1-210ENST00000569394 ZP3P21754 424 aa6.9□□□□□ -1.3
GTF3C1-210ENST00000569394 ARL3P36405 182 aa6.9□□□□□ -1.3
GTF3C1-210ENST00000569394 CCR6P51684 374 aa6.9□□□□□ -1.3
GTF3C1-210ENST00000569394 MFAP2P55001 183 aa6.9□□□□□ -1.3
GTF3C1-210ENST00000569394 EGFEM1PQ0D2K5 195 aa6.9□□□□□ -1.3
GTF3C1-210ENST00000569394 KLF9Q13886 244 aaPredicted RBP6.9□□□□□ -1.3
GTF3C1-210ENST00000569394 BAK1Q16611 211 aa6.9□□□□□ -1.3
GTF3C1-210ENST00000569394 TMEM268Q5VZI3 342 aa6.9□□□□□ -1.3
GTF3C1-210ENST00000569394 TRIQKQ629K1 86 aa6.9□□□□□ -1.3
GTF3C1-210ENST00000569394 ACSM6Q6P461 480 aa6.9□□□□□ -1.3
GTF3C1-210ENST00000569394 SGPP2Q8IWX5 399 aa6.9□□□□□ -1.3
GTF3C1-210ENST00000569394 SELENOHQ8IZQ5 122 aaKnown RBP6.9□□□□□ -1.3
GTF3C1-210ENST00000569394 SLC35G3Q8N808 338 aa6.9□□□□□ -1.3
GTF3C1-210ENST00000569394 OR9G4Q8NGQ1 327 aa6.9□□□□□ -1.3
GTF3C1-210ENST00000569394 CACNG8Q8WXS5 425 aa6.9□□□□□ -1.3
GTF3C1-210ENST00000569394 LSM10Q969L4 123 aaKnown RBP6.9□□□□□ -1.3
GTF3C1-210ENST00000569394 TRIM63Q969Q1 353 aa6.9□□□□□ -1.3
GTF3C1-210ENST00000569394 TMEM230Q96A57 120 aa6.9□□□□□ -1.3
GTF3C1-210ENST00000569394 EEF1AKMT3Q96AZ1 226 aa6.9□□□□□ -1.3
GTF3C1-210ENST00000569394 RRNAD1Q96FB5 475 aaKnown RBP6.9□□□□□ -1.3
GTF3C1-210ENST00000569394 CCDC140Q96MF4 163 aa6.9□□□□□ -1.3
GTF3C1-210ENST00000569394 TMEM56Q96MV1 263 aa6.9□□□□□ -1.3
GTF3C1-210ENST00000569394 ASCL2Q99929 193 aa6.9□□□□□ -1.3
GTF3C1-210ENST00000569394 PDCD10Q9BUL8 212 aa6.9□□□□□ -1.3
GTF3C1-210ENST00000569394 ZNF256Q9Y2P7 627 aaPredicted RBP6.9□□□□□ -1.3
GTF3C1-210ENST00000569394 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.89□□□□□ -1.31
GTF3C1-210ENST00000569394 A0A0B4J293 547 aa6.89□□□□□ -1.31
GTF3C1-210ENST00000569394 CRYM-AS1A6NIL9 109 aa6.89□□□□□ -1.31
GTF3C1-210ENST00000569394 ZNF701M0R085 212 aaPredicted RBP6.89□□□□□ -1.31
GTF3C1-210ENST00000569394 ZNF207O43670 478 aaKnown RBP6.89□□□□□ -1.31
GTF3C1-210ENST00000569394 FAUP35544 74 aaKnown RBP6.89□□□□□ -1.31
GTF3C1-210ENST00000569394 HOXA1P49639 335 aaPredicted RBP6.89□□□□□ -1.31
GTF3C1-210ENST00000569394 HSPE1P61604 102 aaKnown RBP6.89□□□□□ -1.31
GTF3C1-210ENST00000569394 KLF5Q13887 457 aaPredicted RBP6.89□□□□□ -1.31
GTF3C1-210ENST00000569394 TATDN3Q17R31 274 aa6.89□□□□□ -1.31
GTF3C1-210ENST00000569394 Q56UQ5 140 aa6.89□□□□□ -1.31
GTF3C1-210ENST00000569394 C11orf87Q6NUJ2 197 aa6.89□□□□□ -1.31
GTF3C1-210ENST00000569394 Q6ZRM9 215 aa6.89□□□□□ -1.31
GTF3C1-210ENST00000569394 ZNF429Q86V71 674 aa6.89□□□□□ -1.31
GTF3C1-210ENST00000569394 GDPD1Q8N9F7 314 aa6.89□□□□□ -1.31
GTF3C1-210ENST00000569394 GLYATL2Q8WU03 294 aa6.89□□□□□ -1.31
GTF3C1-210ENST00000569394 GPR146Q96CH1 333 aa6.89□□□□□ -1.31
GTF3C1-210ENST00000569394 TSC22D3Q99576 134 aa6.89□□□□□ -1.31
GTF3C1-210ENST00000569394 SRRQ9GZT4 340 aa6.89□□□□□ -1.31
GTF3C1-210ENST00000569394 TMEM222Q9H0R3 208 aa6.89□□□□□ -1.31
GTF3C1-210ENST00000569394 PLEKHA3Q9HB20 300 aa6.89□□□□□ -1.31
GTF3C1-210ENST00000569394 TMEM14BQ9NUH8 114 aa6.89□□□□□ -1.31
GTF3C1-210ENST00000569394 FKBP11Q9NYL4 201 aa6.89□□□□□ -1.31
GTF3C1-210ENST00000569394 PRKDCP78527 4128 aaKnown RBP6.89□□□□□ -1.31
GTF3C1-210ENST00000569394 IZUMO1RA6ND01 250 aa6.88□□□□□ -1.31
GTF3C1-210ENST00000569394 GGCTO75223 188 aaKnown RBP6.88□□□□□ -1.31
GTF3C1-210ENST00000569394 CSN3P07498 182 aa6.88□□□□□ -1.31
GTF3C1-210ENST00000569394 GP9P14770 177 aa6.88□□□□□ -1.31
GTF3C1-210ENST00000569394 HIST1H1BP16401 226 aaKnown RBP6.88□□□□□ -1.31
GTF3C1-210ENST00000569394 UCP1P25874 307 aa6.88□□□□□ -1.31
GTF3C1-210ENST00000569394 PTBP1P26599 531 aaKnown RBP eCLIP6.88□□□□□ -1.31
GTF3C1-210ENST00000569394 AP3S2P59780 193 aa6.88□□□□□ -1.31
GTF3C1-210ENST00000569394 ERHP84090 104 aaKnown RBP6.88□□□□□ -1.31
GTF3C1-210ENST00000569394 ID3Q02535 119 aa6.88□□□□□ -1.31
GTF3C1-210ENST00000569394 TM4SF20Q53R12 229 aa6.88□□□□□ -1.31
GTF3C1-210ENST00000569394 PLET1Q6UQ28 207 aa6.88□□□□□ -1.31
GTF3C1-210ENST00000569394 SCGB3A2Q96PL1 93 aa6.88□□□□□ -1.31
GTF3C1-210ENST00000569394 ENY2Q9NPA8 101 aa6.88□□□□□ -1.31
GTF3C1-210ENST00000569394 CACNG5Q9UF02 275 aa6.88□□□□□ -1.31
GTF3C1-210ENST00000569394 KCNIP3Q9Y2W7 256 aa6.88□□□□□ -1.31
GTF3C1-210ENST00000569394 F11RQ9Y624 299 aaKnown RBP6.88□□□□□ -1.31
GTF3C1-210ENST00000569394 CEBPZOSA8MTT3 80 aa6.87□□□□□ -1.31
GTF3C1-210ENST00000569394 ATG12O94817 140 aa6.87□□□□□ -1.31
GTF3C1-210ENST00000569394 BRI3O95415 125 aa6.87□□□□□ -1.31
GTF3C1-210ENST00000569394 CDS2O95674 445 aa6.87□□□□□ -1.31
GTF3C1-210ENST00000569394 FGF2P09038 288 aa6.87□□□□□ -1.31
GTF3C1-210ENST00000569394 SNCAP37840 140 aa6.87□□□□□ -1.31
GTF3C1-210ENST00000569394 PRCDQ00LT1 54 aa6.87□□□□□ -1.31
GTF3C1-210ENST00000569394 DHODHQ02127 395 aa6.87□□□□□ -1.31
GTF3C1-210ENST00000569394 CD69Q07108 199 aa6.87□□□□□ -1.31
GTF3C1-210ENST00000569394 TMEM187Q14656 261 aa6.87□□□□□ -1.31
GTF3C1-210ENST00000569394 SURF2Q15527 256 aaPredicted RBP6.87□□□□□ -1.31
GTF3C1-210ENST00000569394 MLANAQ16655 118 aa6.87□□□□□ -1.31
GTF3C1-210ENST00000569394 GUCA2BQ16661 112 aa6.87□□□□□ -1.31
GTF3C1-210ENST00000569394 IL34Q6ZMJ4 242 aa6.87□□□□□ -1.31
GTF3C1-210ENST00000569394 LYZL2Q7Z4W2 148 aa6.87□□□□□ -1.31
GTF3C1-210ENST00000569394 OR2C3Q8N628 320 aa6.87□□□□□ -1.31
GTF3C1-210ENST00000569394 OR5B3Q8NH48 314 aa6.87□□□□□ -1.31
GTF3C1-210ENST00000569394 ZNF502Q8TBZ5 544 aa6.87□□□□□ -1.31
GTF3C1-210ENST00000569394 DYNLRB2Q8TF09 96 aa6.87□□□□□ -1.31
GTF3C1-210ENST00000569394 SCARB1Q8WTV0 552 aa6.87□□□□□ -1.31
GTF3C1-210ENST00000569394 RBPMSQ93062 196 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms