RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 OPN1MW2P0DN77 364 aa8.21□□□□□ -1.1
CDH3-210ENST00000569117 OPN1MW3P0DN78 364 aa8.21□□□□□ -1.1
CDH3-210ENST00000569117 EGR2P11161 476 aaPredicted RBP8.21□□□□□ -1.1
CDH3-210ENST00000569117 CHRNA7P36544 502 aa8.21□□□□□ -1.1
CDH3-210ENST00000569117 NKX2-1P43699 371 aaPredicted RBP8.21□□□□□ -1.1
CDH3-210ENST00000569117 VDAC2P45880 294 aaPredicted RBP8.21□□□□□ -1.1
CDH3-210ENST00000569117 BCAP31P51572 246 aa8.21□□□□□ -1.1
CDH3-210ENST00000569117 ASPHD1Q5U4P2 390 aa8.21□□□□□ -1.1
CDH3-210ENST00000569117 OR2T6Q8NHC8 308 aa8.21□□□□□ -1.1
CDH3-210ENST00000569117 FAM103A1Q9BTL3 118 aaKnown RBP8.21□□□□□ -1.1
CDH3-210ENST00000569117 C16orf95Q9H693 158 aa8.21□□□□□ -1.1
CDH3-210ENST00000569117 PLEKHA3Q9HB20 300 aa8.21□□□□□ -1.1
CDH3-210ENST00000569117 GSKIPQ9P0R6 139 aa8.21□□□□□ -1.1
CDH3-210ENST00000569117 RCL1Q9Y2P8 373 aaKnown RBP8.21□□□□□ -1.1
CDH3-210ENST00000569117 TRAV41A0A0B4J266 112 aa8.2□□□□□ -1.1
CDH3-210ENST00000569117 MSGN1A6NI15 193 aa8.2□□□□□ -1.1
CDH3-210ENST00000569117 K7EPK0 472 aa8.2□□□□□ -1.1
CDH3-210ENST00000569117 SYNGR2O43760 224 aa8.2□□□□□ -1.1
CDH3-210ENST00000569117 AREGP15514 252 aa8.2□□□□□ -1.1
CDH3-210ENST00000569117 HOXA1P49639 335 aaPredicted RBP8.2□□□□□ -1.1
CDH3-210ENST00000569117 RAP2BP61225 183 aa8.2□□□□□ -1.1
CDH3-210ENST00000569117 CFHR3Q02985 330 aa8.2□□□□□ -1.1
CDH3-210ENST00000569117 WT1-ASQ06250 92 aa8.2□□□□□ -1.1
CDH3-210ENST00000569117 RAB32Q13637 225 aa8.2□□□□□ -1.1
CDH3-210ENST00000569117 ECSCRQ19T08 205 aa8.2□□□□□ -1.1
CDH3-210ENST00000569117 AKIRIN2Q53H80 203 aa8.2□□□□□ -1.1
CDH3-210ENST00000569117 SPINK9Q5DT21 86 aa8.2□□□□□ -1.1
CDH3-210ENST00000569117 STPG2Q8N412 459 aa8.2□□□□□ -1.1
CDH3-210ENST00000569117 ZNF114Q8NC26 417 aa8.2□□□□□ -1.1
CDH3-210ENST00000569117 OR10W1Q8NGF6 305 aa8.2□□□□□ -1.1
CDH3-210ENST00000569117 DTD1Q8TEA8 209 aa8.2□□□□□ -1.1
CDH3-210ENST00000569117 MISP3Q96FF7 219 aa8.2□□□□□ -1.1
CDH3-210ENST00000569117 TMEM68Q96MH6 324 aa8.2□□□□□ -1.1
CDH3-210ENST00000569117 HINT2Q9BX68 163 aa8.2□□□□□ -1.1
CDH3-210ENST00000569117 RBKSQ9H477 322 aa8.2□□□□□ -1.1
CDH3-210ENST00000569117 ZFP57Q9NU63 452 aa8.2□□□□□ -1.1
CDH3-210ENST00000569117 SERTAD4Q9NUC0 356 aa8.2□□□□□ -1.1
CDH3-210ENST00000569117 SETD2Q9BYW2 2564 aaPredicted RBP8.2□□□□□ -1.1
CDH3-210ENST00000569117 NPIPB5A8MRT5 1133 aa8.19□□□□□ -1.1
CDH3-210ENST00000569117 CEBPZOSA8MTT3 80 aa8.19□□□□□ -1.1
CDH3-210ENST00000569117 WRBO00258 174 aa8.19□□□□□ -1.1
CDH3-210ENST00000569117 LY86O95711 162 aa8.19□□□□□ -1.1
CDH3-210ENST00000569117 PET100P0DJ07 73 aa8.19□□□□□ -1.1
CDH3-210ENST00000569117 HKR1P10072 659 aa8.19□□□□□ -1.1
CDH3-210ENST00000569117 S100A10P60903 97 aa8.19□□□□□ -1.1
CDH3-210ENST00000569117 POLR2GP62487 172 aaKnown RBP eCLIP8.19□□□□□ -1.1
CDH3-210ENST00000569117 TMEM267Q0VDI3 215 aaPredicted RBP8.19□□□□□ -1.1
CDH3-210ENST00000569117 BSXQ3C1V8 233 aa8.19□□□□□ -1.1
CDH3-210ENST00000569117 UNQ5815/PRO19632Q6UWF5 114 aa8.19□□□□□ -1.1
CDH3-210ENST00000569117 PRIMA1Q86XR5 153 aa8.19□□□□□ -1.1
CDH3-210ENST00000569117 LURAP1LQ8IV03 231 aa8.19□□□□□ -1.1
CDH3-210ENST00000569117 LFNGQ8NES3 379 aa8.19□□□□□ -1.1
CDH3-210ENST00000569117 OR4F5Q8NH21 305 aa8.19□□□□□ -1.1
CDH3-210ENST00000569117 FAM110DQ8TAY7 271 aaPredicted RBP8.19□□□□□ -1.1
CDH3-210ENST00000569117 PPP1R1CQ8WVI7 109 aa8.19□□□□□ -1.1
CDH3-210ENST00000569117 NOL4LQ96MY1 436 aaPredicted RBP8.19□□□□□ -1.1
CDH3-210ENST00000569117 CIB3Q96Q77 187 aaPredicted RBP8.19□□□□□ -1.1
CDH3-210ENST00000569117 GON7Q9BXV9 100 aa8.19□□□□□ -1.1
CDH3-210ENST00000569117 MAGT1Q9H0U3 335 aa8.19□□□□□ -1.1
CDH3-210ENST00000569117 ENY2Q9NPA8 101 aa8.19□□□□□ -1.1
CDH3-210ENST00000569117 G3V318 75 aa8.18□□□□□ -1.1
CDH3-210ENST00000569117 SSSCA1O60232 199 aa8.18□□□□□ -1.1
CDH3-210ENST00000569117 DEDDO75618 318 aa8.18□□□□□ -1.1
CDH3-210ENST00000569117 CRYGCP07315 174 aa8.18□□□□□ -1.1
CDH3-210ENST00000569117 APELAP0DMC3 54 aa8.18□□□□□ -1.1
CDH3-210ENST00000569117 OR13C7P0DN81 318 aa8.18□□□□□ -1.1
CDH3-210ENST00000569117 CTRB1P17538 263 aa8.18□□□□□ -1.1
CDH3-210ENST00000569117 PSMB6P28072 239 aa8.18□□□□□ -1.1
CDH3-210ENST00000569117 PPIFP30405 207 aaKnown RBP8.18□□□□□ -1.1
CDH3-210ENST00000569117 CD83Q01151 205 aa8.18□□□□□ -1.1
CDH3-210ENST00000569117 LRRC37A5PQ49AS3 106 aa8.18□□□□□ -1.1
CDH3-210ENST00000569117 CTRB2Q6GPI1 263 aa8.18□□□□□ -1.1
CDH3-210ENST00000569117 C11orf87Q6NUJ2 197 aa8.18□□□□□ -1.1
CDH3-210ENST00000569117 TTC9CQ8N5M4 171 aa8.18□□□□□ -1.1
CDH3-210ENST00000569117 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.18□□□□□ -1.1
CDH3-210ENST00000569117 SLC24A4Q8NFF2 622 aa8.18□□□□□ -1.1
CDH3-210ENST00000569117 LINC01006Q8NI28 216 aa8.18□□□□□ -1.1
CDH3-210ENST00000569117 TAF15Q92804 592 aaKnown RBP eCLIP8.18□□□□□ -1.1
CDH3-210ENST00000569117 RAB40CQ96S21 281 aa8.18□□□□□ -1.1
CDH3-210ENST00000569117 HIPK2Q9H2X6 1198 aa8.18□□□□□ -1.1
CDH3-210ENST00000569117 C11orf1Q9H5F2 150 aa8.18□□□□□ -1.1
CDH3-210ENST00000569117 HEYLQ9NQ87 328 aaPredicted RBP8.18□□□□□ -1.1
CDH3-210ENST00000569117 LINC00527Q9UJ94 153 aa8.18□□□□□ -1.1
CDH3-210ENST00000569117 LSM5Q9Y4Y9 91 aaKnown RBP8.18□□□□□ -1.1
CDH3-210ENST00000569117 WSB1Q9Y6I7 421 aa8.18□□□□□ -1.1
CDH3-210ENST00000569117 A0A1B0GUS0 222 aa8.17□□□□□ -1.1
CDH3-210ENST00000569117 G3V3Q6 166 aa8.17□□□□□ -1.1
CDH3-210ENST00000569117 H3BUA1 57 aa8.17□□□□□ -1.1
CDH3-210ENST00000569117 SOX15O60248 233 aa8.17□□□□□ -1.1
CDH3-210ENST00000569117 BRI3O95415 125 aa8.17□□□□□ -1.1
CDH3-210ENST00000569117 MPC2O95563 127 aa8.17□□□□□ -1.1
CDH3-210ENST00000569117 IGHG4P01861 327 aa8.17□□□□□ -1.1
CDH3-210ENST00000569117 REG1AP05451 166 aa8.17□□□□□ -1.1
CDH3-210ENST00000569117 RNASE2P10153 161 aaKnown RBP8.17□□□□□ -1.1
CDH3-210ENST00000569117 IAPPP10997 89 aa8.17□□□□□ -1.1
CDH3-210ENST00000569117 HTR2BP41595 481 aa8.17□□□□□ -1.1
CDH3-210ENST00000569117 TAS2R30P59541 319 aa8.17□□□□□ -1.1
CDH3-210ENST00000569117 ERHP84090 104 aaKnown RBP8.17□□□□□ -1.1
CDH3-210ENST00000569117 FGL1Q08830 312 aa8.17□□□□□ -1.1
CDH3-210ENST00000569117 KLK9Q2XQG4 91 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms