RNA–Protein interactions for RNA: ENST00000568890.5

CNEP1R1-210, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 1,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-210ENST00000568890 DEFA1P59665 94 aa12.87□□□□□ -0.35
CNEP1R1-210ENST00000568890 DEFA3P59666 94 aa12.87□□□□□ -0.35
CNEP1R1-210ENST00000568890 PRR31Q5SQ13 230 aa12.87□□□□□ -0.35
CNEP1R1-210ENST00000568890 C4orf3Q8WVX3 66 aa12.87□□□□□ -0.35
CNEP1R1-210ENST00000568890 P2RX4Q99571 388 aa12.87□□□□□ -0.35
CNEP1R1-210ENST00000568890 S4R3C0 116 aa12.87□□□□□ -0.35
CNEP1R1-210ENST00000568890 SULT1A3P0DMM9 295 aa12.86□□□□□ -0.35
CNEP1R1-210ENST00000568890 SULT1A4P0DMN0 295 aa12.86□□□□□ -0.35
CNEP1R1-210ENST00000568890 PDLIM3Q53GG5 364 aaPredicted RBP12.86□□□□□ -0.35
CNEP1R1-210ENST00000568890 OR2C3Q8N628 320 aa12.86□□□□□ -0.35
CNEP1R1-210ENST00000568890 A0A1B0GU03 582 aa12.85□□□□□ -0.35
CNEP1R1-210ENST00000568890 NUDT19A8MXV4 375 aa12.85□□□□□ -0.35
CNEP1R1-210ENST00000568890 TRBV12-3P01733 135 aa12.85□□□□□ -0.35
CNEP1R1-210ENST00000568890 SMCO1Q147U7 214 aa12.85□□□□□ -0.35
CNEP1R1-210ENST00000568890 OR52E5Q8NH55 327 aa12.85□□□□□ -0.35
CNEP1R1-210ENST00000568890 ZNF431Q8TF32 576 aaPredicted RBP12.85□□□□□ -0.35
CNEP1R1-210ENST00000568890 TMED3Q9Y3Q3 217 aa12.85□□□□□ -0.35
CNEP1R1-210ENST00000568890 DUXBA0A1W2PPF3 345 aa12.85□□□□□ -0.35
CNEP1R1-210ENST00000568890 INMT-MINDY4F8WBC2 141 aa12.85□□□□□ -0.35
CNEP1R1-210ENST00000568890 DEFA4P12838 97 aa12.85□□□□□ -0.35
CNEP1R1-210ENST00000568890 SPCS3P61009 180 aa12.85□□□□□ -0.35
CNEP1R1-210ENST00000568890 C15orf32Q32M92 178 aa12.85□□□□□ -0.35
CNEP1R1-210ENST00000568890 PLET1Q6UQ28 207 aa12.85□□□□□ -0.35
CNEP1R1-210ENST00000568890 OR11H1Q8NG94 326 aa12.85□□□□□ -0.35
CNEP1R1-210ENST00000568890 OR10C1Q96KK4 312 aa12.85□□□□□ -0.35
CNEP1R1-210ENST00000568890 HSPB7Q9UBY9 170 aa12.85□□□□□ -0.35
CNEP1R1-210ENST00000568890 FBXL7Q9UJT9 491 aa12.85□□□□□ -0.35
CNEP1R1-210ENST00000568890 F11RQ9Y624 299 aaKnown RBP12.85□□□□□ -0.35
CNEP1R1-210ENST00000568890 INS-IGF2F8WCM5 200 aa12.84□□□□□ -0.35
CNEP1R1-210ENST00000568890 CCL24O00175 119 aa12.84□□□□□ -0.35
CNEP1R1-210ENST00000568890 IL5P05113 134 aa12.84□□□□□ -0.35
CNEP1R1-210ENST00000568890 RUNX1Q01196 453 aa12.84□□□□□ -0.35
CNEP1R1-210ENST00000568890 THOC7Q6I9Y2 204 aaKnown RBP12.84□□□□□ -0.35
CNEP1R1-210ENST00000568890 NECAP1Q8NC96 275 aa12.84□□□□□ -0.35
CNEP1R1-210ENST00000568890 COQ8AQ8NI60 647 aa12.84□□□□□ -0.35
CNEP1R1-210ENST00000568890 NOTCH1P46531 2555 aa12.83□□□□□ -0.35
CNEP1R1-210ENST00000568890 MFSD2BA6NFX1 497 aa12.83□□□□□ -0.35
CNEP1R1-210ENST00000568890 IGHV3-23P01764 117 aa12.83□□□□□ -0.35
CNEP1R1-210ENST00000568890 TNFRSF9Q07011 255 aa12.83□□□□□ -0.35
CNEP1R1-210ENST00000568890 ZNF343Q6P1L6 599 aa12.83□□□□□ -0.35
CNEP1R1-210ENST00000568890 HSD17B13Q7Z5P4 300 aaPredicted RBP12.83□□□□□ -0.35
CNEP1R1-210ENST00000568890 OR4F17Q8NGA8 305 aa12.83□□□□□ -0.35
CNEP1R1-210ENST00000568890 TMEM170AQ8WVE7 144 aa12.83□□□□□ -0.35
CNEP1R1-210ENST00000568890 OR4F4Q96R69 305 aa12.83□□□□□ -0.35
CNEP1R1-210ENST00000568890 PLEKHA3Q9HB20 300 aa12.83□□□□□ -0.35
CNEP1R1-210ENST00000568890 IGHV4OR15-8A0A075B7B6 117 aa12.83□□□□□ -0.36
CNEP1R1-210ENST00000568890 A0A087WW49 117 aa12.83□□□□□ -0.36
CNEP1R1-210ENST00000568890 IGHV3-21A0A0B4J1V1 117 aa12.83□□□□□ -0.36
CNEP1R1-210ENST00000568890 ANKRD34BA5PLL1 514 aa12.83□□□□□ -0.36
CNEP1R1-210ENST00000568890 CCSO14618 274 aa12.83□□□□□ -0.36
CNEP1R1-210ENST00000568890 LGALS1P09382 135 aaKnown RBP12.83□□□□□ -0.36
CNEP1R1-210ENST00000568890 SLC25A6P12236 298 aa12.83□□□□□ -0.36
CNEP1R1-210ENST00000568890 SLC25A24Q6NUK1 477 aa12.83□□□□□ -0.36
CNEP1R1-210ENST00000568890 MRPL41Q8IXM3 137 aaKnown RBP12.83□□□□□ -0.36
CNEP1R1-210ENST00000568890 UXS1Q8NBZ7 420 aa12.83□□□□□ -0.36
CNEP1R1-210ENST00000568890 USMG5Q96IX5 58 aa12.83□□□□□ -0.36
CNEP1R1-210ENST00000568890 ATP5G2Q06055 141 aa12.82□□□□□ -0.36
CNEP1R1-210ENST00000568890 FHL3Q13643 280 aa12.82□□□□□ -0.36
CNEP1R1-210ENST00000568890 BSXQ3C1V8 233 aa12.82□□□□□ -0.36
CNEP1R1-210ENST00000568890 TREML4Q6UXN2 200 aa12.82□□□□□ -0.36
CNEP1R1-210ENST00000568890 C12orf45Q8N5I9 185 aaPredicted RBP12.82□□□□□ -0.36
CNEP1R1-210ENST00000568890 OR1P1Q8NH06 330 aa12.82□□□□□ -0.36
CNEP1R1-210ENST00000568890 PDCD10Q9BUL8 212 aa12.82□□□□□ -0.36
CNEP1R1-210ENST00000568890 RBKSQ9H477 322 aa12.82□□□□□ -0.36
CNEP1R1-210ENST00000568890 PALMDQ9NP74 551 aa12.82□□□□□ -0.36
CNEP1R1-210ENST00000568890 A0A0G2JLM5 398 aa12.81□□□□□ -0.36
CNEP1R1-210ENST00000568890 C13orf42A0A1B0GVH6 325 aa12.81□□□□□ -0.36
CNEP1R1-210ENST00000568890 FAM223BA6NKX1 122 aa12.81□□□□□ -0.36
CNEP1R1-210ENST00000568890 RNASE2P10153 161 aaKnown RBP12.81□□□□□ -0.36
CNEP1R1-210ENST00000568890 DCTN2Q13561 401 aaKnown RBP12.81□□□□□ -0.36
CNEP1R1-210ENST00000568890 MLANAQ16655 118 aa12.81□□□□□ -0.36
CNEP1R1-210ENST00000568890 FAM223AQ8IWN6 122 aa12.81□□□□□ -0.36
CNEP1R1-210ENST00000568890 LINC00482Q8N8I6 264 aa12.81□□□□□ -0.36
CNEP1R1-210ENST00000568890 ZNF114Q8NC26 417 aa12.81□□□□□ -0.36
CNEP1R1-210ENST00000568890 WFDC9Q8NEX5 89 aa12.81□□□□□ -0.36
CNEP1R1-210ENST00000568890 OR1N2Q8NGR9 330 aa12.81□□□□□ -0.36
CNEP1R1-210ENST00000568890 OR1S1Q8NH92 325 aa12.81□□□□□ -0.36
CNEP1R1-210ENST00000568890 CCDC140Q96MF4 163 aa12.81□□□□□ -0.36
CNEP1R1-210ENST00000568890 K7EIM0 57 aa12.81□□□□□ -0.36
CNEP1R1-210ENST00000568890 IGHV3-48P01763 117 aa12.81□□□□□ -0.36
CNEP1R1-210ENST00000568890 HOXA1P49639 335 aaPredicted RBP12.81□□□□□ -0.36
CNEP1R1-210ENST00000568890 ERHP84090 104 aaKnown RBP12.81□□□□□ -0.36
CNEP1R1-210ENST00000568890 PVRIGQ6DKI7 326 aa12.81□□□□□ -0.36
CNEP1R1-210ENST00000568890 MAGT1Q9H0U3 335 aa12.81□□□□□ -0.36
CNEP1R1-210ENST00000568890 PTTG1O95997 202 aa12.8□□□□□ -0.36
CNEP1R1-210ENST00000568890 DHFRP00374 187 aa12.8□□□□□ -0.36
CNEP1R1-210ENST00000568890 MYCNOSP40205 109 aa12.8□□□□□ -0.36
CNEP1R1-210ENST00000568890 ID3Q02535 119 aa12.8□□□□□ -0.36
CNEP1R1-210ENST00000568890 OR4D5Q8NGN0 318 aa12.8□□□□□ -0.36
CNEP1R1-210ENST00000568890 CEBPZOSA8MTT3 80 aa12.8□□□□□ -0.36
CNEP1R1-210ENST00000568890 F8W735 103 aaPredicted RBP12.8□□□□□ -0.36
CNEP1R1-210ENST00000568890 I3L2K1 104 aa12.8□□□□□ -0.36
CNEP1R1-210ENST00000568890 EXOSC2Q13868 293 aaKnown RBP12.8□□□□□ -0.36
CNEP1R1-210ENST00000568890 SCARB1Q8WTV0 552 aa12.8□□□□□ -0.36
CNEP1R1-210ENST00000568890 HEYLQ9NQ87 328 aaPredicted RBP12.8□□□□□ -0.36
CNEP1R1-210ENST00000568890 PIGBOS1A0A0B4J2F0 54 aa12.79□□□□□ -0.36
CNEP1R1-210ENST00000568890 PF4P02776 101 aa12.79□□□□□ -0.36
CNEP1R1-210ENST00000568890 HIST1H1BP16401 226 aaKnown RBP12.79□□□□□ -0.36
CNEP1R1-210ENST00000568890 SNCAP37840 140 aa12.79□□□□□ -0.36
CNEP1R1-210ENST00000568890 SLURP1P55000 103 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms