RNA–Protein interactions for RNA: ENST00000568870.1

TCF25-223, Transcript of transcription factor 25, human

TSL 2

Gene TCF25, Length 263 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF25-223	ENST00000568870	MED28	Q9H204	178 aa		10.86	□□□□□ -0.67
TCF25-223	ENST00000568870	HEYL	Q9NQ87	328 aa	Predicted RBP	10.86	□□□□□ -0.67
TCF25-223	ENST00000568870	MGAT4C	Q9UBM8	478 aa		10.86	□□□□□ -0.67
TCF25-223	ENST00000568870		A0A1W2PRX2	142 aa		10.85	□□□□□ -0.67
TCF25-223	ENST00000568870	FAM90A26	D6RGX4	464 aa		10.85	□□□□□ -0.67
TCF25-223	ENST00000568870		H3BUA1	57 aa		10.85	□□□□□ -0.67
TCF25-223	ENST00000568870	WRB	O00258	174 aa		10.85	□□□□□ -0.67
TCF25-223	ENST00000568870	MED6	O75586	246 aa		10.85	□□□□□ -0.67
TCF25-223	ENST00000568870	CRYGC	P07315	174 aa		10.85	□□□□□ -0.67
TCF25-223	ENST00000568870	IAPP	P10997	89 aa		10.85	□□□□□ -0.67
TCF25-223	ENST00000568870	SNCA	P37840	140 aa		10.85	□□□□□ -0.67
TCF25-223	ENST00000568870	NKX2-1	P43699	371 aa	Predicted RBP	10.85	□□□□□ -0.67
TCF25-223	ENST00000568870	RAB9A	P51151	201 aa		10.85	□□□□□ -0.67
TCF25-223	ENST00000568870	KRTAP21-3	Q3LHN1	58 aa		10.85	□□□□□ -0.67
TCF25-223	ENST00000568870	PDLIM3	Q53GG5	364 aa	Predicted RBP	10.85	□□□□□ -0.67
TCF25-223	ENST00000568870	TCTEX1D4	Q5JR98	221 aa		10.85	□□□□□ -0.67
TCF25-223	ENST00000568870	C11orf87	Q6NUJ2	197 aa		10.85	□□□□□ -0.67
TCF25-223	ENST00000568870	OR2C3	Q8N628	320 aa		10.85	□□□□□ -0.67
TCF25-223	ENST00000568870	DTD1	Q8TEA8	209 aa		10.85	□□□□□ -0.67
TCF25-223	ENST00000568870	CITED2	Q99967	270 aa	Predicted RBP	10.85	□□□□□ -0.67
TCF25-223	ENST00000568870	KLK15	Q9H2R5	256 aa		10.85	□□□□□ -0.67
TCF25-223	ENST00000568870	HIPK2	Q9H2X6	1198 aa		10.85	□□□□□ -0.67
TCF25-223	ENST00000568870	SLA2	Q9H6Q3	261 aa		10.85	□□□□□ -0.67
TCF25-223	ENST00000568870	CYB5B	O43169	146 aa		10.84	□□□□□ -0.67
TCF25-223	ENST00000568870	OR2J3	O76001	311 aa		10.84	□□□□□ -0.67
TCF25-223	ENST00000568870	POLR2G	P62487	172 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
TCF25-223	ENST00000568870	SLC25A24	Q6NUK1	477 aa		10.84	□□□□□ -0.67
TCF25-223	ENST00000568870	CITED1	Q99966	193 aa		10.84	□□□□□ -0.67
TCF25-223	ENST00000568870	F11R	Q9Y624	299 aa	Known RBP	10.84	□□□□□ -0.67
TCF25-223	ENST00000568870	COL6A5	A8TX70	2615 aa		10.83	□□□□□ -0.68
TCF25-223	ENST00000568870	SYNGR2	O43760	224 aa		10.83	□□□□□ -0.68
TCF25-223	ENST00000568870	SSSCA1	O60232	199 aa		10.83	□□□□□ -0.68
TCF25-223	ENST00000568870	HIST1H1B	P16401	226 aa	Known RBP	10.83	□□□□□ -0.68
TCF25-223	ENST00000568870	SUB1	P53999	127 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
TCF25-223	ENST00000568870	S100A10	P60903	97 aa		10.83	□□□□□ -0.68
TCF25-223	ENST00000568870	RHOG	P84095	191 aa		10.83	□□□□□ -0.68
TCF25-223	ENST00000568870	CD83	Q01151	205 aa		10.83	□□□□□ -0.68
TCF25-223	ENST00000568870	NSUN5P1	Q3KNT7	163 aa		10.83	□□□□□ -0.68
TCF25-223	ENST00000568870	SHISA2	Q6UWI4	295 aa		10.83	□□□□□ -0.68
TCF25-223	ENST00000568870	MISP3	Q96FF7	219 aa		10.83	□□□□□ -0.68
TCF25-223	ENST00000568870	P2RX4	Q99571	388 aa		10.83	□□□□□ -0.68
TCF25-223	ENST00000568870	FBXL7	Q9UJT9	491 aa		10.83	□□□□□ -0.68
TCF25-223	ENST00000568870	LSM5	Q9Y4Y9	91 aa	Known RBP	10.83	□□□□□ -0.68
TCF25-223	ENST00000568870	TSSC4	Q9Y5U2	329 aa	Predicted RBP	10.83	□□□□□ -0.68
TCF25-223	ENST00000568870	IGLV11-55	A0A075B6I3	123 aa		10.82	□□□□□ -0.68
TCF25-223	ENST00000568870	NUDT19	A8MXV4	375 aa		10.82	□□□□□ -0.68
TCF25-223	ENST00000568870	INS-IGF2	F8WCM5	200 aa		10.82	□□□□□ -0.68
TCF25-223	ENST00000568870	IFNA10	P01566	189 aa		10.82	□□□□□ -0.68
TCF25-223	ENST00000568870	IGHV3-11	P01762	117 aa		10.82	□□□□□ -0.68
TCF25-223	ENST00000568870	MBP	P02686	304 aa	Predicted RBP	10.82	□□□□□ -0.68
TCF25-223	ENST00000568870	HTR2B	P41595	481 aa		10.82	□□□□□ -0.68
TCF25-223	ENST00000568870	RRAS2	P62070	204 aa	Predicted RBP	10.82	□□□□□ -0.68
TCF25-223	ENST00000568870	RPL23A	P62750	156 aa	Known RBP	10.82	□□□□□ -0.68
TCF25-223	ENST00000568870	ID3	Q02535	119 aa		10.82	□□□□□ -0.68
TCF25-223	ENST00000568870	FCN2	Q15485	313 aa		10.82	□□□□□ -0.68
TCF25-223	ENST00000568870	RNF152	Q8N8N0	203 aa		10.82	□□□□□ -0.68
TCF25-223	ENST00000568870	KLHL30-AS1	Q8NEE0	82 aa		10.82	□□□□□ -0.68
TCF25-223	ENST00000568870	SLC24A4	Q8NFF2	622 aa		10.82	□□□□□ -0.68
TCF25-223	ENST00000568870	OR1L6	Q8NGR2	347 aa		10.82	□□□□□ -0.68
TCF25-223	ENST00000568870	OR1P1	Q8NH06	330 aa		10.82	□□□□□ -0.68
TCF25-223	ENST00000568870	FANCD2OS	Q96PS1	177 aa		10.82	□□□□□ -0.68
TCF25-223	ENST00000568870	OR5B12	Q96R08	314 aa		10.82	□□□□□ -0.68
TCF25-223	ENST00000568870	ZFP57	Q9NU63	452 aa		10.82	□□□□□ -0.68
TCF25-223	ENST00000568870	THYN1	Q9P016	225 aa		10.82	□□□□□ -0.68
TCF25-223	ENST00000568870	PAIP2B	Q9ULR5	123 aa	Known RBP	10.82	□□□□□ -0.68
TCF25-223	ENST00000568870	RCL1	Q9Y2P8	373 aa	Known RBP	10.82	□□□□□ -0.68
TCF25-223	ENST00000568870	TRBV9	A0A0B4J1U6	114 aa		10.81	□□□□□ -0.68
TCF25-223	ENST00000568870		A0A0G2JLM5	398 aa		10.81	□□□□□ -0.68
TCF25-223	ENST00000568870	FAM223B	A6NKX1	122 aa		10.81	□□□□□ -0.68
TCF25-223	ENST00000568870	NDUFB8	O95169	186 aa		10.81	□□□□□ -0.68
TCF25-223	ENST00000568870	BRI3	O95415	125 aa		10.81	□□□□□ -0.68
TCF25-223	ENST00000568870	RNASE2	P10153	161 aa	Known RBP	10.81	□□□□□ -0.68
TCF25-223	ENST00000568870	NPY1R	P25929	384 aa		10.81	□□□□□ -0.68
TCF25-223	ENST00000568870	MFAP2	P55001	183 aa		10.81	□□□□□ -0.68
TCF25-223	ENST00000568870	H2BFS	P57053	126 aa		10.81	□□□□□ -0.68
TCF25-223	ENST00000568870	CYCS	P99999	105 aa	Known RBP	10.81	□□□□□ -0.68
TCF25-223	ENST00000568870	ATP5G2	Q06055	141 aa		10.81	□□□□□ -0.68
TCF25-223	ENST00000568870	NDUFA11	Q86Y39	141 aa		10.81	□□□□□ -0.68
TCF25-223	ENST00000568870	FAM223A	Q8IWN6	122 aa		10.81	□□□□□ -0.68
TCF25-223	ENST00000568870	ZNF491	Q8N8L2	437 aa		10.81	□□□□□ -0.68
TCF25-223	ENST00000568870	ZNF114	Q8NC26	417 aa		10.81	□□□□□ -0.68
TCF25-223	ENST00000568870	NECAP1	Q8NC96	275 aa		10.81	□□□□□ -0.68
TCF25-223	ENST00000568870	PINX1	Q96BK5	328 aa	Known RBP	10.81	□□□□□ -0.68
TCF25-223	ENST00000568870	UBE2E2	Q96LR5	201 aa		10.81	□□□□□ -0.68
TCF25-223	ENST00000568870	CIB3	Q96Q77	187 aa	Predicted RBP	10.81	□□□□□ -0.68
TCF25-223	ENST00000568870	DMRT1	Q9Y5R6	373 aa		10.81	□□□□□ -0.68
TCF25-223	ENST00000568870	IGHV3-21	A0A0B4J1V1	117 aa		10.8	□□□□□ -0.68
TCF25-223	ENST00000568870		H3BP45	60 aa		10.8	□□□□□ -0.68
TCF25-223	ENST00000568870		K7EPK0	472 aa		10.8	□□□□□ -0.68
TCF25-223	ENST00000568870		L7N2F9	121 aa		10.8	□□□□□ -0.68
TCF25-223	ENST00000568870	CXCL3	P19876	107 aa		10.8	□□□□□ -0.68
TCF25-223	ENST00000568870	VAMP2	P63027	116 aa		10.8	□□□□□ -0.68
TCF25-223	ENST00000568870	RAB32	Q13637	225 aa		10.8	□□□□□ -0.68
TCF25-223	ENST00000568870	C15orf32	Q32M92	178 aa		10.8	□□□□□ -0.68
TCF25-223	ENST00000568870	LRRC37A5P	Q49AS3	106 aa		10.8	□□□□□ -0.68
TCF25-223	ENST00000568870	C18orf65	Q6ZTR6	163 aa		10.8	□□□□□ -0.68
TCF25-223	ENST00000568870	OR11H7	Q8NGC8	314 aa		10.8	□□□□□ -0.68
TCF25-223	ENST00000568870	MYOZ3	Q8TDC0	251 aa		10.8	□□□□□ -0.68
TCF25-223	ENST00000568870	USMG5	Q96IX5	58 aa		10.8	□□□□□ -0.68
TCF25-223	ENST00000568870	NMES1	Q9C002	83 aa		10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms