RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 NDUFB8O95169 186 aa13.26□□□□□ -0.29
COMMD4-220ENST00000567720 SFT2D2O95562 160 aa13.26□□□□□ -0.29
COMMD4-220ENST00000567720 DHFRP00374 187 aa13.26□□□□□ -0.29
COMMD4-220ENST00000567720 OR8U8P0C7N1 319 aa13.26□□□□□ -0.29
COMMD4-220ENST00000567720 IGLL1P15814 213 aa13.26□□□□□ -0.29
COMMD4-220ENST00000567720 MECP2P51608 486 aaKnown RBP13.26□□□□□ -0.29
COMMD4-220ENST00000567720 MFAP2P55001 183 aa13.26□□□□□ -0.29
COMMD4-220ENST00000567720 UBE2MP61081 183 aaKnown RBP13.26□□□□□ -0.29
COMMD4-220ENST00000567720 SRPXP78539 464 aa13.26□□□□□ -0.29
COMMD4-220ENST00000567720 IFITM3Q01628 133 aa13.26□□□□□ -0.29
COMMD4-220ENST00000567720 OXLD1Q5BKU9 147 aa13.26□□□□□ -0.29
COMMD4-220ENST00000567720 LYZL2Q7Z4W2 148 aa13.26□□□□□ -0.29
COMMD4-220ENST00000567720 LGI3Q8N145 548 aa13.26□□□□□ -0.29
COMMD4-220ENST00000567720 SHPKQ9UHJ6 478 aa13.26□□□□□ -0.29
COMMD4-220ENST00000567720 FBXL7Q9UJT9 491 aa13.26□□□□□ -0.29
COMMD4-220ENST00000567720 F11RQ9Y624 299 aaKnown RBP13.26□□□□□ -0.29
COMMD4-220ENST00000567720 ANKRD34BA5PLL1 514 aa13.25□□□□□ -0.29
COMMD4-220ENST00000567720 MFSD2BA6NFX1 497 aa13.25□□□□□ -0.29
COMMD4-220ENST00000567720 HLA-AP01891 365 aaKnown RBP13.25□□□□□ -0.29
COMMD4-220ENST00000567720 DEFA4P12838 97 aa13.25□□□□□ -0.29
COMMD4-220ENST00000567720 ANXA7P20073 488 aaKnown RBP13.25□□□□□ -0.29
COMMD4-220ENST00000567720 ASAH1Q13510 395 aa13.25□□□□□ -0.29
COMMD4-220ENST00000567720 LRTM2Q8N967 370 aa13.25□□□□□ -0.29
COMMD4-220ENST00000567720 RCC1LQ96I51 464 aaKnown RBP13.25□□□□□ -0.29
COMMD4-220ENST00000567720 CCDC140Q96MF4 163 aa13.25□□□□□ -0.29
COMMD4-220ENST00000567720 PLEKHA3Q9HB20 300 aa13.25□□□□□ -0.29
COMMD4-220ENST00000567720 S4R3C0 116 aa13.25□□□□□ -0.29
COMMD4-220ENST00000567720 PRKDCP78527 4128 aaKnown RBP13.24□□□□□ -0.29
COMMD4-220ENST00000567720 HSPB1P04792 205 aaKnown RBP13.24□□□□□ -0.29
COMMD4-220ENST00000567720 HIST1H1BP16401 226 aaKnown RBP13.24□□□□□ -0.29
COMMD4-220ENST00000567720 ATP5G2Q06055 141 aa13.24□□□□□ -0.29
COMMD4-220ENST00000567720 DHRS2Q13268 280 aa13.24□□□□□ -0.29
COMMD4-220ENST00000567720 OR2C3Q8N628 320 aa13.24□□□□□ -0.29
COMMD4-220ENST00000567720 ZNF114Q8NC26 417 aa13.24□□□□□ -0.29
COMMD4-220ENST00000567720 DPF1Q92782 380 aa13.24□□□□□ -0.29
COMMD4-220ENST00000567720 DUXBA0A1W2PPF3 345 aa13.23□□□□□ -0.29
COMMD4-220ENST00000567720 C9orf170A2RU37 121 aa13.23□□□□□ -0.29
COMMD4-220ENST00000567720 NXPH3O95157 252 aa13.23□□□□□ -0.29
COMMD4-220ENST00000567720 IFNA17P01571 189 aa13.23□□□□□ -0.29
COMMD4-220ENST00000567720 IGHV3-23P01764 117 aa13.23□□□□□ -0.29
COMMD4-220ENST00000567720 TCRBP04435 133 aa13.23□□□□□ -0.29
COMMD4-220ENST00000567720 OR4E1P0C645 316 aa13.23□□□□□ -0.29
COMMD4-220ENST00000567720 HOXD3P31249 432 aaPredicted RBP13.23□□□□□ -0.29
COMMD4-220ENST00000567720 HOXA1P49639 335 aaPredicted RBP13.23□□□□□ -0.29
COMMD4-220ENST00000567720 BEAN1Q3B7T3 259 aa13.23□□□□□ -0.29
COMMD4-220ENST00000567720 DCUN1D4Q92564 292 aa13.23□□□□□ -0.29
COMMD4-220ENST00000567720 DLX4Q92988 240 aaPredicted RBP13.23□□□□□ -0.29
COMMD4-220ENST00000567720 PDCD10Q9BUL8 212 aa13.23□□□□□ -0.29
COMMD4-220ENST00000567720 NUDT15Q9NV35 164 aa13.23□□□□□ -0.29
COMMD4-220ENST00000567720 PEF1Q9UBV8 284 aaKnown RBP13.23□□□□□ -0.29
COMMD4-220ENST00000567720 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.22□□□□□ -0.29
COMMD4-220ENST00000567720 INS-IGF2F8WCM5 200 aa13.22□□□□□ -0.29
COMMD4-220ENST00000567720 BMPR1BO00238 502 aa13.22□□□□□ -0.29
COMMD4-220ENST00000567720 SULT1A3P0DMM9 295 aa13.22□□□□□ -0.29
COMMD4-220ENST00000567720 SULT1A4P0DMN0 295 aa13.22□□□□□ -0.29
COMMD4-220ENST00000567720 PDLIM3Q53GG5 364 aaPredicted RBP13.22□□□□□ -0.29
COMMD4-220ENST00000567720 KPRPQ5T749 579 aaPredicted RBP13.22□□□□□ -0.29
COMMD4-220ENST00000567720 C11orf87Q6NUJ2 197 aa13.22□□□□□ -0.29
COMMD4-220ENST00000567720 LYG2Q86SG7 212 aa13.22□□□□□ -0.29
COMMD4-220ENST00000567720 OR1P1Q8NH06 330 aa13.22□□□□□ -0.29
COMMD4-220ENST00000567720 RANGRFQ9HD47 186 aaPredicted RBP13.22□□□□□ -0.29
COMMD4-220ENST00000567720 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.22□□□□□ -0.29
COMMD4-220ENST00000567720 TRAV6A0A075B6T7 132 aa13.21□□□□□ -0.29
COMMD4-220ENST00000567720 PPP5D1E7EU14 171 aa13.21□□□□□ -0.29
COMMD4-220ENST00000567720 SMCO1Q147U7 214 aa13.21□□□□□ -0.29
COMMD4-220ENST00000567720 OR52B4Q8NGK2 314 aa13.21□□□□□ -0.29
COMMD4-220ENST00000567720 OR52E5Q8NH55 327 aa13.21□□□□□ -0.29
COMMD4-220ENST00000567720 EEF1AKMT3Q96AZ1 226 aa13.21□□□□□ -0.29
COMMD4-220ENST00000567720 K7EIM0 57 aa13.2□□□□□ -0.3
COMMD4-220ENST00000567720 OVOL1O14753 267 aa13.2□□□□□ -0.3
COMMD4-220ENST00000567720 DUS4LO95620 317 aaKnown RBP13.2□□□□□ -0.3
COMMD4-220ENST00000567720 ZP3P21754 424 aa13.2□□□□□ -0.3
COMMD4-220ENST00000567720 SPCS3P61009 180 aa13.2□□□□□ -0.3
COMMD4-220ENST00000567720 C4orf46Q504U0 113 aa13.2□□□□□ -0.3
COMMD4-220ENST00000567720 SLC25A24Q6NUK1 477 aa13.2□□□□□ -0.3
COMMD4-220ENST00000567720 MZT2BQ6NZ67 158 aa13.2□□□□□ -0.3
COMMD4-220ENST00000567720 ZNF502Q8TBZ5 544 aa13.2□□□□□ -0.3
COMMD4-220ENST00000567720 IGHV3-21A0A0B4J1V1 117 aa13.19□□□□□ -0.3
COMMD4-220ENST00000567720 PIGBOS1A0A0B4J2F0 54 aa13.19□□□□□ -0.3
COMMD4-220ENST00000567720 FAM240BA0A1B0GVZ2 78 aa13.19□□□□□ -0.3
COMMD4-220ENST00000567720 SEC14L6B5MCN3 397 aa13.19□□□□□ -0.3
COMMD4-220ENST00000567720 CYB5BO43169 146 aa13.19□□□□□ -0.3
COMMD4-220ENST00000567720 HOXB5P09067 269 aa13.19□□□□□ -0.3
COMMD4-220ENST00000567720 RNASE2P10153 161 aaKnown RBP13.19□□□□□ -0.3
COMMD4-220ENST00000567720 ERHP84090 104 aaKnown RBP13.19□□□□□ -0.3
COMMD4-220ENST00000567720 BSXQ3C1V8 233 aa13.19□□□□□ -0.3
COMMD4-220ENST00000567720 CLEC19AQ6UXS0 136 aa13.19□□□□□ -0.3
COMMD4-220ENST00000567720 OR1L6Q8NGR2 347 aa13.19□□□□□ -0.3
COMMD4-220ENST00000567720 CXorf58Q96LI9 332 aa13.19□□□□□ -0.3
COMMD4-220ENST00000567720 MCRIP2Q9BUT9 160 aaKnown RBP13.19□□□□□ -0.3
COMMD4-220ENST00000567720 THYN1Q9P016 225 aa13.19□□□□□ -0.3
COMMD4-220ENST00000567720 HSPB7Q9UBY9 170 aa13.19□□□□□ -0.3
COMMD4-220ENST00000567720 TMED3Q9Y3Q3 217 aa13.19□□□□□ -0.3
COMMD4-220ENST00000567720 A0A1B0GU03 582 aa13.18□□□□□ -0.3
COMMD4-220ENST00000567720 F8W735 103 aaPredicted RBP13.18□□□□□ -0.3
COMMD4-220ENST00000567720 WIPF1O43516 503 aa13.18□□□□□ -0.3
COMMD4-220ENST00000567720 PITX3O75364 302 aa13.18□□□□□ -0.3
COMMD4-220ENST00000567720 ADAP1O75689 374 aa13.18□□□□□ -0.3
COMMD4-220ENST00000567720 GPR183P32249 361 aa13.18□□□□□ -0.3
COMMD4-220ENST00000567720 TNFRSF9Q07011 255 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms