RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 SPAG8Q99932 426 aaPredicted RBP13.99□□□□□ -0.17
LINC01238-205ENST00000567549 EHFQ9NZC4 300 aa13.99□□□□□ -0.17
LINC01238-205ENST00000567549 IGLC7A0M8Q6 106 aa13.98□□□□□ -0.17
LINC01238-205ENST00000567549 RBMY1BA6NDE4 496 aaKnown RBP13.98□□□□□ -0.17
LINC01238-205ENST00000567549 RBMY1EA6NEQ0 496 aaKnown RBP13.98□□□□□ -0.17
LINC01238-205ENST00000567549 MARCH11A6NNE9 402 aa13.98□□□□□ -0.17
LINC01238-205ENST00000567549 CENPXA8MT69 81 aa13.98□□□□□ -0.17
LINC01238-205ENST00000567549 RBMY1DP0C7P1 496 aaKnown RBP13.98□□□□□ -0.17
LINC01238-205ENST00000567549 GPR183P32249 361 aa13.98□□□□□ -0.17
LINC01238-205ENST00000567549 APOC4P55056 127 aa13.98□□□□□ -0.17
LINC01238-205ENST00000567549 AP3S2P59780 193 aa13.98□□□□□ -0.17
LINC01238-205ENST00000567549 LPCAT3Q6P1A2 487 aa13.98□□□□□ -0.17
LINC01238-205ENST00000567549 ZNF818PQ6ZRF7 136 aa13.98□□□□□ -0.17
LINC01238-205ENST00000567549 LSM10Q969L4 123 aaKnown RBP13.98□□□□□ -0.17
LINC01238-205ENST00000567549 TMEM56Q96MV1 263 aa13.98□□□□□ -0.17
LINC01238-205ENST00000567549 C7orf50Q9BRJ6 194 aaKnown RBP13.98□□□□□ -0.17
LINC01238-205ENST00000567549 SCPEP1Q9HB40 452 aa13.98□□□□□ -0.17
LINC01238-205ENST00000567549 DAZ1Q9NQZ3 744 aaKnown RBP13.98□□□□□ -0.17
LINC01238-205ENST00000567549 MLXQ9UH92 298 aa13.98□□□□□ -0.17
LINC01238-205ENST00000567549 TBC1D24Q9ULP9 559 aa13.98□□□□□ -0.17
LINC01238-205ENST00000567549 A0A1B0GW64 132 aa13.97□□□□□ -0.17
LINC01238-205ENST00000567549 MFSD2BA6NFX1 497 aa13.97□□□□□ -0.17
LINC01238-205ENST00000567549 TGOLN2O43493 480 aa13.97□□□□□ -0.17
LINC01238-205ENST00000567549 SCAF4O95104 1147 aaKnown RBP13.97□□□□□ -0.17
LINC01238-205ENST00000567549 C8orf88P0DMB2 117 aa13.97□□□□□ -0.17
LINC01238-205ENST00000567549 F2RP25116 425 aa13.97□□□□□ -0.17
LINC01238-205ENST00000567549 PRSS3P35030 304 aa13.97□□□□□ -0.17
LINC01238-205ENST00000567549 SSBP1Q04837 148 aaKnown RBP13.97□□□□□ -0.17
LINC01238-205ENST00000567549 ZNF585BQ52M93 769 aa13.97□□□□□ -0.17
LINC01238-205ENST00000567549 DHRS11Q6UWP2 260 aa13.97□□□□□ -0.17
LINC01238-205ENST00000567549 BTNL8Q6UX41 500 aa13.97□□□□□ -0.17
LINC01238-205ENST00000567549 OR2C3Q8N628 320 aa13.97□□□□□ -0.17
LINC01238-205ENST00000567549 OR5H2Q8NGV7 314 aa13.97□□□□□ -0.17
LINC01238-205ENST00000567549 DEDD2Q8WXF8 326 aa13.97□□□□□ -0.17
LINC01238-205ENST00000567549 CACNG8Q8WXS5 425 aa13.97□□□□□ -0.17
LINC01238-205ENST00000567549 GPHA2Q96T91 129 aa13.97□□□□□ -0.17
LINC01238-205ENST00000567549 FAM110AQ9BQ89 295 aa13.97□□□□□ -0.17
LINC01238-205ENST00000567549 C5orf66Q9H5L9 145 aa13.97□□□□□ -0.17
LINC01238-205ENST00000567549 RETNQ9HD89 108 aa13.97□□□□□ -0.17
LINC01238-205ENST00000567549 PRNDQ9UKY0 176 aa13.97□□□□□ -0.17
LINC01238-205ENST00000567549 S4R3C0 116 aa13.97□□□□□ -0.17
LINC01238-205ENST00000567549 UBE2CO00762 179 aa13.96□□□□□ -0.17
LINC01238-205ENST00000567549 PLA2G10O15496 165 aa13.96□□□□□ -0.17
LINC01238-205ENST00000567549 S1PR2O95136 353 aa13.96□□□□□ -0.17
LINC01238-205ENST00000567549 SERPINE2P07093 398 aa13.96□□□□□ -0.17
LINC01238-205ENST00000567549 OR13C7P0DN81 318 aa13.96□□□□□ -0.17
LINC01238-205ENST00000567549 SLC25A24Q6NUK1 477 aa13.96□□□□□ -0.17
LINC01238-205ENST00000567549 C19orf35Q6ZS72 473 aa13.96□□□□□ -0.17
LINC01238-205ENST00000567549 TOMM5Q8N4H5 51 aa13.96□□□□□ -0.17
LINC01238-205ENST00000567549 OR6F1Q8NGZ6 308 aa13.96□□□□□ -0.17
LINC01238-205ENST00000567549 OR5B3Q8NH48 314 aa13.96□□□□□ -0.17
LINC01238-205ENST00000567549 TRIM63Q969Q1 353 aa13.96□□□□□ -0.17
LINC01238-205ENST00000567549 ZNF436Q9C0F3 470 aaPredicted RBP13.96□□□□□ -0.17
LINC01238-205ENST00000567549 LINC00854A0A1B0GVQ3 168 aa13.95□□□□□ -0.18
LINC01238-205ENST00000567549 RLN1P04808 185 aa13.95□□□□□ -0.18
LINC01238-205ENST00000567549 TM4SF20Q53R12 229 aa13.95□□□□□ -0.18
LINC01238-205ENST00000567549 OR52I2Q8NH67 350 aa13.95□□□□□ -0.18
LINC01238-205ENST00000567549 MOB3AQ96BX8 217 aa13.95□□□□□ -0.18
LINC01238-205ENST00000567549 ZNF2Q9BSG1 426 aaPredicted RBP13.95□□□□□ -0.18
LINC01238-205ENST00000567549 WFDC10AQ9H1F0 79 aa13.95□□□□□ -0.18
LINC01238-205ENST00000567549 FAM212BQ9NTI7 297 aaPredicted RBP13.95□□□□□ -0.18
LINC01238-205ENST00000567549 TP53TG1Q9Y2A0 90 aa13.95□□□□□ -0.18
LINC01238-205ENST00000567549 OR4C46A6NHA9 309 aa13.94□□□□□ -0.18
LINC01238-205ENST00000567549 CGB1A6NKQ9 187 aa13.94□□□□□ -0.18
LINC01238-205ENST00000567549 GPR31O00270 319 aa13.94□□□□□ -0.18
LINC01238-205ENST00000567549 NDUFA4O00483 81 aa13.94□□□□□ -0.18
LINC01238-205ENST00000567549 LYRM1O43325 122 aa13.94□□□□□ -0.18
LINC01238-205ENST00000567549 PTHLHP12272 177 aa13.94□□□□□ -0.18
LINC01238-205ENST00000567549 GNRHRP30968 328 aa13.94□□□□□ -0.18
LINC01238-205ENST00000567549 CMC4P56277 68 aaPredicted RBP13.94□□□□□ -0.18
LINC01238-205ENST00000567549 TMEM190Q8WZ59 177 aa13.94□□□□□ -0.18
LINC01238-205ENST00000567549 HINT2Q9BX68 163 aa13.94□□□□□ -0.18
LINC01238-205ENST00000567549 C21orf62Q9NYP8 219 aa13.94□□□□□ -0.18
LINC01238-205ENST00000567549 MTFP1Q9UDX5 166 aa13.94□□□□□ -0.18
LINC01238-205ENST00000567549 F11RQ9Y624 299 aaKnown RBP13.94□□□□□ -0.18
LINC01238-205ENST00000567549 RYR2Q92736 4967 aa13.94□□□□□ -0.18
LINC01238-205ENST00000567549 NAP1L6A6NFF2 107 aa13.93□□□□□ -0.18
LINC01238-205ENST00000567549 TSPAN4O14817 238 aa13.93□□□□□ -0.18
LINC01238-205ENST00000567549 PGLYRP1O75594 196 aaPredicted RBP13.93□□□□□ -0.18
LINC01238-205ENST00000567549 BMI1P35226 326 aa13.93□□□□□ -0.18
LINC01238-205ENST00000567549 RELQ04864 619 aaPredicted RBP13.93□□□□□ -0.18
LINC01238-205ENST00000567549 Q6ZWC4 215 aa13.93□□□□□ -0.18
LINC01238-205ENST00000567549 TMEM217Q8N7C4 229 aa13.93□□□□□ -0.18
LINC01238-205ENST00000567549 ENKURQ8TC29 256 aa13.93□□□□□ -0.18
LINC01238-205ENST00000567549 GPX8Q8TED1 209 aa13.93□□□□□ -0.18
LINC01238-205ENST00000567549 NDUFA4L2Q9NRX3 87 aa13.93□□□□□ -0.18
LINC01238-205ENST00000567549 OR51B2Q9Y5P1 312 aa13.93□□□□□ -0.18
LINC01238-205ENST00000567549 TRAV3A0A0B4J244 114 aa13.92□□□□□ -0.18
LINC01238-205ENST00000567549 TEX50A0A1B0GTY4 177 aa13.92□□□□□ -0.18
LINC01238-205ENST00000567549 A0A1B0GVG6 124 aa13.92□□□□□ -0.18
LINC01238-205ENST00000567549 FAM240BA0A1B0GVZ2 78 aa13.92□□□□□ -0.18
LINC01238-205ENST00000567549 K7EMT4 169 aa13.92□□□□□ -0.18
LINC01238-205ENST00000567549 KRASP01116 189 aa13.92□□□□□ -0.18
LINC01238-205ENST00000567549 FCER2P06734 321 aa13.92□□□□□ -0.18
LINC01238-205ENST00000567549 LPAR6P43657 344 aa13.92□□□□□ -0.18
LINC01238-205ENST00000567549 RFX2P48378 723 aa13.92□□□□□ -0.18
LINC01238-205ENST00000567549 TSPAN5P62079 268 aa13.92□□□□□ -0.18
LINC01238-205ENST00000567549 UNQ9165/PRO28630Q6UXU0 137 aa13.92□□□□□ -0.18
LINC01238-205ENST00000567549 NRARPQ7Z6K4 114 aa13.92□□□□□ -0.18
LINC01238-205ENST00000567549 DUSP18Q8NEJ0 188 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms