RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 CMTM5Q96DZ9 223 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 IMP4Q96G21 291 aaKnown RBP-0.18□□□□□ -2.44
CDH1-211ENST00000567320 SERPINI1Q99574 410 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 LIMD2Q9BT23 127 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 DERL1Q9BUN8 251 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 TMEM147Q9BVK8 224 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 OR51V1Q9H2C8 321 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 MIXL1Q9H2W2 232 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 EFCAB1Q9HAE3 211 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 SPACA1Q9HBV2 294 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 XPNPEP1Q9NQW7 623 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 TAS2R7Q9NYW3 318 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 COMMD9Q9P000 198 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 EPDR1Q9UM22 224 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 CHCHD2Q9Y6H1 151 aaPredicted RBP-0.18□□□□□ -2.44
CDH1-211ENST00000567320 PXMP4Q9Y6I8 212 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 RIMBP3CA6NJZ7 1639 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 RIMBP3BA6NNM3 1639 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 RIMBP3Q9UFD9 1639 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 NEO1Q92859 1461 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 TNXBP22105 4242 aa-0.18□□□□□ -2.44
CDH1-211ENST00000567320 LRPPRCP42704 1394 aaKnown RBP-0.19□□□□□ -2.44
CDH1-211ENST00000567320 ROBO3Q96MS0 1386 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 PIK3R4Q99570 1358 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 MED1Q15648 1581 aaPredicted RBP-0.19□□□□□ -2.44
CDH1-211ENST00000567320 COL7A1Q02388 2944 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 WRNQ14191 1432 aaPredicted RBP eCLIP-0.19□□□□□ -2.44
CDH1-211ENST00000567320 RIC1Q4ADV7 1423 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 ERBINQ96RT1 1412 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 TAF1LQ8IZX4 1826 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 HEATR5AQ86XA9 2040 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 DOCK3Q8IZD9 2030 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 LOC100506127A0A0U1RQW1 187 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 DAPL1A0PJW8 107 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 C5orf49A4QMS7 147 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 TLCD2A6NGC4 264 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 OR2T8A6NH00 312 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 GOLGA6L10A6NI86 522 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 IQCF5A8MTL0 148 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 FABP5P3A8MUU1 101 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 C5orf67F2Z3F1 127 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 CCRL2O00421 344 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 CCL16O15467 120 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 OR2J2O76002 312 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 UBL3O95164 117 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 OR5F1O95221 314 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 KRT75O95678 551 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 FADS2O95864 444 aaKnown RBP-0.19□□□□□ -2.44
CDH1-211ENST00000567320 IGLV3-1P01715 115 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 CD3DP04234 171 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 CD2P06729 351 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 SRP19P09132 144 aaKnown RBP-0.19□□□□□ -2.44
CDH1-211ENST00000567320 METTL15P1P0C7V9 234 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 FGF6P10767 208 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 NQO2P16083 231 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 PVALBP20472 110 aaPredicted RBP-0.19□□□□□ -2.44
CDH1-211ENST00000567320 HIST1H2BOP23527 126 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 CFL1P23528 166 aaKnown RBP-0.19□□□□□ -2.44
CDH1-211ENST00000567320 CALRP27797 417 aaKnown RBP-0.19□□□□□ -2.44
CDH1-211ENST00000567320 HIST1H2BBP33778 126 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 KDELR2P33947 212 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 HAAOP46952 286 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 KCNJ3P48549 501 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 FXYD2P54710 66 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 HIST1H2BDP58876 126 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 DEFA3P59666 94 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 RPS20P60866 119 aaKnown RBP-0.19□□□□□ -2.44
CDH1-211ENST00000567320 CDC42P60953 191 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 HIST1H2BCP62807 126 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 RHOGP84095 191 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 RPL18Q07020 188 aaKnown RBP-0.19□□□□□ -2.44
CDH1-211ENST00000567320 PMS2P3Q13401 168 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 PPP1R1AQ13522 171 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 RSU1Q15404 277 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 NDUFA5Q16718 116 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 HIST2H2BEQ16778 126 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 CLEC12BQ2HXU8 276 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 KRTAP19-7Q3SYF9 63 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 Q3ZCU0 254 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 LINC01554Q52M75 96 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 KHDC3LQ587J8 217 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 FBXO48Q5FWF7 155 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 COQ5Q5HYK3 327 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 HIST2H2BFQ5QNW6 126 aaPredicted RBP-0.19□□□□□ -2.44
CDH1-211ENST00000567320 RBM48Q5RL73 367 aaKnown RBP-0.19□□□□□ -2.44
CDH1-211ENST00000567320 FAM45BPQ6NSW5 357 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 SFXN4Q6P4A7 337 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 TEX261Q6UWH6 196 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 Q6ZS49 121 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 MIR17HGQ75NE6 70 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 COPS6Q7L5N1 327 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 AAED1Q7RTV5 226 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 FUNDC1Q8IVP5 155 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 ST13P4Q8IZP2 240 aaPredicted RBP-0.19□□□□□ -2.44
CDH1-211ENST00000567320 EXOC3-AS1Q8N2X6 119 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 Q8N402 240 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 TBC1D19Q8N5T2 526 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 TMEM86BQ8N661 226 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 DEFB125Q8N687 156 aa-0.19□□□□□ -2.44
CDH1-211ENST00000567320 SIGLECL1Q8N7X8 197 aa-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms