RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 MSMO1Q15800 293 aa11.29□□□□□ -0.6
PALB2-205ENST00000567003 TBCEQ15813 527 aaPredicted RBP11.29□□□□□ -0.6
PALB2-205ENST00000567003 AADACL3Q5VUY0 350 aa11.29□□□□□ -0.6
PALB2-205ENST00000567003 LEMD1Q68G75 181 aa11.29□□□□□ -0.6
PALB2-205ENST00000567003 TMEM17Q86X19 198 aa11.29□□□□□ -0.6
PALB2-205ENST00000567003 BEST4Q8NFU0 473 aa11.29□□□□□ -0.6
PALB2-205ENST00000567003 OR1L8Q8NGR8 309 aa11.29□□□□□ -0.6
PALB2-205ENST00000567003 NRG4Q8WWG1 115 aa11.29□□□□□ -0.6
PALB2-205ENST00000567003 DAPK2Q9UIK4 370 aa11.29□□□□□ -0.6
PALB2-205ENST00000567003 AGRNO00468 2067 aa11.29□□□□□ -0.6
PALB2-205ENST00000567003 A0A1B0GVY2 172 aa11.28□□□□□ -0.6
PALB2-205ENST00000567003 CYB5BO43169 146 aa11.28□□□□□ -0.6
PALB2-205ENST00000567003 YIF1AO95070 293 aa11.28□□□□□ -0.6
PALB2-205ENST00000567003 IGHV3-48P01763 117 aa11.28□□□□□ -0.6
PALB2-205ENST00000567003 CTSGP08311 255 aa11.28□□□□□ -0.6
PALB2-205ENST00000567003 FAM24BQ8N5W8 94 aa11.28□□□□□ -0.6
PALB2-205ENST00000567003 NDUFA4L2Q9NRX3 87 aa11.28□□□□□ -0.6
PALB2-205ENST00000567003 NOTOA8MTQ0 251 aa11.27□□□□□ -0.61
PALB2-205ENST00000567003 NUPL2O15504 423 aaKnown RBP11.27□□□□□ -0.61
PALB2-205ENST00000567003 TMEM187Q14656 261 aa11.27□□□□□ -0.61
PALB2-205ENST00000567003 FAM90A2PQ658T7 463 aa11.27□□□□□ -0.61
PALB2-205ENST00000567003 HOGA1Q86XE5 327 aa11.27□□□□□ -0.61
PALB2-205ENST00000567003 Q8NAQ8 132 aa11.27□□□□□ -0.61
PALB2-205ENST00000567003 ZBTB34Q8NCN2 500 aa11.27□□□□□ -0.61
PALB2-205ENST00000567003 LSM10Q969L4 123 aaKnown RBP11.27□□□□□ -0.61
PALB2-205ENST00000567003 PLEKHA2Q9HB19 425 aa11.27□□□□□ -0.61
PALB2-205ENST00000567003 RHBDL2Q9NX52 303 aa11.27□□□□□ -0.61
PALB2-205ENST00000567003 COMMD9Q9P000 198 aa11.27□□□□□ -0.61
PALB2-205ENST00000567003 OR51B2Q9Y5P1 312 aa11.27□□□□□ -0.61
PALB2-205ENST00000567003 TRAV18A0A075B6X5 111 aa11.26□□□□□ -0.61
PALB2-205ENST00000567003 IGHV3-66A0A0C4DH42 116 aa11.26□□□□□ -0.61
PALB2-205ENST00000567003 MEIS3P1A6NDR6 274 aa11.26□□□□□ -0.61
PALB2-205ENST00000567003 DBX1A6NMT0 343 aa11.26□□□□□ -0.61
PALB2-205ENST00000567003 MARCH11A6NNE9 402 aa11.26□□□□□ -0.61
PALB2-205ENST00000567003 RBMY1A1P0DJD3 496 aaKnown RBP11.26□□□□□ -0.61
PALB2-205ENST00000567003 RBMY1CP0DJD4 496 aa11.26□□□□□ -0.61
PALB2-205ENST00000567003 TCTAP57738 103 aa11.26□□□□□ -0.61
PALB2-205ENST00000567003 DEFB131AP59861 70 aa11.26□□□□□ -0.61
PALB2-205ENST00000567003 ERVK-16P61578 105 aa11.26□□□□□ -0.61
PALB2-205ENST00000567003 RBMY1FQ15415 496 aaKnown RBP11.26□□□□□ -0.61
PALB2-205ENST00000567003 THOC7Q6I9Y2 204 aaKnown RBP11.26□□□□□ -0.61
PALB2-205ENST00000567003 TCF24Q7RTU0 167 aa11.26□□□□□ -0.61
PALB2-205ENST00000567003 LILRB2Q8N423 598 aa11.26□□□□□ -0.61
PALB2-205ENST00000567003 OR5H6Q8NGV6 325 aa11.26□□□□□ -0.61
PALB2-205ENST00000567003 GIMAP1Q8WWP7 306 aa11.26□□□□□ -0.61
PALB2-205ENST00000567003 RRP15Q9Y3B9 282 aaKnown RBP11.26□□□□□ -0.61
PALB2-205ENST00000567003 IGHV4-28A0A0C4DH34 117 aa11.25□□□□□ -0.61
PALB2-205ENST00000567003 ANKRD65E5RJM6 399 aa11.25□□□□□ -0.61
PALB2-205ENST00000567003 MRPS14O60783 128 aaKnown RBP11.25□□□□□ -0.61
PALB2-205ENST00000567003 APOHP02749 345 aaPredicted RBP11.25□□□□□ -0.61
PALB2-205ENST00000567003 RLN1P04808 185 aa11.25□□□□□ -0.61
PALB2-205ENST00000567003 HLA-DMBP28068 263 aa11.25□□□□□ -0.61
PALB2-205ENST00000567003 G6PCP35575 357 aa11.25□□□□□ -0.61
PALB2-205ENST00000567003 Q6ZTC4 211 aa11.25□□□□□ -0.61
PALB2-205ENST00000567003 HSD17B13Q7Z5P4 300 aaPredicted RBP11.25□□□□□ -0.61
PALB2-205ENST00000567003 ST8SIA2Q92186 375 aa11.25□□□□□ -0.61
PALB2-205ENST00000567003 SLC25A46Q96AG3 418 aa11.25□□□□□ -0.61
PALB2-205ENST00000567003 SLC25A38Q96DW6 304 aa11.25□□□□□ -0.61
PALB2-205ENST00000567003 MISP3Q96FF7 219 aa11.25□□□□□ -0.61
PALB2-205ENST00000567003 ATP6V0BQ99437 205 aa11.25□□□□□ -0.61
PALB2-205ENST00000567003 TXNL4BQ9NX01 149 aaKnown RBP11.25□□□□□ -0.61
PALB2-205ENST00000567003 IGHV4-4A0A075B6R2 117 aa11.24□□□□□ -0.61
PALB2-205ENST00000567003 TRAV14DV4A0A0A6YYC5 116 aa11.24□□□□□ -0.61
PALB2-205ENST00000567003 SCGNO76038 276 aa11.24□□□□□ -0.61
PALB2-205ENST00000567003 KRASP01116 189 aa11.24□□□□□ -0.61
PALB2-205ENST00000567003 FGF2P09038 288 aa11.24□□□□□ -0.61
PALB2-205ENST00000567003 GIG44P09565 113 aaPredicted RBP11.24□□□□□ -0.61
PALB2-205ENST00000567003 CLEC2LP0C7M8 214 aa11.24□□□□□ -0.61
PALB2-205ENST00000567003 GNRHRP30968 328 aa11.24□□□□□ -0.61
PALB2-205ENST00000567003 LPAR6P43657 344 aa11.24□□□□□ -0.61
PALB2-205ENST00000567003 CMC4P56277 68 aaPredicted RBP11.24□□□□□ -0.61
PALB2-205ENST00000567003 RELQ04864 619 aaPredicted RBP11.24□□□□□ -0.61
PALB2-205ENST00000567003 SFXN4Q6P4A7 337 aa11.24□□□□□ -0.61
PALB2-205ENST00000567003 FCAMRQ8WWV6 532 aa11.24□□□□□ -0.61
PALB2-205ENST00000567003 OR10C1Q96KK4 312 aa11.24□□□□□ -0.61
PALB2-205ENST00000567003 CMTM3Q96MX0 182 aa11.24□□□□□ -0.61
PALB2-205ENST00000567003 MS4A6AQ9H2W1 248 aa11.24□□□□□ -0.61
PALB2-205ENST00000567003 C15orf61A6NNL5 157 aa11.23□□□□□ -0.61
PALB2-205ENST00000567003 C11orf94C9JXX5 98 aa11.23□□□□□ -0.61
PALB2-205ENST00000567003 I3L2K1 104 aa11.23□□□□□ -0.61
PALB2-205ENST00000567003 ST8SIA3O43173 380 aa11.23□□□□□ -0.61
PALB2-205ENST00000567003 HERV-K104P61576 105 aa11.23□□□□□ -0.61
PALB2-205ENST00000567003 LINC00336Q6ZUF6 198 aa11.23□□□□□ -0.61
PALB2-205ENST00000567003 ZNF767PQ75MW2 155 aa11.23□□□□□ -0.61
PALB2-205ENST00000567003 DGCR14Q96DF8 476 aaKnown RBP11.23□□□□□ -0.61
PALB2-205ENST00000567003 CNBD2Q96M20 576 aa11.23□□□□□ -0.61
PALB2-205ENST00000567003 ELOA3CA0A087WX78 387 aaPredicted RBP11.22□□□□□ -0.61
PALB2-205ENST00000567003 M0R2N4 97 aa11.22□□□□□ -0.61
PALB2-205ENST00000567003 DNASE2O00115 360 aaPredicted RBP11.22□□□□□ -0.61
PALB2-205ENST00000567003 PGLYRP1O75594 196 aaPredicted RBP11.22□□□□□ -0.61
PALB2-205ENST00000567003 SNAPC5O75971 98 aa11.22□□□□□ -0.61
PALB2-205ENST00000567003 DFFBO76075 338 aa11.22□□□□□ -0.61
PALB2-205ENST00000567003 MT-CO2P00403 227 aa11.22□□□□□ -0.61
PALB2-205ENST00000567003 C4BPBP20851 252 aa11.22□□□□□ -0.61
PALB2-205ENST00000567003 F2RP25116 425 aa11.22□□□□□ -0.61
PALB2-205ENST00000567003 SMCPP49901 116 aaPredicted RBP11.22□□□□□ -0.61
PALB2-205ENST00000567003 MFAP4P55083 255 aa11.22□□□□□ -0.61
PALB2-205ENST00000567003 MXD1Q05195 221 aa11.22□□□□□ -0.61
PALB2-205ENST00000567003 TOMM20LQ6UXN7 152 aa11.22□□□□□ -0.61
PALB2-205ENST00000567003 OR1P1Q8NH06 330 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms