RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 OR4P4Q8NGL7 312 aa15.17■□□□□ 0.02
MSLN-207ENST00000566549 FRZBQ92765 325 aa15.17■□□□□ 0.02
MSLN-207ENST00000566549 RITA1Q96K30 269 aa15.17■□□□□ 0.02
MSLN-207ENST00000566549 FKBP11Q9NYL4 201 aa15.17■□□□□ 0.02
MSLN-207ENST00000566549 YTHDF2Q9Y5A9 579 aaKnown RBP15.17■□□□□ 0.02
MSLN-207ENST00000566549 SPTBN4Q9H254 2564 aa15.17■□□□□ 0.02
MSLN-207ENST00000566549 TACC2O95359 2948 aa15.17■□□□□ 0.02
MSLN-207ENST00000566549 RNASE2P10153 161 aaKnown RBP15.17■□□□□ 0.02
MSLN-207ENST00000566549 HNF1AP20823 631 aa15.17■□□□□ 0.02
MSLN-207ENST00000566549 RPL29P47914 159 aaKnown RBP15.17■□□□□ 0.02
MSLN-207ENST00000566549 RHOBP62745 196 aa15.17■□□□□ 0.02
MSLN-207ENST00000566549 GAMTQ14353 236 aa15.17■□□□□ 0.02
MSLN-207ENST00000566549 TMEM177Q53S58 311 aa15.17■□□□□ 0.02
MSLN-207ENST00000566549 PDZD11Q5EBL8 140 aa15.17■□□□□ 0.02
MSLN-207ENST00000566549 MIR17HGQ75NE6 70 aa15.17■□□□□ 0.02
MSLN-207ENST00000566549 TGIF2LXQ8IUE1 241 aa15.17■□□□□ 0.02
MSLN-207ENST00000566549 OR4C13Q8NGP0 309 aa15.17■□□□□ 0.02
MSLN-207ENST00000566549 TPSG1Q9NRR2 321 aa15.17■□□□□ 0.02
MSLN-207ENST00000566549 SCO2A0A1W2PP80 73 aa15.16■□□□□ 0.02
MSLN-207ENST00000566549 ENSAO43768 121 aaKnown RBP15.16■□□□□ 0.02
MSLN-207ENST00000566549 IGHV3-48P01763 117 aa15.16■□□□□ 0.02
MSLN-207ENST00000566549 S100A9P06702 114 aaKnown RBP15.16■□□□□ 0.02
MSLN-207ENST00000566549 CA7P43166 264 aa15.16■□□□□ 0.02
MSLN-207ENST00000566549 PRR20EP86478 221 aa15.16■□□□□ 0.02
MSLN-207ENST00000566549 PRR20CP86479 221 aa15.16■□□□□ 0.02
MSLN-207ENST00000566549 PRR20DP86480 221 aa15.16■□□□□ 0.02
MSLN-207ENST00000566549 PRR20BP86481 221 aa15.16■□□□□ 0.02
MSLN-207ENST00000566549 PRR20AP86496 221 aa15.16■□□□□ 0.02
MSLN-207ENST00000566549 ZNF114Q8NC26 417 aa15.16■□□□□ 0.02
MSLN-207ENST00000566549 OR9G1Q8NH87 305 aa15.16■□□□□ 0.02
MSLN-207ENST00000566549 TMEM186Q96B77 213 aa15.16■□□□□ 0.02
MSLN-207ENST00000566549 NDUFA4L2Q9NRX3 87 aa15.16■□□□□ 0.02
MSLN-207ENST00000566549 KAAG1Q9UBP8 84 aa15.16■□□□□ 0.02
MSLN-207ENST00000566549 DCHS2Q6V1P9 2916 aa15.16■□□□□ 0.02
MSLN-207ENST00000566549 S100A8P05109 93 aa15.16■□□□□ 0.02
MSLN-207ENST00000566549 LINC00869P0C866 280 aa15.16■□□□□ 0.02
MSLN-207ENST00000566549 TRGC1P0CF51 173 aa15.16■□□□□ 0.02
MSLN-207ENST00000566549 GCHFRP30047 84 aa15.16■□□□□ 0.02
MSLN-207ENST00000566549 OR10J1P30954 320 aa15.16■□□□□ 0.02
MSLN-207ENST00000566549 A0A1W2PPQ1 181 aa15.15■□□□□ 0.02
MSLN-207ENST00000566549 SLC25A17O43808 307 aa15.15■□□□□ 0.02
MSLN-207ENST00000566549 LY6HO94772 140 aa15.15■□□□□ 0.02
MSLN-207ENST00000566549 C2orf83Q53S99 150 aa15.15■□□□□ 0.02
MSLN-207ENST00000566549 GFI1BQ5VTD9 330 aa15.15■□□□□ 0.02
MSLN-207ENST00000566549 C11orf42Q8N5U0 333 aa15.15■□□□□ 0.02
MSLN-207ENST00000566549 OR2T6Q8NHC8 308 aa15.15■□□□□ 0.02
MSLN-207ENST00000566549 ST6GALNAC6Q969X2 333 aa15.15■□□□□ 0.02
MSLN-207ENST00000566549 ACY3Q96HD9 319 aa15.15■□□□□ 0.02
MSLN-207ENST00000566549 OR5B12Q96R08 314 aa15.15■□□□□ 0.02
MSLN-207ENST00000566549 ABCA4P78363 2273 aa15.15■□□□□ 0.02
MSLN-207ENST00000566549 TRBV24-1A0A075B6N3 115 aa15.15■□□□□ 0.02
MSLN-207ENST00000566549 PFN1P07737 140 aaKnown RBP15.15■□□□□ 0.02
MSLN-207ENST00000566549 TMEM249Q2WGJ8 235 aa15.15■□□□□ 0.02
MSLN-207ENST00000566549 LINC01551Q86U37 167 aa15.15■□□□□ 0.02
MSLN-207ENST00000566549 OR1L8Q8NGR8 309 aa15.15■□□□□ 0.02
MSLN-207ENST00000566549 ZNF430Q9H8G1 570 aaPredicted RBP15.15■□□□□ 0.02
MSLN-207ENST00000566549 SLC45A2Q9UMX9 530 aa15.15■□□□□ 0.02
MSLN-207ENST00000566549 WASHC3Q9Y3C0 194 aa15.15■□□□□ 0.02
MSLN-207ENST00000566549 C1QTNF9P0C862 333 aa15.14■□□□□ 0.01
MSLN-207ENST00000566549 NHLH1Q02575 133 aa15.14■□□□□ 0.01
MSLN-207ENST00000566549 TMEM144Q7Z5S9 345 aa15.14■□□□□ 0.01
MSLN-207ENST00000566549 PDPNQ86YL7 162 aa15.14■□□□□ 0.01
MSLN-207ENST00000566549 TRBV20OR9-2A0A075B6H5 130 aa15.14■□□□□ 0.01
MSLN-207ENST00000566549 IFITM10A6NMD0 228 aa15.14■□□□□ 0.01
MSLN-207ENST00000566549 REG1AP05451 166 aa15.14■□□□□ 0.01
MSLN-207ENST00000566549 S100PP25815 95 aa15.14■□□□□ 0.01
MSLN-207ENST00000566549 WT1-ASQ06250 92 aa15.14■□□□□ 0.01
MSLN-207ENST00000566549 PCGF1Q9BSM1 259 aa15.14■□□□□ 0.01
MSLN-207ENST00000566549 TMEM133Q9H2Q1 129 aa15.14■□□□□ 0.01
MSLN-207ENST00000566549 IGLV2-23P01705 113 aa15.13■□□□□ 0.01
MSLN-207ENST00000566549 HOXA5P20719 270 aa15.13■□□□□ 0.01
MSLN-207ENST00000566549 USF1P22415 310 aaPredicted RBP15.13■□□□□ 0.01
MSLN-207ENST00000566549 ERHP84090 104 aaKnown RBP15.13■□□□□ 0.01
MSLN-207ENST00000566549 LINC00311Q8N616 119 aa15.13■□□□□ 0.01
MSLN-207ENST00000566549 CGB1A6NKQ9 187 aa15.13■□□□□ 0.01
MSLN-207ENST00000566549 F6UZH7 168 aa15.13■□□□□ 0.01
MSLN-207ENST00000566549 SMIM6P0DI80 62 aa15.13■□□□□ 0.01
MSLN-207ENST00000566549 APELAP0DMC3 54 aa15.13■□□□□ 0.01
MSLN-207ENST00000566549 SSBP2P81877 361 aaPredicted RBP15.13■□□□□ 0.01
MSLN-207ENST00000566549 RALYQ9UKM9 306 aaKnown RBP15.13■□□□□ 0.01
MSLN-207ENST00000566549 VENTXO95231 258 aa15.12■□□□□ 0.01
MSLN-207ENST00000566549 CD69Q07108 199 aa15.12■□□□□ 0.01
MSLN-207ENST00000566549 TMEM167AQ8TBQ9 72 aa15.12■□□□□ 0.01
MSLN-207ENST00000566549 CHD8Q9HCK8 2581 aa15.12■□□□□ 0.01
MSLN-207ENST00000566549 COX7A1P24310 79 aa15.12■□□□□ 0.01
MSLN-207ENST00000566549 FAM3BP58499 235 aaPredicted RBP15.12■□□□□ 0.01
MSLN-207ENST00000566549 PSG5Q15238 335 aa15.12■□□□□ 0.01
MSLN-207ENST00000566549 VSTM2AQ8TAG5 236 aa15.12■□□□□ 0.01
MSLN-207ENST00000566549 ZNF596Q8TC21 504 aa15.12■□□□□ 0.01
MSLN-207ENST00000566549 NIT2Q9NQR4 276 aa15.12■□□□□ 0.01
MSLN-207ENST00000566549 MALRD1Q5VYJ5 2156 aa15.11■□□□□ 0.01
MSLN-207ENST00000566549 CDX1P47902 265 aaPredicted RBP15.11■□□□□ 0.01
MSLN-207ENST00000566549 KLRB1Q12918 225 aa15.11■□□□□ 0.01
MSLN-207ENST00000566549 ANAPC16Q96DE5 110 aa15.11■□□□□ 0.01
MSLN-207ENST00000566549 FUT9Q9Y231 359 aa15.11■□□□□ 0.01
MSLN-207ENST00000566549 FNDC10F2Z333 226 aa15.11■□□□□ 0.01
MSLN-207ENST00000566549 DLL1O00548 723 aa15.11■□□□□ 0.01
MSLN-207ENST00000566549 OR7C2O60412 319 aa15.11■□□□□ 0.01
MSLN-207ENST00000566549 SOD3P08294 240 aa15.11■□□□□ 0.01
MSLN-207ENST00000566549 CNTFRP26992 372 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms