RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 IZUMO4Q1ZYL8 232 aa11□□□□□ -0.65
FANCA-220ENST00000566409 RNASE10Q5GAN6 216 aaKnown RBP11□□□□□ -0.65
FANCA-220ENST00000566409 PLET1Q6UQ28 207 aa11□□□□□ -0.65
FANCA-220ENST00000566409 CHRDL1Q9BU40 450 aa11□□□□□ -0.65
FANCA-220ENST00000566409 EDA2RQ9HAV5 297 aa11□□□□□ -0.65
FANCA-220ENST00000566409 FKBP11Q9NYL4 201 aa11□□□□□ -0.65
FANCA-220ENST00000566409 IGKV1-5P01602 117 aa10.99□□□□□ -0.65
FANCA-220ENST00000566409 IFNA6P05013 189 aa10.99□□□□□ -0.65
FANCA-220ENST00000566409 P0C879 139 aa10.99□□□□□ -0.65
FANCA-220ENST00000566409 S100GP29377 79 aa10.99□□□□□ -0.65
FANCA-220ENST00000566409 ADMP35318 185 aa10.99□□□□□ -0.65
FANCA-220ENST00000566409 PIGPP57054 158 aa10.99□□□□□ -0.65
FANCA-220ENST00000566409 CASC10Q5T4H9 136 aa10.99□□□□□ -0.65
FANCA-220ENST00000566409 ZNF57Q68EA5 555 aaPredicted RBP10.99□□□□□ -0.65
FANCA-220ENST00000566409 H2BFWTQ7Z2G1 175 aa10.99□□□□□ -0.65
FANCA-220ENST00000566409 CLVS1Q8IUQ0 354 aaPredicted RBP10.99□□□□□ -0.65
FANCA-220ENST00000566409 ARRDC1Q8N5I2 433 aa10.99□□□□□ -0.65
FANCA-220ENST00000566409 OR2C3Q8N628 320 aa10.99□□□□□ -0.65
FANCA-220ENST00000566409 TP53RKQ96S44 253 aa10.99□□□□□ -0.65
FANCA-220ENST00000566409 TSC22D3Q99576 134 aa10.99□□□□□ -0.65
FANCA-220ENST00000566409 SLC2A8Q9NY64 477 aa10.99□□□□□ -0.65
FANCA-220ENST00000566409 OR11H12B2RN74 326 aa10.98□□□□□ -0.65
FANCA-220ENST00000566409 PGAM2P15259 253 aa10.98□□□□□ -0.65
FANCA-220ENST00000566409 TBPP20226 339 aa10.98□□□□□ -0.65
FANCA-220ENST00000566409 PPP5CP53041 499 aa10.98□□□□□ -0.65
FANCA-220ENST00000566409 ELLP55199 621 aaPredicted RBP10.98□□□□□ -0.65
FANCA-220ENST00000566409 BTNL8Q6UX41 500 aa10.98□□□□□ -0.65
FANCA-220ENST00000566409 TMEM229BQ8NBD8 167 aa10.98□□□□□ -0.65
FANCA-220ENST00000566409 OR1P1Q8NH06 330 aa10.98□□□□□ -0.65
FANCA-220ENST00000566409 OR4A16Q8NH70 328 aa10.98□□□□□ -0.65
FANCA-220ENST00000566409 TERB2Q8NHR7 220 aa10.98□□□□□ -0.65
FANCA-220ENST00000566409 DYNC2LI1Q8TCX1 351 aa10.98□□□□□ -0.65
FANCA-220ENST00000566409 TMEM190Q8WZ59 177 aa10.98□□□□□ -0.65
FANCA-220ENST00000566409 ZNF486Q96H40 463 aaPredicted RBP10.98□□□□□ -0.65
FANCA-220ENST00000566409 TMEM56Q96MV1 263 aa10.98□□□□□ -0.65
FANCA-220ENST00000566409 SPATA25Q9BR10 227 aa10.98□□□□□ -0.65
FANCA-220ENST00000566409 RETNQ9HD89 108 aa10.98□□□□□ -0.65
FANCA-220ENST00000566409 C21orf62Q9NYP8 219 aa10.98□□□□□ -0.65
FANCA-220ENST00000566409 CEPT1Q9Y6K0 416 aa10.98□□□□□ -0.65
FANCA-220ENST00000566409 SACSQ9NZJ4 4579 aa10.97□□□□□ -0.65
FANCA-220ENST00000566409 A0A0B4J293 547 aa10.97□□□□□ -0.65
FANCA-220ENST00000566409 GABARAPH6UMI1 98 aa10.97□□□□□ -0.65
FANCA-220ENST00000566409 RGS5O15539 181 aa10.97□□□□□ -0.65
FANCA-220ENST00000566409 CYB5BO43169 146 aa10.97□□□□□ -0.65
FANCA-220ENST00000566409 SCAF4O95104 1147 aaKnown RBP10.97□□□□□ -0.65
FANCA-220ENST00000566409 CTSGP08311 255 aa10.97□□□□□ -0.65
FANCA-220ENST00000566409 HSPE1P61604 102 aaKnown RBP10.97□□□□□ -0.65
FANCA-220ENST00000566409 PRCDQ00LT1 54 aa10.97□□□□□ -0.65
FANCA-220ENST00000566409 FAAP20Q6NZ36 180 aa10.97□□□□□ -0.65
FANCA-220ENST00000566409 C15orf40Q8WUR7 153 aa10.97□□□□□ -0.65
FANCA-220ENST00000566409 BSCL2Q96G97 398 aaPredicted RBP10.97□□□□□ -0.65
FANCA-220ENST00000566409 HIPK2Q9H2X6 1198 aa10.97□□□□□ -0.65
FANCA-220ENST00000566409 PALMDQ9NP74 551 aa10.97□□□□□ -0.65
FANCA-220ENST00000566409 MRPL27Q9P0M9 148 aaKnown RBP10.97□□□□□ -0.65
FANCA-220ENST00000566409 IGHV3OR16-8A0A075B7F1 116 aa10.96□□□□□ -0.65
FANCA-220ENST00000566409 I3L2K1 104 aa10.96□□□□□ -0.65
FANCA-220ENST00000566409 RAB3DO95716 219 aa10.96□□□□□ -0.65
FANCA-220ENST00000566409 TAS2R19P59542 299 aa10.96□□□□□ -0.65
FANCA-220ENST00000566409 SP6Q3SY56 376 aa10.96□□□□□ -0.65
FANCA-220ENST00000566409 SPINK9Q5DT21 86 aa10.96□□□□□ -0.65
FANCA-220ENST00000566409 STEAP1BQ6NZ63 245 aa10.96□□□□□ -0.65
FANCA-220ENST00000566409 SPSB3Q6PJ21 355 aa10.96□□□□□ -0.65
FANCA-220ENST00000566409 ZNF114Q8NC26 417 aa10.96□□□□□ -0.65
FANCA-220ENST00000566409 OR1L6Q8NGR2 347 aa10.96□□□□□ -0.65
FANCA-220ENST00000566409 OR13C8Q8NGS7 320 aa10.96□□□□□ -0.65
FANCA-220ENST00000566409 MARCH1Q8TCQ1 289 aa10.96□□□□□ -0.65
FANCA-220ENST00000566409 MARC2Q969Z3 335 aa10.96□□□□□ -0.65
FANCA-220ENST00000566409 ATP6V0BQ99437 205 aa10.96□□□□□ -0.65
FANCA-220ENST00000566409 SRD5A3Q9H8P0 318 aa10.96□□□□□ -0.65
FANCA-220ENST00000566409 UFC1Q9Y3C8 167 aa10.96□□□□□ -0.65
FANCA-220ENST00000566409 A0A0G2JRQ6 117 aa10.95□□□□□ -0.66
FANCA-220ENST00000566409 C3orf85A0A1B0GTC6 90 aa10.95□□□□□ -0.66
FANCA-220ENST00000566409 NDUFA4O00483 81 aa10.95□□□□□ -0.66
FANCA-220ENST00000566409 IGHV3-48P01763 117 aa10.95□□□□□ -0.66
FANCA-220ENST00000566409 TMBIM6P55061 237 aa10.95□□□□□ -0.66
FANCA-220ENST00000566409 SSBP1Q04837 148 aaKnown RBP10.95□□□□□ -0.66
FANCA-220ENST00000566409 SCGB2B2Q4G0G5 96 aa10.95□□□□□ -0.66
FANCA-220ENST00000566409 UBAC2Q8NBM4 344 aa10.95□□□□□ -0.66
FANCA-220ENST00000566409 RAB2BQ8WUD1 216 aa10.95□□□□□ -0.66
FANCA-220ENST00000566409 SMIM4Q8WVI0 70 aa10.95□□□□□ -0.66
FANCA-220ENST00000566409 RTBDNQ9BSG5 229 aaPredicted RBP10.95□□□□□ -0.66
FANCA-220ENST00000566409 TRAV25A0A0B4J276 109 aa10.94□□□□□ -0.66
FANCA-220ENST00000566409 ZNF207O43670 478 aaKnown RBP10.94□□□□□ -0.66
FANCA-220ENST00000566409 MT-CO2P00403 227 aa10.94□□□□□ -0.66
FANCA-220ENST00000566409 CTSDP07339 412 aaPredicted RBP10.94□□□□□ -0.66
FANCA-220ENST00000566409 LYL1P12980 280 aa10.94□□□□□ -0.66
FANCA-220ENST00000566409 UCP1P25874 307 aa10.94□□□□□ -0.66
FANCA-220ENST00000566409 Q56UQ5 140 aa10.94□□□□□ -0.66
FANCA-220ENST00000566409 Q6ZRM9 215 aa10.94□□□□□ -0.66
FANCA-220ENST00000566409 OR52B4Q8NGK2 314 aa10.94□□□□□ -0.66
FANCA-220ENST00000566409 ZFAND1Q8TCF1 268 aa10.94□□□□□ -0.66
FANCA-220ENST00000566409 MISP3Q96FF7 219 aa10.94□□□□□ -0.66
FANCA-220ENST00000566409 FAM110AQ9BQ89 295 aa10.94□□□□□ -0.66
FANCA-220ENST00000566409 SLIRPQ9GZT3 109 aaKnown RBP10.94□□□□□ -0.66
FANCA-220ENST00000566409 C5orf66Q9H5L9 145 aa10.94□□□□□ -0.66
FANCA-220ENST00000566409 DAZ1Q9NQZ3 744 aaKnown RBP10.94□□□□□ -0.66
FANCA-220ENST00000566409 CCDC59Q9P031 241 aaKnown RBP10.94□□□□□ -0.66
FANCA-220ENST00000566409 COPZ2Q9P299 210 aa10.94□□□□□ -0.66
FANCA-220ENST00000566409 DNAH1Q9P2D7 4330 aa10.93□□□□□ -0.66
FANCA-220ENST00000566409 CTDSPLO15194 276 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms