RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 OR11H2Q8NH07 326 aa2.47□□□□□ -2.01
CHD9-218ENST00000566029 TRAV8-4A0A0B4J246 113 aa2.47□□□□□ -2.01
CHD9-218ENST00000566029 CSN3P07498 182 aa2.47□□□□□ -2.01
CHD9-218ENST00000566029 ZNF83P51522 516 aa2.47□□□□□ -2.01
CHD9-218ENST00000566029 GFRA1P56159 465 aa2.47□□□□□ -2.01
CHD9-218ENST00000566029 OR10G3Q8NGC4 313 aa2.47□□□□□ -2.01
CHD9-218ENST00000566029 OR1L8Q8NGR8 309 aa2.47□□□□□ -2.01
CHD9-218ENST00000566029 MUC7Q8TAX7 377 aa2.47□□□□□ -2.01
CHD9-218ENST00000566029 SPCS1Q9Y6A9 102 aa2.47□□□□□ -2.01
CHD9-218ENST00000566029 F2RL2O00254 374 aa2.46□□□□□ -2.01
CHD9-218ENST00000566029 COX6CP09669 75 aa2.46□□□□□ -2.01
CHD9-218ENST00000566029 DUTP33316 252 aaKnown RBP2.46□□□□□ -2.01
CHD9-218ENST00000566029 PSG4Q00888 419 aa2.46□□□□□ -2.01
CHD9-218ENST00000566029 EGR4Q05215 589 aa2.46□□□□□ -2.01
CHD9-218ENST00000566029 FOXL1Q12952 345 aa2.46□□□□□ -2.01
CHD9-218ENST00000566029 CMTM8Q8IZV2 173 aa2.46□□□□□ -2.01
CHD9-218ENST00000566029 OR2M3Q8NG83 312 aa2.46□□□□□ -2.01
CHD9-218ENST00000566029 C11orf52Q96A22 123 aa2.46□□□□□ -2.01
CHD9-218ENST00000566029 COX14Q96I36 57 aa2.46□□□□□ -2.01
CHD9-218ENST00000566029 SGK494Q96LW2 274 aa2.46□□□□□ -2.01
CHD9-218ENST00000566029 RAI1Q7Z5J4 1906 aaPredicted RBP2.46□□□□□ -2.02
CHD9-218ENST00000566029 MUC21A0A0G2JKD1 596 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 UBE2L5PA0A1B0GUS4 154 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 NDUFB1O75438 58 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 FRMD6-AS1P0C7T7 363 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 CRYBA4P53673 196 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 CD69Q07108 199 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 PDE6HQ13956 83 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 OR2K2Q8NGT1 345 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 SGMS2Q8NHU3 365 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 SLC25A40Q8TBP6 338 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 BADQ92934 168 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 KLF7O75840 302 aaPredicted RBP2.46□□□□□ -2.02
CHD9-218ENST00000566029 TUSC2O75896 110 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 LINC00869P0C866 280 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 CRISP2P16562 243 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 PSG5Q15238 335 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 METRNQ9UJH8 293 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 TSSC4Q9Y5U2 329 aaPredicted RBP2.46□□□□□ -2.02
CHD9-218ENST00000566029 ICE1Q9Y2F5 2266 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 PTPRDP23468 1912 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 A0A0G2JNJ9 132 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 SSSCA1O60232 199 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 SAP30O75446 220 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 GP1BBP13224 206 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 EN2P19622 333 aaPredicted RBP2.46□□□□□ -2.02
CHD9-218ENST00000566029 SP6Q3SY56 376 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 OR5AN1Q8NGI8 311 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 C11orf40Q8WZ69 217 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 Q9UFV3 132 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 CYSLTR1Q9Y271 337 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 CACNA1CQ13936 2221 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 IGKV1-9A0A0C4DH69 117 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 NCBP2LA6PVI3 153 aaKnown RBP2.46□□□□□ -2.02
CHD9-218ENST00000566029 FCGR3BO75015 233 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 RNASE1P07998 156 aaKnown RBP2.46□□□□□ -2.02
CHD9-218ENST00000566029 GPR6P46095 362 aaPredicted RBP2.46□□□□□ -2.02
CHD9-218ENST00000566029 UBE2BP63146 152 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 MEF2BQ02080 365 aaPredicted RBP2.46□□□□□ -2.02
CHD9-218ENST00000566029 SERTAD4-AS1Q5TG53 156 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 SPATA12Q7Z6I5 190 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 WDR61Q9GZS3 305 aaKnown RBP2.46□□□□□ -2.02
CHD9-218ENST00000566029 DAPP1Q9UN19 280 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 CACNA1EQ15878 2313 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 VWA8A3KMH1 1905 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 NPIPB7O75200 414 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 EML2O95834 649 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 INAFM2P0DMQ5 153 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 CD27P26842 260 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 ZP4Q12836 540 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 ZNF542PQ5EBM4 170 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 SLC25A33Q9BSK2 321 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 MAP1LC3CQ9BXW4 147 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 TAAR3PQ9P1P4 343 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 LY96Q9Y6Y9 160 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 PHF3Q92576 2039 aaKnown RBP2.46□□□□□ -2.02
CHD9-218ENST00000566029 TRAV26-1A0A087WT03 109 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 TRAV17A0A0B4J275 112 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 RRHO14718 337 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 LRRC75A-AS1Q8N1F1 130 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 MPLKIPQ8TAP9 179 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 TRAV24A0A0B4J272 114 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 PLPP3O14495 311 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 MRPL33O75394 65 aaKnown RBP2.46□□□□□ -2.02
CHD9-218ENST00000566029 CAMPP49913 170 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 PMP22Q01453 160 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 TSPO2Q5TGU0 170 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.46□□□□□ -2.021e-6■■■■■ 28.5
CHD9-218ENST00000566029 TMEM38BQ9NVV0 291 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 IL36BQ9NZH7 164 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 OR2W1Q9Y3N9 320 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 TRAV38-1A0A0B4J264 116 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 C5orf67F2Z3F1 127 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 IGKV1D-33P01593 117 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 IGKV1-33P01594 117 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 HBZP02008 142 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 SLC25A5P05141 298 aaKnown RBP2.46□□□□□ -2.02
CHD9-218ENST00000566029 ODF1Q14990 250 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 DUX5Q96PT3 197 aa2.46□□□□□ -2.02
CHD9-218ENST00000566029 KIF26BQ2KJY2 2108 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms