RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 UXS1Q8NBZ7 420 aa9.47□□□□□ -0.89
RNF40-208ENST00000565995 KIR2DL5BQ8NHK3 375 aa9.47□□□□□ -0.89
RNF40-208ENST00000565995 CACNG8Q8WXS5 425 aa9.47□□□□□ -0.89
RNF40-208ENST00000565995 CCDC140Q96MF4 163 aa9.47□□□□□ -0.89
RNF40-208ENST00000565995 FXYD6Q9H0Q3 95 aa9.47□□□□□ -0.89
RNF40-208ENST00000565995 FAT2Q9NYQ8 4349 aa9.46□□□□□ -0.9
RNF40-208ENST00000565995 LINC00473A8K010 186 aa9.46□□□□□ -0.9
RNF40-208ENST00000565995 CRYZL1O95825 349 aa9.46□□□□□ -0.9
RNF40-208ENST00000565995 CRYGCP07315 174 aa9.46□□□□□ -0.9
RNF40-208ENST00000565995 PSMB6P28072 239 aa9.46□□□□□ -0.9
RNF40-208ENST00000565995 RBMS2Q15434 407 aaKnown RBP9.46□□□□□ -0.9
RNF40-208ENST00000565995 TMEM217Q8N7C4 229 aa9.46□□□□□ -0.9
RNF40-208ENST00000565995 SECTM1Q8WVN6 248 aa9.46□□□□□ -0.9
RNF40-208ENST00000565995 MARC2Q969Z3 335 aa9.46□□□□□ -0.9
RNF40-208ENST00000565995 FANCD2OSQ96PS1 177 aa9.46□□□□□ -0.9
RNF40-208ENST00000565995 OR2W1Q9Y3N9 320 aa9.46□□□□□ -0.9
RNF40-208ENST00000565995 DNAH17Q9UFH2 4485 aa9.46□□□□□ -0.9
RNF40-208ENST00000565995 TEX22C9J3V5 150 aa9.45□□□□□ -0.9
RNF40-208ENST00000565995 PTTG1O95997 202 aa9.45□□□□□ -0.9
RNF40-208ENST00000565995 ZNF735P0CB33 412 aa9.45□□□□□ -0.9
RNF40-208ENST00000565995 SAA1P0DJI8 122 aaPredicted RBP9.45□□□□□ -0.9
RNF40-208ENST00000565995 ARL3P36405 182 aa9.45□□□□□ -0.9
RNF40-208ENST00000565995 ELLP55199 621 aaPredicted RBP9.45□□□□□ -0.9
RNF40-208ENST00000565995 OR2C3Q8N628 320 aa9.45□□□□□ -0.9
RNF40-208ENST00000565995 TERB2Q8NHR7 220 aa9.45□□□□□ -0.9
RNF40-208ENST00000565995 PHLDA1Q8WV24 401 aaPredicted RBP9.45□□□□□ -0.9
RNF40-208ENST00000565995 GIMAP1Q8WWP7 306 aa9.45□□□□□ -0.9
RNF40-208ENST00000565995 MOB3AQ96BX8 217 aa9.45□□□□□ -0.9
RNF40-208ENST00000565995 SLC5A7Q9GZV3 580 aa9.45□□□□□ -0.9
RNF40-208ENST00000565995 MRPL27Q9P0M9 148 aaKnown RBP9.45□□□□□ -0.9
RNF40-208ENST00000565995 FBXL7Q9UJT9 491 aa9.45□□□□□ -0.9
RNF40-208ENST00000565995 ACTL6BO94805 426 aa9.44□□□□□ -0.9
RNF40-208ENST00000565995 SCAF4O95104 1147 aaKnown RBP9.44□□□□□ -0.9
RNF40-208ENST00000565995 RLN1P04808 185 aa9.44□□□□□ -0.9
RNF40-208ENST00000565995 IL6RP08887 468 aaPredicted RBP9.44□□□□□ -0.9
RNF40-208ENST00000565995 BTCP35070 178 aa9.44□□□□□ -0.9
RNF40-208ENST00000565995 TRIM16LQ309B1 348 aa9.44□□□□□ -0.9
RNF40-208ENST00000565995 DEFB135Q30KP9 77 aa9.44□□□□□ -0.9
RNF40-208ENST00000565995 DHRS11Q6UWP2 260 aa9.44□□□□□ -0.9
RNF40-208ENST00000565995 CLEC19AQ6UXS0 136 aa9.44□□□□□ -0.9
RNF40-208ENST00000565995 NRARPQ7Z6K4 114 aa9.44□□□□□ -0.9
RNF40-208ENST00000565995 TMED4Q7Z7H5 227 aa9.44□□□□□ -0.9
RNF40-208ENST00000565995 LHFPL1Q86WI0 220 aa9.44□□□□□ -0.9
RNF40-208ENST00000565995 MARCH1Q8TCQ1 289 aa9.44□□□□□ -0.9
RNF40-208ENST00000565995 FYTTD1Q96QD9 318 aaKnown RBP9.44□□□□□ -0.9
RNF40-208ENST00000565995 SPAG8Q99932 426 aaPredicted RBP9.44□□□□□ -0.9
RNF40-208ENST00000565995 C20orf85Q9H1P6 137 aa9.44□□□□□ -0.9
RNF40-208ENST00000565995 C5orf66Q9H5L9 145 aa9.44□□□□□ -0.9
RNF40-208ENST00000565995 SLC2A9Q9NRM0 540 aa9.44□□□□□ -0.9
RNF40-208ENST00000565995 COPZ2Q9P299 210 aa9.44□□□□□ -0.9
RNF40-208ENST00000565995 C14orf166Q9Y224 244 aaKnown RBP9.44□□□□□ -0.9
RNF40-208ENST00000565995 PKD1P98161 4303 aa9.43□□□□□ -0.9
RNF40-208ENST00000565995 DNAH2Q9P225 4427 aa9.43□□□□□ -0.9
RNF40-208ENST00000565995 TRAV6A0A075B6T7 132 aa9.43□□□□□ -0.9
RNF40-208ENST00000565995 TRBV7-1A0A0A6YYK4 115 aa9.43□□□□□ -0.9
RNF40-208ENST00000565995 IGKV1D-13A0A0B4J2D9 117 aa9.43□□□□□ -0.9
RNF40-208ENST00000565995 ZNF320A2RRD8 509 aa9.43□□□□□ -0.9
RNF40-208ENST00000565995 HMX3A6NHT5 357 aa9.43□□□□□ -0.9
RNF40-208ENST00000565995 E7EUB6 86 aa9.43□□□□□ -0.9
RNF40-208ENST00000565995 NDUFB6O95139 128 aa9.43□□□□□ -0.9
RNF40-208ENST00000565995 IGKV1-13P0DP09 117 aa9.43□□□□□ -0.9
RNF40-208ENST00000565995 HIST1H1BP16401 226 aaKnown RBP9.43□□□□□ -0.9
RNF40-208ENST00000565995 S100GP29377 79 aa9.43□□□□□ -0.9
RNF40-208ENST00000565995 MAS1LP35410 378 aa9.43□□□□□ -0.9
RNF40-208ENST00000565995 TCTAP57738 103 aa9.43□□□□□ -0.9
RNF40-208ENST00000565995 C10orf55Q5SWW7 151 aa9.43□□□□□ -0.9
RNF40-208ENST00000565995 AADACL3Q5VUY0 350 aa9.43□□□□□ -0.9
RNF40-208ENST00000565995 LPCAT3Q6P1A2 487 aa9.43□□□□□ -0.9
RNF40-208ENST00000565995 PLET1Q6UQ28 207 aa9.43□□□□□ -0.9
RNF40-208ENST00000565995 BTNL8Q6UX41 500 aa9.43□□□□□ -0.9
RNF40-208ENST00000565995 RBPMS2Q6ZRY4 209 aaKnown RBP9.43□□□□□ -0.9
RNF40-208ENST00000565995 SLC38A6Q8IZM9 456 aa9.43□□□□□ -0.9
RNF40-208ENST00000565995 OR1L6Q8NGR2 347 aa9.43□□□□□ -0.9
RNF40-208ENST00000565995 OR13C8Q8NGS7 320 aa9.43□□□□□ -0.9
RNF40-208ENST00000565995 EEF1AKMT3Q96AZ1 226 aa9.43□□□□□ -0.9
RNF40-208ENST00000565995 SCGB3A2Q96PL1 93 aa9.43□□□□□ -0.9
RNF40-208ENST00000565995 SLC25A21Q9BQT8 299 aaPredicted RBP9.43□□□□□ -0.9
RNF40-208ENST00000565995 CCL28Q9NRJ3 127 aa9.43□□□□□ -0.9
RNF40-208ENST00000565995 NUDT15Q9NV35 164 aa9.43□□□□□ -0.9
RNF40-208ENST00000565995 SELENOKQ9Y6D0 94 aa9.43□□□□□ -0.9
RNF40-208ENST00000565995 A0A1B0GW64 132 aa9.42□□□□□ -0.9
RNF40-208ENST00000565995 TSPAN4O14817 238 aa9.42□□□□□ -0.9
RNF40-208ENST00000565995 TCRBP04435 133 aa9.42□□□□□ -0.9
RNF40-208ENST00000565995 CTRB1P17538 263 aa9.42□□□□□ -0.9
RNF40-208ENST00000565995 PI3P19957 117 aa9.42□□□□□ -0.9
RNF40-208ENST00000565995 PRR20EP86478 221 aa9.42□□□□□ -0.9
RNF40-208ENST00000565995 PRR20CP86479 221 aa9.42□□□□□ -0.9
RNF40-208ENST00000565995 PRR20DP86480 221 aa9.42□□□□□ -0.9
RNF40-208ENST00000565995 PRR20BP86481 221 aa9.42□□□□□ -0.9
RNF40-208ENST00000565995 PRR20AP86496 221 aa9.42□□□□□ -0.9
RNF40-208ENST00000565995 SURF2Q15527 256 aaPredicted RBP9.42□□□□□ -0.9
RNF40-208ENST00000565995 PHLDA2Q53GA4 152 aa9.42□□□□□ -0.9
RNF40-208ENST00000565995 CTRB2Q6GPI1 263 aa9.42□□□□□ -0.9
RNF40-208ENST00000565995 UNQ9165/PRO28630Q6UXU0 137 aa9.42□□□□□ -0.9
RNF40-208ENST00000565995 CMTM1Q8IZ96 169 aa9.42□□□□□ -0.9
RNF40-208ENST00000565995 PUSL1Q8N0Z8 303 aaKnown RBP9.42□□□□□ -0.9
RNF40-208ENST00000565995 CENPSQ8N2Z9 138 aa9.42□□□□□ -0.9
RNF40-208ENST00000565995 ZNF645Q8N7E2 425 aa9.42□□□□□ -0.9
RNF40-208ENST00000565995 STPG3Q8N7X2 389 aa9.42□□□□□ -0.9
RNF40-208ENST00000565995 TMEM167AQ8TBQ9 72 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms