RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 ELK1P19419 428 aa17.65■□□□□ 0.42
RAB40C-209ENST00000565511 ODF3L2Q3SX64 289 aa17.65■□□□□ 0.42
RAB40C-209ENST00000565511 RBPMS2Q6ZRY4 209 aaKnown RBP17.65■□□□□ 0.42
RAB40C-209ENST00000565511 SEC22AQ96IW7 307 aa17.65■□□□□ 0.42
RAB40C-209ENST00000565511 C5orf66Q9H5L9 145 aa17.65■□□□□ 0.42
RAB40C-209ENST00000565511 PRNDQ9UKY0 176 aa17.65■□□□□ 0.42
RAB40C-209ENST00000565511 M0QYG6 137 aa17.64■□□□□ 0.41
RAB40C-209ENST00000565511 SNAPC5O75971 98 aa17.64■□□□□ 0.41
RAB40C-209ENST00000565511 APOA1P02647 267 aa17.64■□□□□ 0.41
RAB40C-209ENST00000565511 EWSR1Q01844 656 aaKnown RBP eCLIP17.64■□□□□ 0.418e-7■■■■□ 23.2
RAB40C-209ENST00000565511 RNASE12Q5GAN4 147 aaKnown RBP17.64■□□□□ 0.41
RAB40C-209ENST00000565511 OR2C3Q8N628 320 aa17.64■□□□□ 0.41
RAB40C-209ENST00000565511 UBAC2Q8NBM4 344 aa17.64■□□□□ 0.41
RAB40C-209ENST00000565511 NAA50Q9GZZ1 169 aaKnown RBP17.64■□□□□ 0.41
RAB40C-209ENST00000565511 VCX3AQ9NNX9 186 aa17.64■□□□□ 0.41
RAB40C-209ENST00000565511 DAZ1Q9NQZ3 744 aaKnown RBP17.64■□□□□ 0.41
RAB40C-209ENST00000565511 NDUFA4O00483 81 aa17.63■□□□□ 0.41
RAB40C-209ENST00000565511 TSPAN4O14817 238 aa17.63■□□□□ 0.41
RAB40C-209ENST00000565511 IZUMO4Q1ZYL8 232 aa17.63■□□□□ 0.41
RAB40C-209ENST00000565511 ANKRD55Q3KP44 614 aa17.63■□□□□ 0.41
RAB40C-209ENST00000565511 C20orf24Q9BUV8 137 aa17.63■□□□□ 0.41
RAB40C-209ENST00000565511 IGHV3-48P01763 117 aa17.62■□□□□ 0.41
RAB40C-209ENST00000565511 CTSGP08311 255 aa17.62■□□□□ 0.41
RAB40C-209ENST00000565511 RCVRNP35243 200 aa17.62■□□□□ 0.41
RAB40C-209ENST00000565511 Q56UQ5 140 aa17.62■□□□□ 0.41
RAB40C-209ENST00000565511 SPSB3Q6PJ21 355 aa17.62■□□□□ 0.41
RAB40C-209ENST00000565511 OR5B3Q8NH48 314 aa17.62■□□□□ 0.41
RAB40C-209ENST00000565511 MRGPRFQ96AM1 343 aa17.62■□□□□ 0.41
RAB40C-209ENST00000565511 SPAG8Q99932 426 aaPredicted RBP17.62■□□□□ 0.41
RAB40C-209ENST00000565511 SCPEP1Q9HB40 452 aa17.62■□□□□ 0.41
RAB40C-209ENST00000565511 I3L2K1 104 aa17.61■□□□□ 0.41
RAB40C-209ENST00000565511 CYB5BO43169 146 aa17.61■□□□□ 0.41
RAB40C-209ENST00000565511 TSPAN5P62079 268 aa17.61■□□□□ 0.41
RAB40C-209ENST00000565511 SPINK9Q5DT21 86 aa17.6■□□□□ 0.41
RAB40C-209ENST00000565511 OR1P1Q8NH06 330 aa17.6■□□□□ 0.41
RAB40C-209ENST00000565511 MISP3Q96FF7 219 aa17.6■□□□□ 0.41
RAB40C-209ENST00000565511 TMEM56Q96MV1 263 aa17.6■□□□□ 0.41
RAB40C-209ENST00000565511 ATP6V0BQ99437 205 aa17.6■□□□□ 0.41
RAB40C-209ENST00000565511 FAM212BQ9NTI7 297 aaPredicted RBP17.6■□□□□ 0.41
RAB40C-209ENST00000565511 IGHV3-49A0A0A0MS15 119 aa17.59■□□□□ 0.41
RAB40C-209ENST00000565511 CTSDP07339 412 aaPredicted RBP17.59■□□□□ 0.41
RAB40C-209ENST00000565511 PI3P19957 117 aa17.59■□□□□ 0.41
RAB40C-209ENST00000565511 UCP3P55916 312 aa17.59■□□□□ 0.41
RAB40C-209ENST00000565511 SLC38A6Q8IZM9 456 aa17.59■□□□□ 0.41
RAB40C-209ENST00000565511 IL17DQ8TAD2 202 aa17.59■□□□□ 0.41
RAB40C-209ENST00000565511 CMTM3Q96MX0 182 aa17.59■□□□□ 0.41
RAB40C-209ENST00000565511 K7EMT4 169 aa17.58■□□□□ 0.4
RAB40C-209ENST00000565511 IGKV1-5P01602 117 aa17.58■□□□□ 0.4
RAB40C-209ENST00000565511 SMIM18P0DKX4 95 aa17.58■□□□□ 0.4
RAB40C-209ENST00000565511 PRCDQ00LT1 54 aa17.58■□□□□ 0.4
RAB40C-209ENST00000565511 ZNF124Q15973 351 aa17.58■□□□□ 0.4
RAB40C-209ENST00000565511 DEFB135Q30KP9 77 aa17.58■□□□□ 0.4
RAB40C-209ENST00000565511 H2BFWTQ7Z2G1 175 aa17.58■□□□□ 0.4
RAB40C-209ENST00000565511 RNF2Q99496 336 aa17.58■□□□□ 0.4
RAB40C-209ENST00000565511 TSC22D3Q99576 134 aa17.58■□□□□ 0.4
RAB40C-209ENST00000565511 FKBP11Q9NYL4 201 aa17.58■□□□□ 0.4
RAB40C-209ENST00000565511 KLK11Q9UBX7 282 aa17.58■□□□□ 0.4
RAB40C-209ENST00000565511 A0A0J9YWU9 116 aa17.57■□□□□ 0.4
RAB40C-209ENST00000565511 JTBO76095 146 aa17.57■□□□□ 0.4
RAB40C-209ENST00000565511 MT-CO2P00403 227 aa17.57■□□□□ 0.4
RAB40C-209ENST00000565511 LPCAT3Q6P1A2 487 aa17.57■□□□□ 0.4
RAB40C-209ENST00000565511 ZNF114Q8NC26 417 aa17.57■□□□□ 0.4
RAB40C-209ENST00000565511 OR4A16Q8NH70 328 aa17.57■□□□□ 0.4
RAB40C-209ENST00000565511 SMPXQ9UHP9 88 aa17.57■□□□□ 0.4
RAB40C-209ENST00000565511 SMIM31A0A1B0GVY4 71 aa17.56■□□□□ 0.4
RAB40C-209ENST00000565511 P0C879 139 aa17.56■□□□□ 0.4
RAB40C-209ENST00000565511 RPL35AP18077 110 aaKnown RBP17.56■□□□□ 0.4
RAB40C-209ENST00000565511 CTF1Q16619 201 aa17.56■□□□□ 0.4
RAB40C-209ENST00000565511 LHFPL1Q86WI0 220 aa17.56■□□□□ 0.4
RAB40C-209ENST00000565511 OR52I2Q8NH67 350 aa17.56■□□□□ 0.4
RAB40C-209ENST00000565511 TP53RKQ96S44 253 aa17.56■□□□□ 0.4
RAB40C-209ENST00000565511 IGHV3OR16-13A0A075B7E8 117 aa17.55■□□□□ 0.4
RAB40C-209ENST00000565511 IGHV3-74A0A0B4J1X5 117 aa17.55■□□□□ 0.4
RAB40C-209ENST00000565511 IGHV7-4-1A0A0J9YVY3 117 aa17.55■□□□□ 0.4
RAB40C-209ENST00000565511 C15orf62A8K5M9 175 aa17.55■□□□□ 0.4
RAB40C-209ENST00000565511 CHEK1O14757 476 aa17.55■□□□□ 0.4
RAB40C-209ENST00000565511 FCGR2BP31994 310 aaPredicted RBP17.55■□□□□ 0.4
RAB40C-209ENST00000565511 PMS2P11Q13670 270 aa17.55■□□□□ 0.4
RAB40C-209ENST00000565511 APRG1Q8IVJ8 170 aa17.55■□□□□ 0.4
RAB40C-209ENST00000565511 OR4D10Q8NGI6 311 aa17.55■□□□□ 0.4
RAB40C-209ENST00000565511 RHPN1-AS1Q9BWJ2 59 aa17.55■□□□□ 0.4
RAB40C-209ENST00000565511 FAM25AB3EWG3 89 aa17.54■□□□□ 0.4
RAB40C-209ENST00000565511 FAM25CB3EWG5 89 aa17.54■□□□□ 0.4
RAB40C-209ENST00000565511 FAM25GB3EWG6 89 aa17.54■□□□□ 0.4
RAB40C-209ENST00000565511 CD3DP04234 171 aa17.54■□□□□ 0.4
RAB40C-209ENST00000565511 MFAP4P55083 255 aa17.54■□□□□ 0.4
RAB40C-209ENST00000565511 RND3P61587 244 aa17.54■□□□□ 0.4
RAB40C-209ENST00000565511 HSPE1P61604 102 aaKnown RBP17.54■□□□□ 0.4
RAB40C-209ENST00000565511 LAMTOR1Q6IAA8 161 aa17.54■□□□□ 0.4
RAB40C-209ENST00000565511 WFDC3Q8IUB2 231 aa17.54■□□□□ 0.4
RAB40C-209ENST00000565511 PINX1Q96BK5 328 aaKnown RBP17.54■□□□□ 0.4
RAB40C-209ENST00000565511 OR10C1Q96KK4 312 aa17.54■□□□□ 0.4
RAB40C-209ENST00000565511 NXF2Q9GZY0 626 aaKnown RBP17.54■□□□□ 0.4
RAB40C-209ENST00000565511 A0A0B4J293 547 aa17.53■□□□□ 0.4
RAB40C-209ENST00000565511 OR4C46A6NHA9 309 aa17.53■□□□□ 0.4
RAB40C-209ENST00000565511 SPRY2O43597 315 aa17.53■□□□□ 0.4
RAB40C-209ENST00000565511 GABARAPO95166 117 aa17.53■□□□□ 0.4
RAB40C-209ENST00000565511 PGAM2P15259 253 aa17.53■□□□□ 0.4
RAB40C-209ENST00000565511 S100GP29377 79 aa17.53■□□□□ 0.4
RAB40C-209ENST00000565511 RORCP51449 518 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 157.4 ms