RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 WASHC3Q9Y3C0 194 aa10.19□□□□□ -0.78
NSMCE1-208ENST00000565070 FLNAP21333 2647 aaKnown RBP10.19□□□□□ -0.78
NSMCE1-208ENST00000565070 MAP1AP78559 2803 aaPredicted RBP10.18□□□□□ -0.78
NSMCE1-208ENST00000565070 TEX50A0A1B0GTY4 177 aa10.18□□□□□ -0.78
NSMCE1-208ENST00000565070 C17orf112F2Z3M2 114 aa10.18□□□□□ -0.78
NSMCE1-208ENST00000565070 IGKV1D-33P01593 117 aa10.18□□□□□ -0.78
NSMCE1-208ENST00000565070 IGKV1-33P01594 117 aa10.18□□□□□ -0.78
NSMCE1-208ENST00000565070 MYOD1P15172 320 aa10.18□□□□□ -0.78
NSMCE1-208ENST00000565070 HOXB4P17483 251 aaPredicted RBP10.18□□□□□ -0.78
NSMCE1-208ENST00000565070 NPY1RP25929 384 aa10.18□□□□□ -0.78
NSMCE1-208ENST00000565070 UBE2E1P51965 193 aa10.18□□□□□ -0.78
NSMCE1-208ENST00000565070 ELLP55199 621 aaPredicted RBP10.18□□□□□ -0.78
NSMCE1-208ENST00000565070 ATP5IP56385 69 aaPredicted RBP10.18□□□□□ -0.78
NSMCE1-208ENST00000565070 HLA-DRB5Q30154 266 aa10.18□□□□□ -0.78
NSMCE1-208ENST00000565070 ZNF506Q5JVG8 444 aa10.18□□□□□ -0.78
NSMCE1-208ENST00000565070 RPP25LQ8N5L8 163 aaKnown RBP10.18□□□□□ -0.78
NSMCE1-208ENST00000565070 TMUB1Q9BVT8 246 aa10.18□□□□□ -0.78
NSMCE1-208ENST00000565070 AMMECR1Q9Y4X0 333 aaPredicted RBP10.18□□□□□ -0.78
NSMCE1-208ENST00000565070 CSMD1Q96PZ7 3565 aa10.18□□□□□ -0.78
NSMCE1-208ENST00000565070 TNCP24821 2201 aa10.17□□□□□ -0.78
NSMCE1-208ENST00000565070 FAM74A7A6NL05 159 aa10.17□□□□□ -0.78
NSMCE1-208ENST00000565070 SOX15O60248 233 aa10.17□□□□□ -0.78
NSMCE1-208ENST00000565070 COX7A1P24310 79 aa10.17□□□□□ -0.78
NSMCE1-208ENST00000565070 NPBWR1P48145 328 aa10.17□□□□□ -0.78
NSMCE1-208ENST00000565070 BPIFB3P59826 476 aa10.17□□□□□ -0.78
NSMCE1-208ENST00000565070 PMS2P11Q13670 270 aa10.17□□□□□ -0.78
NSMCE1-208ENST00000565070 ICAM4Q14773 271 aa10.17□□□□□ -0.78
NSMCE1-208ENST00000565070 FAM74A3Q4VXF1 159 aa10.17□□□□□ -0.78
NSMCE1-208ENST00000565070 PNKDQ8N490 385 aa10.17□□□□□ -0.78
NSMCE1-208ENST00000565070 ZNF709Q8N972 641 aa10.17□□□□□ -0.78
NSMCE1-208ENST00000565070 VSTM2AQ8TAG5 236 aa10.17□□□□□ -0.78
NSMCE1-208ENST00000565070 TMEM167AQ8TBQ9 72 aa10.17□□□□□ -0.78
NSMCE1-208ENST00000565070 PLEKHA3Q9HB20 300 aa10.17□□□□□ -0.78
NSMCE1-208ENST00000565070 INS-IGF2F8WCM5 200 aa10.17□□□□□ -0.78
NSMCE1-208ENST00000565070 CA2P00918 260 aa10.17□□□□□ -0.78
NSMCE1-208ENST00000565070 IGLV2-23P01705 113 aa10.17□□□□□ -0.78
NSMCE1-208ENST00000565070 HSPB1P04792 205 aaKnown RBP10.17□□□□□ -0.78
NSMCE1-208ENST00000565070 IFNA4P05014 189 aa10.17□□□□□ -0.78
NSMCE1-208ENST00000565070 PRB3Q04118 309 aaPredicted RBP10.17□□□□□ -0.78
NSMCE1-208ENST00000565070 BSXQ3C1V8 233 aa10.17□□□□□ -0.78
NSMCE1-208ENST00000565070 SMUG1Q53HV7 270 aa10.17□□□□□ -0.78
NSMCE1-208ENST00000565070 TREML4Q6UXN2 200 aa10.17□□□□□ -0.78
NSMCE1-208ENST00000565070 CLRN3Q8NCR9 226 aa10.17□□□□□ -0.78
NSMCE1-208ENST00000565070 MAP1LC3B2A6NCE7 125 aa10.16□□□□□ -0.78
NSMCE1-208ENST00000565070 FNDC10F2Z333 226 aa10.16□□□□□ -0.78
NSMCE1-208ENST00000565070 BUB1B-PAK6H3BSN5 160 aa10.16□□□□□ -0.78
NSMCE1-208ENST00000565070 CEACAM3P40198 252 aa10.16□□□□□ -0.78
NSMCE1-208ENST00000565070 LGALS4P56470 323 aa10.16□□□□□ -0.78
NSMCE1-208ENST00000565070 RPL8P62917 257 aaKnown RBP10.16□□□□□ -0.78
NSMCE1-208ENST00000565070 KRTAP1-1Q07627 177 aa10.16□□□□□ -0.78
NSMCE1-208ENST00000565070 HAGHQ16775 308 aa10.16□□□□□ -0.78
NSMCE1-208ENST00000565070 KHDC3LQ587J8 217 aa10.16□□□□□ -0.78
NSMCE1-208ENST00000565070 FFAR4Q5NUL3 377 aa10.16□□□□□ -0.78
NSMCE1-208ENST00000565070 LCN15Q6UWW0 184 aa10.16□□□□□ -0.78
NSMCE1-208ENST00000565070 NANPQ8TBE9 248 aa10.16□□□□□ -0.78
NSMCE1-208ENST00000565070 MAP1LC3BQ9GZQ8 125 aa10.16□□□□□ -0.78
NSMCE1-208ENST00000565070 NDUFA4L2Q9NRX3 87 aa10.16□□□□□ -0.78
NSMCE1-208ENST00000565070 LSM4Q9Y4Z0 139 aaKnown RBP10.16□□□□□ -0.78
NSMCE1-208ENST00000565070 TRAV40A0A0B4J280 105 aa10.15□□□□□ -0.78
NSMCE1-208ENST00000565070 IGHV1-69DA0A0B4J2H0 117 aa10.15□□□□□ -0.78
NSMCE1-208ENST00000565070 CTXND1A0A1B0GTU2 59 aa10.15□□□□□ -0.78
NSMCE1-208ENST00000565070 LOC102723971A0A1B0GUV8 181 aa10.15□□□□□ -0.78
NSMCE1-208ENST00000565070 ODF3BA8MYP8 253 aa10.15□□□□□ -0.78
NSMCE1-208ENST00000565070 NUPL2O15504 423 aaKnown RBP10.15□□□□□ -0.78
NSMCE1-208ENST00000565070 IGHV1-69P01742 117 aa10.15□□□□□ -0.78
NSMCE1-208ENST00000565070 SRP19P09132 144 aaKnown RBP10.15□□□□□ -0.78
NSMCE1-208ENST00000565070 HNF1AP20823 631 aa10.15□□□□□ -0.78
NSMCE1-208ENST00000565070 HTR1DP28221 377 aa10.15□□□□□ -0.78
NSMCE1-208ENST00000565070 LGALS7P47929 136 aa10.15□□□□□ -0.78
NSMCE1-208ENST00000565070 KLRD1Q13241 179 aa10.15□□□□□ -0.78
NSMCE1-208ENST00000565070 HNF4GQ14541 408 aa10.15□□□□□ -0.78
NSMCE1-208ENST00000565070 MINOS1Q5TGZ0 78 aa10.15□□□□□ -0.78
NSMCE1-208ENST00000565070 HCP5Q6MZN7 132 aa10.15□□□□□ -0.78
NSMCE1-208ENST00000565070 OR4P4Q8NGL7 312 aa10.15□□□□□ -0.78
NSMCE1-208ENST00000565070 OR10G4Q8NGN3 311 aa10.15□□□□□ -0.78
NSMCE1-208ENST00000565070 OR10G9Q8NGN4 311 aa10.15□□□□□ -0.78
NSMCE1-208ENST00000565070 OR10G7Q8NGN6 311 aa10.15□□□□□ -0.78
NSMCE1-208ENST00000565070 HINT2Q9BX68 163 aa10.15□□□□□ -0.78
NSMCE1-208ENST00000565070 COMMD5Q9GZQ3 224 aa10.15□□□□□ -0.78
NSMCE1-208ENST00000565070 YAE1D1Q9NRH1 226 aa10.15□□□□□ -0.78
NSMCE1-208ENST00000565070 TMEM160Q9NX00 188 aa10.15□□□□□ -0.78
NSMCE1-208ENST00000565070 TBL2Q9Y4P3 447 aaKnown RBP10.15□□□□□ -0.78
NSMCE1-208ENST00000565070 MINOS1-NBL1R4GNA1 71 aa10.15□□□□□ -0.78
NSMCE1-208ENST00000565070 SETXQ7Z333 2677 aaKnown RBP10.15□□□□□ -0.78
NSMCE1-208ENST00000565070 CENPVL3A0A0U1RRI6 287 aa10.15□□□□□ -0.79
NSMCE1-208ENST00000565070 LY6LH3BQJ8 138 aa10.15□□□□□ -0.79
NSMCE1-208ENST00000565070 OPN1MWP04001 364 aa10.15□□□□□ -0.79
NSMCE1-208ENST00000565070 OPN1MW2P0DN77 364 aa10.15□□□□□ -0.79
NSMCE1-208ENST00000565070 OPN1MW3P0DN78 364 aa10.15□□□□□ -0.79
NSMCE1-208ENST00000565070 OPRK1P41145 380 aa10.15□□□□□ -0.79
NSMCE1-208ENST00000565070 C2orf83Q53S99 150 aa10.15□□□□□ -0.79
NSMCE1-208ENST00000565070 ARSJQ5FYB0 599 aaPredicted RBP10.15□□□□□ -0.79
NSMCE1-208ENST00000565070 OR1L8Q8NGR8 309 aa10.15□□□□□ -0.79
NSMCE1-208ENST00000565070 NPVFQ9HCQ7 196 aa10.15□□□□□ -0.79
NSMCE1-208ENST00000565070 SLC39A9Q9NUM3 307 aa10.15□□□□□ -0.79
NSMCE1-208ENST00000565070 GNG13Q9P2W3 67 aa10.15□□□□□ -0.79
NSMCE1-208ENST00000565070 SMCO3A2RU48 225 aa10.14□□□□□ -0.79
NSMCE1-208ENST00000565070 TSPAN4O14817 238 aa10.14□□□□□ -0.79
NSMCE1-208ENST00000565070 NPFFO15130 113 aa10.14□□□□□ -0.79
NSMCE1-208ENST00000565070 OR13C7P0DN81 318 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms