RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 NIT1Q86X76 327 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 PLCZ1Q86YW0 608 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 UMODL1-AS1Q8N2C9 162 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 NATD1Q8N6N6 113 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 LFNGQ8NES3 379 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 CYGBQ8WWM9 190 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 TAMM41Q96BW9 452 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 HBEGFQ99075 208 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 UGT2B28Q9BY64 529 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 FAM206AQ9NX38 181 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 EURLQ9NYK6 297 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 TMEM216Q9P0N5 145 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 HS3ST2Q9Y278 367 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 ICE1Q9Y2F5 2266 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 ABCA12Q86UK0 2595 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 LRRK2Q5S007 2527 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 FANCMQ8IYD8 2048 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 CELSR2Q9HCU4 2923 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 YLPM1P49750 1951 aaKnown RBP1.25□□□□□ -2.21
PALB2-203ENST00000565038 EML5Q05BV3 1969 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 ANAPC1Q9H1A4 1944 aa1.25□□□□□ -2.21
PALB2-203ENST00000565038 ANK1P16157 1881 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 PLECQ15149 4684 aaKnown RBP1.24□□□□□ -2.21
PALB2-203ENST00000565038 SPAG17Q6Q759 2223 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 RP1L1Q8IWN7 2480 aaPredicted RBP1.24□□□□□ -2.21
PALB2-203ENST00000565038 A0A087X0T9 212 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 KCNK1O00180 336 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 ZNF189O75820 626 aaPredicted RBP1.24□□□□□ -2.21
PALB2-203ENST00000565038 HBZP02008 142 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 CRYGDP07320 174 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 FAM228BP0C875 321 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 OR13C7P0DN81 318 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 CFL1P23528 166 aaKnown RBP1.24□□□□□ -2.21
PALB2-203ENST00000565038 KDELR1P24390 212 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 PSMB6P28072 239 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 AGTR1P30556 359 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 SDC4P31431 198 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 PSMB3P49720 205 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 HLA-DRB5Q30154 266 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 BRMS1LQ5PSV4 323 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 TIMM23BQ5SRD1 257 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 CCDC122Q5T0U0 273 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.24□□□□□ -2.21
PALB2-203ENST00000565038 SPATA31B1PQ5VZV4 182 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 DCUN1D2Q6PH85 259 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 SCGB1D4Q6XE38 83 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 PLEKHG7Q6ZR37 379 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 CCDC121Q6ZUS5 278 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 ATP5L2Q7Z4Y8 100 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 PHF13Q86YI8 300 aaPredicted RBP1.24□□□□□ -2.21
PALB2-203ENST00000565038 FAM9CQ8IZT9 166 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 RIBC1Q8N443 379 aaPredicted RBP1.24□□□□□ -2.21
PALB2-203ENST00000565038 YIPF7Q8N8F6 280 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 TMEM75Q8N9X5 138 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 CCDC112Q8NEF3 446 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 OR10P1Q8NGE3 313 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 OR5K1Q8NHB7 308 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 SUN5Q8TC36 379 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 MCEEQ96PE7 176 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 ZNF426Q9BUY5 554 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 SNRNP25Q9BV90 132 aaKnown RBP1.24□□□□□ -2.21
PALB2-203ENST00000565038 GTSF1LQ9H1H1 148 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 PSMD13Q9UNM6 376 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 PUS1Q9Y606 427 aaKnown RBP eCLIP1.24□□□□□ -2.21
PALB2-203ENST00000565038 PCDH15Q96QU1 1955 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 PTPRDP23468 1912 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 LRBAP50851 2863 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 RP1P56715 2156 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 CSMD2Q7Z408 3487 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 CREBBPQ92793 2442 aa1.24□□□□□ -2.21
PALB2-203ENST00000565038 SVEP1Q4LDE5 3571 aa1.23□□□□□ -2.21
PALB2-203ENST00000565038 TACC2O95359 2948 aa1.23□□□□□ -2.21
PALB2-203ENST00000565038 MYO9AB2RTY4 2548 aa1.23□□□□□ -2.21
PALB2-203ENST00000565038 GREB1Q4ZG55 1949 aa1.23□□□□□ -2.21
PALB2-203ENST00000565038 LOC285095A0A1B0GVY8 99 aa1.23□□□□□ -2.21
PALB2-203ENST00000565038 IGSF23A1L1A6 192 aa1.23□□□□□ -2.21
PALB2-203ENST00000565038 TMEM213A2RRL7 107 aa1.23□□□□□ -2.21
PALB2-203ENST00000565038 LINC00862A6NCI5 91 aa1.23□□□□□ -2.21
PALB2-203ENST00000565038 OR51F1A6NGY5 319 aa1.23□□□□□ -2.21
PALB2-203ENST00000565038 KNCNA6PVL3 124 aa1.23□□□□□ -2.21
PALB2-203ENST00000565038 CCRL2O00421 344 aa1.23□□□□□ -2.21
PALB2-203ENST00000565038 AZIN1O14977 448 aa1.23□□□□□ -2.21
PALB2-203ENST00000565038 SYNGR1O43759 233 aa1.23□□□□□ -2.21
PALB2-203ENST00000565038 PROSCO94903 275 aa1.23□□□□□ -2.21
PALB2-203ENST00000565038 STATHP02808 62 aa1.23□□□□□ -2.21
PALB2-203ENST00000565038 HLA-DQB2P05538 268 aa1.23□□□□□ -2.21
PALB2-203ENST00000565038 CALB1P05937 261 aa1.23□□□□□ -2.21
PALB2-203ENST00000565038 KRT7P08729 469 aa1.23□□□□□ -2.21
PALB2-203ENST00000565038 UGT2B7P16662 529 aa1.23□□□□□ -2.21
PALB2-203ENST00000565038 ZNF7P17097 686 aaPredicted RBP1.23□□□□□ -2.21
PALB2-203ENST00000565038 MARCKSL1P49006 195 aa1.23□□□□□ -2.21
PALB2-203ENST00000565038 SPINT3P49223 89 aa1.23□□□□□ -2.21
PALB2-203ENST00000565038 BLVRAP53004 296 aa1.23□□□□□ -2.21
PALB2-203ENST00000565038 TPI1P60174 286 aa1.23□□□□□ -2.21
PALB2-203ENST00000565038 DYNLT1P63172 113 aa1.23□□□□□ -2.21
PALB2-203ENST00000565038 UBE2IP63279 158 aaKnown RBP1.23□□□□□ -2.21
PALB2-203ENST00000565038 SLC35A2P78381 396 aa1.23□□□□□ -2.21
PALB2-203ENST00000565038 PRDX4Q13162 271 aa1.23□□□□□ -2.21
PALB2-203ENST00000565038 C4orf26Q17RF5 130 aa1.23□□□□□ -2.21
PALB2-203ENST00000565038 CCSMST1Q4G0I0 132 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms