RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 TDGF1P13385 188 aa16.9■□□□□ 0.3
MAP1LC3B-206ENST00000564844 CTRLP40313 264 aa16.9■□□□□ 0.3
MAP1LC3B-206ENST00000564844 ZNRF1Q8ND25 227 aa16.9■□□□□ 0.3
MAP1LC3B-206ENST00000564844 TSKUQ8WUA8 353 aa16.9■□□□□ 0.3
MAP1LC3B-206ENST00000564844 KCNS1Q96KK3 526 aa16.9■□□□□ 0.3
MAP1LC3B-206ENST00000564844 CDC42EP3Q9UKI2 254 aa16.9■□□□□ 0.3
MAP1LC3B-206ENST00000564844 SLC45A2Q9UMX9 530 aa16.9■□□□□ 0.3
MAP1LC3B-206ENST00000564844 CA2P00918 260 aa16.9■□□□□ 0.3
MAP1LC3B-206ENST00000564844 Q0VG73 95 aa16.9■□□□□ 0.3
MAP1LC3B-206ENST00000564844 GP6Q9HCN6 339 aa16.9■□□□□ 0.3
MAP1LC3B-206ENST00000564844 SLC35D1Q9NTN3 355 aa16.9■□□□□ 0.3
MAP1LC3B-206ENST00000564844 PILRBQ9UKJ0 227 aa16.9■□□□□ 0.3
MAP1LC3B-206ENST00000564844 TRAV5A0A0B4J249 113 aa16.89■□□□□ 0.29
MAP1LC3B-206ENST00000564844 USF1P22415 310 aaPredicted RBP16.89■□□□□ 0.29
MAP1LC3B-206ENST00000564844 TIGITQ495A1 244 aa16.89■□□□□ 0.29
MAP1LC3B-206ENST00000564844 FAM201AQ5SY85 155 aa16.89■□□□□ 0.29
MAP1LC3B-206ENST00000564844 SFXN3Q9BWM7 321 aa16.89■□□□□ 0.29
MAP1LC3B-206ENST00000564844 SPINT2O43291 252 aa16.89■□□□□ 0.29
MAP1LC3B-206ENST00000564844 S100A7P31151 101 aa16.89■□□□□ 0.29
MAP1LC3B-206ENST00000564844 RPL8P62917 257 aaKnown RBP16.89■□□□□ 0.29
MAP1LC3B-206ENST00000564844 TNXAQ16473 311 aa16.89■□□□□ 0.29
MAP1LC3B-206ENST00000564844 SLC35E4Q6ICL7 350 aa16.89■□□□□ 0.29
MAP1LC3B-206ENST00000564844 RNASEKQ6P5S7 137 aaKnown RBP16.89■□□□□ 0.29
MAP1LC3B-206ENST00000564844 KIR3DL3Q8N743 410 aa16.89■□□□□ 0.29
MAP1LC3B-206ENST00000564844 ZNF355PQ9NSJ1 428 aa16.89■□□□□ 0.29
MAP1LC3B-206ENST00000564844 TIMM8AO60220 97 aaPredicted RBP16.88■□□□□ 0.29
MAP1LC3B-206ENST00000564844 VDAC2P45880 294 aaPredicted RBP16.88■□□□□ 0.29
MAP1LC3B-206ENST00000564844 SAPCD1Q5SSQ6 148 aa16.88■□□□□ 0.29
MAP1LC3B-206ENST00000564844 IBA57Q5T440 356 aaKnown RBP16.88■□□□□ 0.29
MAP1LC3B-206ENST00000564844 C11orf53Q8IXP5 236 aa16.88■□□□□ 0.29
MAP1LC3B-206ENST00000564844 CLEC5AQ9NY25 188 aa16.88■□□□□ 0.29
MAP1LC3B-206ENST00000564844 ZNRD1Q9P1U0 126 aa16.88■□□□□ 0.29
MAP1LC3B-206ENST00000564844 DUSP13Q9UII6 198 aa16.88■□□□□ 0.29
MAP1LC3B-206ENST00000564844 WISP2O76076 250 aa16.88■□□□□ 0.29
MAP1LC3B-206ENST00000564844 ZNF766Q5HY98 468 aa16.88■□□□□ 0.29
MAP1LC3B-206ENST00000564844 ACP7Q6ZNF0 438 aa16.88■□□□□ 0.29
MAP1LC3B-206ENST00000564844 S1PR3Q99500 378 aa16.88■□□□□ 0.29
MAP1LC3B-206ENST00000564844 NPY1RP25929 384 aa16.88■□□□□ 0.29
MAP1LC3B-206ENST00000564844 SLC24A4Q8NFF2 622 aa16.88■□□□□ 0.29
MAP1LC3B-206ENST00000564844 ZC2HC1AQ96GY0 325 aa16.88■□□□□ 0.29
MAP1LC3B-206ENST00000564844 GNB1LQ9BYB4 327 aa16.88■□□□□ 0.29
MAP1LC3B-206ENST00000564844 PCSK5Q92824 1860 aa16.87■□□□□ 0.29
MAP1LC3B-206ENST00000564844 APCSP02743 223 aa16.87■□□□□ 0.29
MAP1LC3B-206ENST00000564844 CX3CL1P78423 397 aa16.87■□□□□ 0.29
MAP1LC3B-206ENST00000564844 C6orf15Q6UXA7 325 aaPredicted RBP16.87■□□□□ 0.29
MAP1LC3B-206ENST00000564844 LYG1Q8N1E2 194 aa16.87■□□□□ 0.29
MAP1LC3B-206ENST00000564844 CD177Q8N6Q3 437 aa16.87■□□□□ 0.29
MAP1LC3B-206ENST00000564844 RPH3ALQ9UNE2 315 aa16.87■□□□□ 0.29
MAP1LC3B-206ENST00000564844 GGTLC3B5MD39 225 aa16.87■□□□□ 0.29
MAP1LC3B-206ENST00000564844 HSBP1O75506 76 aa16.87■□□□□ 0.29
MAP1LC3B-206ENST00000564844 ESDP10768 282 aa16.87■□□□□ 0.29
MAP1LC3B-206ENST00000564844 TSPOP30536 169 aa16.87■□□□□ 0.29
MAP1LC3B-206ENST00000564844 MFAP2P55001 183 aa16.87■□□□□ 0.29
MAP1LC3B-206ENST00000564844 WDR82Q6UXN9 313 aa16.86■□□□□ 0.29
MAP1LC3B-206ENST00000564844 NABP2Q9BQ15 211 aa16.86■□□□□ 0.29
MAP1LC3B-206ENST00000564844 INTS1Q8N201 2190 aaKnown RBP16.86■□□□□ 0.29
MAP1LC3B-206ENST00000564844 PLAUP00749 431 aa16.86■□□□□ 0.29
MAP1LC3B-206ENST00000564844 MORN5Q5VZ52 161 aa16.86■□□□□ 0.29
MAP1LC3B-206ENST00000564844 PMS2CLQ68D20 193 aa16.86■□□□□ 0.29
MAP1LC3B-206ENST00000564844 STUMQ69YW2 141 aa16.86■□□□□ 0.29
MAP1LC3B-206ENST00000564844 LRRC29Q8WV35 223 aa16.86■□□□□ 0.29
MAP1LC3B-206ENST00000564844 TRGV10A0A0A0MS01 117 aa16.85■□□□□ 0.29
MAP1LC3B-206ENST00000564844 PRRX1P54821 245 aa16.85■□□□□ 0.29
MAP1LC3B-206ENST00000564844 LEMD1Q68G75 181 aa16.85■□□□□ 0.29
MAP1LC3B-206ENST00000564844 TRAT1Q6PIZ9 186 aa16.85■□□□□ 0.29
MAP1LC3B-206ENST00000564844 ZNF439Q8NDP4 499 aa16.85■□□□□ 0.29
MAP1LC3B-206ENST00000564844 NANOS1Q8WY41 292 aaKnown RBP16.85■□□□□ 0.29
MAP1LC3B-206ENST00000564844 ENY2Q9NPA8 101 aa16.85■□□□□ 0.29
MAP1LC3B-206ENST00000564844 ZNF331Q9NQX6 463 aaPredicted RBP16.85■□□□□ 0.29
MAP1LC3B-206ENST00000564844 PRSS46E5RG02 174 aa16.85■□□□□ 0.29
MAP1LC3B-206ENST00000564844 MPDU1O75352 247 aa16.85■□□□□ 0.29
MAP1LC3B-206ENST00000564844 MT-CO2P00403 227 aa16.85■□□□□ 0.29
MAP1LC3B-206ENST00000564844 MRPL49Q13405 166 aaKnown RBP16.85■□□□□ 0.29
MAP1LC3B-206ENST00000564844 TNRC6BQ9UPQ9 1833 aaKnown RBP16.85■□□□□ 0.29
MAP1LC3B-206ENST00000564844 M0R2Z0 102 aa16.85■□□□□ 0.29
MAP1LC3B-206ENST00000564844 CD46P15529 392 aa16.85■□□□□ 0.29
MAP1LC3B-206ENST00000564844 MEOX1P50221 254 aa16.85■□□□□ 0.29
MAP1LC3B-206ENST00000564844 FOXA3P55318 350 aaPredicted RBP16.85■□□□□ 0.29
MAP1LC3B-206ENST00000564844 VAMP3Q15836 100 aa16.85■□□□□ 0.29
MAP1LC3B-206ENST00000564844 VHLLQ6RSH7 139 aa16.85■□□□□ 0.29
MAP1LC3B-206ENST00000564844 OR9G1Q8NH87 305 aa16.85■□□□□ 0.29
MAP1LC3B-206ENST00000564844 TECRQ9NZ01 308 aaKnown RBP16.85■□□□□ 0.29
MAP1LC3B-206ENST00000564844 CSMD1Q96PZ7 3565 aa16.85■□□□□ 0.29
MAP1LC3B-206ENST00000564844 IGKV1OR2-108A0A075B7D4 117 aa16.84■□□□□ 0.29
MAP1LC3B-206ENST00000564844 FAM214BQ7L5A3 538 aa16.84■□□□□ 0.29
MAP1LC3B-206ENST00000564844 IL19Q9UHD0 177 aa16.84■□□□□ 0.29
MAP1LC3B-206ENST00000564844 LSM4Q9Y4Z0 139 aaKnown RBP16.84■□□□□ 0.29
MAP1LC3B-206ENST00000564844 PTPRZ1P23471 2315 aaPredicted RBP16.84■□□□□ 0.29
MAP1LC3B-206ENST00000564844 RBX1P62877 108 aa16.83■□□□□ 0.29
MAP1LC3B-206ENST00000564844 RAB31Q13636 194 aa16.83■□□□□ 0.29
MAP1LC3B-206ENST00000564844 MORN2Q502X0 79 aa16.83■□□□□ 0.29
MAP1LC3B-206ENST00000564844 EBLN2Q6P2I7 272 aa16.83■□□□□ 0.29
MAP1LC3B-206ENST00000564844 ZNF503Q96F45 646 aa16.83■□□□□ 0.29
MAP1LC3B-206ENST00000564844 IGLL1P15814 213 aa16.83■□□□□ 0.28
MAP1LC3B-206ENST00000564844 IGHV1-2P23083 117 aa16.83■□□□□ 0.28
MAP1LC3B-206ENST00000564844 PRDX2P32119 198 aa16.83■□□□□ 0.28
MAP1LC3B-206ENST00000564844 SPRNQ5BIV9 151 aa16.83■□□□□ 0.28
MAP1LC3B-206ENST00000564844 SPATA12Q7Z6I5 190 aa16.83■□□□□ 0.28
MAP1LC3B-206ENST00000564844 DEFB108BQ8NET1 73 aa16.83■□□□□ 0.28
MAP1LC3B-206ENST00000564844 OR2Z1Q8NG97 314 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms