RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 P0C879 139 aa13.46□□□□□ -0.25
LINC00554-201ENST00000564841 GABRA2P47869 451 aa13.46□□□□□ -0.25
LINC00554-201ENST00000564841 RHOGP84095 191 aa13.46□□□□□ -0.25
LINC00554-201ENST00000564841 C1orf185Q5T7R7 199 aa13.46□□□□□ -0.25
LINC00554-201ENST00000564841 CPT1CQ8TCG5 803 aa13.46□□□□□ -0.25
LINC00554-201ENST00000564841 FAM173AQ9BQD7 235 aa13.46□□□□□ -0.25
LINC00554-201ENST00000564841 FAM234AQ9H0X4 552 aa13.46□□□□□ -0.25
LINC00554-201ENST00000564841 COL27A1Q8IZC6 1860 aaPredicted RBP13.46□□□□□ -0.25
LINC00554-201ENST00000564841 H0YJW9 148 aa13.46□□□□□ -0.26
LINC00554-201ENST00000564841 RAB29O14966 203 aa13.46□□□□□ -0.26
LINC00554-201ENST00000564841 SNAI2O43623 268 aa13.46□□□□□ -0.26
LINC00554-201ENST00000564841 CXorf1O96002 111 aa13.46□□□□□ -0.26
LINC00554-201ENST00000564841 APCSP02743 223 aa13.46□□□□□ -0.26
LINC00554-201ENST00000564841 MEOX1P50221 254 aa13.46□□□□□ -0.26
LINC00554-201ENST00000564841 PSG9Q00887 426 aa13.46□□□□□ -0.26
LINC00554-201ENST00000564841 HES4Q9HCC6 221 aa13.46□□□□□ -0.26
LINC00554-201ENST00000564841 ARL2-SNX15V9GYD0 113 aa13.46□□□□□ -0.26
LINC00554-201ENST00000564841 LINC00473A8K010 186 aa13.45□□□□□ -0.26
LINC00554-201ENST00000564841 GNG4P50150 75 aa13.45□□□□□ -0.26
LINC00554-201ENST00000564841 STPG3Q8N7X2 389 aa13.45□□□□□ -0.26
LINC00554-201ENST00000564841 NAA38Q9BRA0 125 aaKnown RBP13.45□□□□□ -0.26
LINC00554-201ENST00000564841 GGTLC1Q9BX51 225 aa13.45□□□□□ -0.26
LINC00554-201ENST00000564841 B4GALT7Q9UBV7 327 aa13.45□□□□□ -0.26
LINC00554-201ENST00000564841 OR2H2O95918 312 aa13.45□□□□□ -0.26
LINC00554-201ENST00000564841 OR9G9P0C7N8 305 aa13.45□□□□□ -0.26
LINC00554-201ENST00000564841 USF1P22415 310 aaPredicted RBP13.45□□□□□ -0.26
LINC00554-201ENST00000564841 NPY1RP25929 384 aa13.45□□□□□ -0.26
LINC00554-201ENST00000564841 LRRC10Q5BKY1 277 aa13.45□□□□□ -0.26
LINC00554-201ENST00000564841 GDF5OSQ5U4N7 250 aa13.45□□□□□ -0.26
LINC00554-201ENST00000564841 OR8B2Q96RD0 313 aa13.45□□□□□ -0.26
LINC00554-201ENST00000564841 IL19Q9UHD0 177 aa13.45□□□□□ -0.26
LINC00554-201ENST00000564841 H0Y8G0 127 aa13.45□□□□□ -0.26
LINC00554-201ENST00000564841 SPACA3Q8IXA5 215 aa13.45□□□□□ -0.26
LINC00554-201ENST00000564841 TPRX1Q8N7U7 411 aa13.45□□□□□ -0.26
LINC00554-201ENST00000564841 C1orf159Q96HA4 380 aa13.45□□□□□ -0.26
LINC00554-201ENST00000564841 LINC00479Q96M42 142 aa13.45□□□□□ -0.26
LINC00554-201ENST00000564841 ZNF391Q9UJN7 358 aa13.45□□□□□ -0.26
LINC00554-201ENST00000564841 HELTA6NFD8 242 aa13.44□□□□□ -0.26
LINC00554-201ENST00000564841 WISP2O76076 250 aa13.44□□□□□ -0.26
LINC00554-201ENST00000564841 IGHV3-13P01766 116 aa13.44□□□□□ -0.26
LINC00554-201ENST00000564841 IGHV3-7P01780 117 aa13.44□□□□□ -0.26
LINC00554-201ENST00000564841 LTC4SQ16873 150 aa13.44□□□□□ -0.26
LINC00554-201ENST00000564841 BVES-AS1Q5T3Y7 98 aa13.44□□□□□ -0.26
LINC00554-201ENST00000564841 Q6P435 159 aa13.44□□□□□ -0.26
LINC00554-201ENST00000564841 C19orf35Q6ZS72 473 aa13.44□□□□□ -0.26
LINC00554-201ENST00000564841 RAB1CQ92928 201 aa13.44□□□□□ -0.26
LINC00554-201ENST00000564841 PMCHL2Q9BQD1 86 aa13.44□□□□□ -0.26
LINC00554-201ENST00000564841 GCM1Q9NP62 436 aa13.44□□□□□ -0.26
LINC00554-201ENST00000564841 ROS1P08922 2347 aa13.44□□□□□ -0.26
LINC00554-201ENST00000564841 A0A087X0K7 114 aa13.44□□□□□ -0.26
LINC00554-201ENST00000564841 LRP5LA4QPB2 252 aa13.44□□□□□ -0.26
LINC00554-201ENST00000564841 C2orf70A6NJV1 201 aa13.44□□□□□ -0.26
LINC00554-201ENST00000564841 S100A7AQ86SG5 101 aa13.44□□□□□ -0.26
LINC00554-201ENST00000564841 CXorf67Q86X51 503 aaPredicted RBP13.44□□□□□ -0.26
LINC00554-201ENST00000564841 RFESDQ8TAC1 157 aa13.44□□□□□ -0.26
LINC00554-201ENST00000564841 MIR17HGQ75NE6 70 aa13.43□□□□□ -0.26
LINC00554-201ENST00000564841 OR5B3Q8NH48 314 aa13.43□□□□□ -0.26
LINC00554-201ENST00000564841 SPTBN4Q9H254 2564 aa13.43□□□□□ -0.26
LINC00554-201ENST00000564841 TPRP12270 2363 aaKnown RBP13.43□□□□□ -0.26
LINC00554-201ENST00000564841 TRAV9-1A0A075B6T8 112 aa13.43□□□□□ -0.26
LINC00554-201ENST00000564841 RNF212BA8MTL3 300 aa13.43□□□□□ -0.26
LINC00554-201ENST00000564841 WT1P19544 449 aaPredicted RBP13.43□□□□□ -0.26
LINC00554-201ENST00000564841 CLDN18P56856 261 aa13.43□□□□□ -0.26
LINC00554-201ENST00000564841 UBE2G1P62253 170 aa13.43□□□□□ -0.26
LINC00554-201ENST00000564841 EFNB3Q15768 340 aa13.43□□□□□ -0.26
LINC00554-201ENST00000564841 PNKDQ8N490 385 aa13.43□□□□□ -0.26
LINC00554-201ENST00000564841 OR2T6Q8NHC8 308 aa13.43□□□□□ -0.26
LINC00554-201ENST00000564841 FER1L6-AS2Q96M78 137 aa13.43□□□□□ -0.26
LINC00554-201ENST00000564841 TIMM8BQ9Y5J9 83 aaPredicted RBP13.43□□□□□ -0.26
LINC00554-201ENST00000564841 TRBV6-6A0A0A6YYG2 114 aa13.42□□□□□ -0.26
LINC00554-201ENST00000564841 AMY1AP04745 511 aa13.42□□□□□ -0.26
LINC00554-201ENST00000564841 SP1P08047 785 aa13.42□□□□□ -0.26
LINC00554-201ENST00000564841 OR10J4P0C629 311 aa13.42□□□□□ -0.26
LINC00554-201ENST00000564841 CAMPP49913 170 aa13.42□□□□□ -0.26
LINC00554-201ENST00000564841 TRBV9A0A0B4J1U6 114 aa13.42□□□□□ -0.26
LINC00554-201ENST00000564841 TRAV3A0A0B4J244 114 aa13.42□□□□□ -0.26
LINC00554-201ENST00000564841 OR4C46A6NHA9 309 aa13.42□□□□□ -0.26
LINC00554-201ENST00000564841 RNFT1Q5M7Z0 435 aa13.42□□□□□ -0.26
LINC00554-201ENST00000564841 WDR73Q6P4I2 378 aa13.42□□□□□ -0.26
LINC00554-201ENST00000564841 COLCA1Q6ZS62 124 aa13.42□□□□□ -0.26
LINC00554-201ENST00000564841 CORO2AQ92828 525 aa13.42□□□□□ -0.26
LINC00554-201ENST00000564841 PRDM14Q9GZV8 571 aa13.42□□□□□ -0.26
LINC00554-201ENST00000564841 TRGV10A0A0A0MS01 117 aa13.42□□□□□ -0.26
LINC00554-201ENST00000564841 ZNF497Q6ZNH5 498 aa13.42□□□□□ -0.26
LINC00554-201ENST00000564841 HEYLQ9NQ87 328 aaPredicted RBP13.42□□□□□ -0.26
LINC00554-201ENST00000564841 PSG5Q15238 335 aa13.41□□□□□ -0.26
LINC00554-201ENST00000564841 ZNF645Q8N7E2 425 aa13.41□□□□□ -0.26
LINC00554-201ENST00000564841 OR8B3Q8NGG8 313 aa13.41□□□□□ -0.26
LINC00554-201ENST00000564841 SF3B5Q9BWJ5 86 aaKnown RBP13.41□□□□□ -0.26
LINC00554-201ENST00000564841 TNFRSF19Q9NS68 423 aa13.41□□□□□ -0.26
LINC00554-201ENST00000564841 PIGBOS1A0A0B4J2F0 54 aa13.41□□□□□ -0.26
LINC00554-201ENST00000564841 MT-ND6P03923 174 aa13.41□□□□□ -0.26
LINC00554-201ENST00000564841 PCBD1P61457 104 aa13.41□□□□□ -0.26
LINC00554-201ENST00000564841 RHOBP62745 196 aa13.41□□□□□ -0.26
LINC00554-201ENST00000564841 FAM216AQ8WUB2 273 aa13.41□□□□□ -0.26
LINC00554-201ENST00000564841 HCFC1P51610 2035 aa13.4□□□□□ -0.26
LINC00554-201ENST00000564841 OPRK1P41145 380 aa13.4□□□□□ -0.26
LINC00554-201ENST00000564841 MFAP2P55001 183 aa13.4□□□□□ -0.26
LINC00554-201ENST00000564841 FOXA3P55318 350 aaPredicted RBP13.4□□□□□ -0.26
LINC00554-201ENST00000564841 TBR1Q16650 682 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 774.1 ms