RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 RTL1A6NKG5 1358 aa1.59□□□□□ -2.16
UBR1-205ENST00000564540 SSH2Q76I76 1423 aa1.58□□□□□ -2.16
UBR1-205ENST00000564540 TRAV9-1A0A075B6T8 112 aa1.58□□□□□ -2.16
UBR1-205ENST00000564540 TRAV4A0A0B4J268 109 aa1.58□□□□□ -2.16
UBR1-205ENST00000564540 DPRXA6NFQ7 191 aa1.58□□□□□ -2.16
UBR1-205ENST00000564540 CLDN25C9JDP6 229 aa1.58□□□□□ -2.16
UBR1-205ENST00000564540 LEPROTO15243 131 aa1.58□□□□□ -2.16
UBR1-205ENST00000564540 LGALS1P09382 135 aaKnown RBP1.58□□□□□ -2.16
UBR1-205ENST00000564540 TFPTP0C1Z6 253 aa1.58□□□□□ -2.16
UBR1-205ENST00000564540 PPIBP23284 216 aaKnown RBP1.58□□□□□ -2.16
UBR1-205ENST00000564540 PHBP35232 272 aa1.58□□□□□ -2.16
UBR1-205ENST00000564540 GLRXP35754 106 aa1.58□□□□□ -2.16
UBR1-205ENST00000564540 CSN1S1P47710 185 aa1.58□□□□□ -2.16
UBR1-205ENST00000564540 ATP5G3P48201 142 aa1.58□□□□□ -2.16
UBR1-205ENST00000564540 TAS2R20P59543 309 aa1.58□□□□□ -2.16
UBR1-205ENST00000564540 NCALDP61601 193 aa1.58□□□□□ -2.16
UBR1-205ENST00000564540 RHOBP62745 196 aa1.58□□□□□ -2.16
UBR1-205ENST00000564540 ZNF117Q03924 483 aa1.58□□□□□ -2.16
UBR1-205ENST00000564540 AKR1C8PQ5T2L2 129 aa1.58□□□□□ -2.16
UBR1-205ENST00000564540 Q6ZS52 159 aa1.58□□□□□ -2.16
UBR1-205ENST00000564540 C2orf91Q6ZV80 131 aa1.58□□□□□ -2.16
UBR1-205ENST00000564540 SMCR5Q8TEV8 140 aa1.58□□□□□ -2.16
UBR1-205ENST00000564540 H1FXQ92522 213 aaKnown RBP1.58□□□□□ -2.16
UBR1-205ENST00000564540 GPR146Q96CH1 333 aa1.58□□□□□ -2.16
UBR1-205ENST00000564540 OR8B2Q96RD0 313 aa1.58□□□□□ -2.16
UBR1-205ENST00000564540 MND1Q9BWT6 205 aa1.58□□□□□ -2.16
UBR1-205ENST00000564540 SH3BGRL3Q9H299 93 aa1.58□□□□□ -2.16
UBR1-205ENST00000564540 C8orf4Q9NR00 106 aa1.58□□□□□ -2.16
UBR1-205ENST00000564540 IL36BQ9NZH7 164 aa1.58□□□□□ -2.16
UBR1-205ENST00000564540 FUT9Q9Y231 359 aa1.58□□□□□ -2.16
UBR1-205ENST00000564540 PRRC2BQ5JSZ5 2229 aaKnown RBP1.58□□□□□ -2.16
UBR1-205ENST00000564540 MIA2Q96PC5 1412 aa1.57□□□□□ -2.16
UBR1-205ENST00000564540 NEO1Q92859 1461 aa1.57□□□□□ -2.16
UBR1-205ENST00000564540 CACNA1SQ13698 1873 aa1.57□□□□□ -2.16
UBR1-205ENST00000564540 IGHV3-15A0A0B4J1V0 119 aa1.57□□□□□ -2.16
UBR1-205ENST00000564540 TRAV41A0A0B4J266 112 aa1.57□□□□□ -2.16
UBR1-205ENST00000564540 GRIFINA4D1Z8 144 aa1.57□□□□□ -2.16
UBR1-205ENST00000564540 VPS37CA5D8V6 355 aaPredicted RBP1.57□□□□□ -2.16
UBR1-205ENST00000564540 G3V2T6 193 aa1.57□□□□□ -2.16
UBR1-205ENST00000564540 CPSF4O95639 269 aaKnown RBP1.57□□□□□ -2.16
UBR1-205ENST00000564540 CRHP06850 196 aa1.57□□□□□ -2.16
UBR1-205ENST00000564540 IFI30P13284 250 aa1.57□□□□□ -2.16
UBR1-205ENST00000564540 SPI1P17947 270 aa1.57□□□□□ -2.16
UBR1-205ENST00000564540 SRIP30626 198 aa1.57□□□□□ -2.16
UBR1-205ENST00000564540 CD200P41217 278 aa1.57□□□□□ -2.16
UBR1-205ENST00000564540 GABRA4P48169 554 aa1.57□□□□□ -2.16
UBR1-205ENST00000564540 ZNF80P51504 273 aaPredicted RBP1.57□□□□□ -2.16
UBR1-205ENST00000564540 RWDD2BP57060 319 aa1.57□□□□□ -2.16
UBR1-205ENST00000564540 FXYD7P58549 80 aa1.57□□□□□ -2.16
UBR1-205ENST00000564540 ZNF141Q15928 474 aa1.57□□□□□ -2.16
UBR1-205ENST00000564540 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.57□□□□□ -2.16
UBR1-205ENST00000564540 AADACL3Q5VUY0 350 aa1.57□□□□□ -2.16
UBR1-205ENST00000564540 OR13C4Q8NGS5 318 aa1.57□□□□□ -2.16
UBR1-205ENST00000564540 ZNF675Q8TD23 568 aa1.57□□□□□ -2.16
UBR1-205ENST00000564540 DERL1Q9BUN8 251 aa1.57□□□□□ -2.16
UBR1-205ENST00000564540 OR8D2Q9GZM6 311 aa1.57□□□□□ -2.16
UBR1-205ENST00000564540 LYRM2Q9NU23 88 aaPredicted RBP1.57□□□□□ -2.16
UBR1-205ENST00000564540 TVP23BQ9NYZ1 205 aa1.57□□□□□ -2.16
UBR1-205ENST00000564540 AMMECR1Q9Y4X0 333 aaPredicted RBP1.57□□□□□ -2.16
UBR1-205ENST00000564540 RBM7Q9Y580 266 aaKnown RBP1.57□□□□□ -2.16
UBR1-205ENST00000564540 ZNF638Q14966 1978 aaKnown RBP1.57□□□□□ -2.16
UBR1-205ENST00000564540 SCN10AQ9Y5Y9 1956 aa1.57□□□□□ -2.16
UBR1-205ENST00000564540 SHANK3Q9BYB0 1731 aa1.57□□□□□ -2.16
UBR1-205ENST00000564540 SIPA1L1O43166 1804 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 ZCCHC6Q5VYS8 1495 aaKnown RBP1.56□□□□□ -2.16
UBR1-205ENST00000564540 LCTP09848 1927 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 A0A1W2PQD3 144 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 FUOMA2VDF0 154 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 MAP1LC3B2A6NCE7 125 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 GGT3PA6NGU5 568 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 TRAPPC2LH3BP13 241 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 BUB1B-PAK6H3BSN5 160 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 H7C1C5 153 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 TXNDC9O14530 226 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 PIAS1O75925 651 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 OR2J2O76002 312 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 NDUFC2O95298 119 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 NPYP01303 97 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 GZMBP10144 247 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 HIST1H2BOP23527 126 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 HLA-DMBP28068 263 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 BLVRBP30043 206 aaPredicted RBP1.56□□□□□ -2.16
UBR1-205ENST00000564540 ALDH3A1P30838 453 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 HIST1H2BBP33778 126 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 XCL1P47992 114 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 HIST1H2BDP58876 126 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 ARPC4P59998 168 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 LCN6P62502 163 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 HIST1H2BCP62807 126 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 RPL18Q07020 188 aaKnown RBP1.56□□□□□ -2.16
UBR1-205ENST00000564540 FOXF1Q12946 379 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 KISS1Q15726 138 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 HIST2H2BEQ16778 126 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.56□□□□□ -2.16
UBR1-205ENST00000564540 TMEM78Q5T7P6 136 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 RPL22L1Q6P5R6 122 aaKnown RBP1.56□□□□□ -2.16
UBR1-205ENST00000564540 DCUN1D2Q6PH85 259 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 MSRB3Q8IXL7 192 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 OR52R1Q8NGF1 315 aa1.56□□□□□ -2.16
UBR1-205ENST00000564540 OR10D4PQ8NGN7 298 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms