RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 OR5B3Q8NH48 314 aa13.27□□□□□ -0.29
NME3-205ENST00000563854 OR4A16Q8NH70 328 aa13.27□□□□□ -0.29
NME3-205ENST00000563854 MARC2Q969Z3 335 aa13.27□□□□□ -0.29
NME3-205ENST00000563854 C20orf24Q9BUV8 137 aa13.27□□□□□ -0.29
NME3-205ENST00000563854 PPP5CP53041 499 aa13.26□□□□□ -0.29
NME3-205ENST00000563854 UCP3P55916 312 aa13.26□□□□□ -0.29
NME3-205ENST00000563854 CTF1Q16619 201 aa13.26□□□□□ -0.29
NME3-205ENST00000563854 OR52I2Q8NH67 350 aa13.26□□□□□ -0.29
NME3-205ENST00000563854 SCARB1Q8WTV0 552 aa13.26□□□□□ -0.29
NME3-205ENST00000563854 TMEM190Q8WZ59 177 aa13.26□□□□□ -0.29
NME3-205ENST00000563854 MISP3Q96FF7 219 aa13.26□□□□□ -0.29
NME3-205ENST00000563854 BSCL2Q96G97 398 aaPredicted RBP13.26□□□□□ -0.29
NME3-205ENST00000563854 ZNF436Q9C0F3 470 aaPredicted RBP13.26□□□□□ -0.29
NME3-205ENST00000563854 TMEM14BQ9NUH8 114 aa13.26□□□□□ -0.29
NME3-205ENST00000563854 MRPL27Q9P0M9 148 aaKnown RBP13.26□□□□□ -0.29
NME3-205ENST00000563854 KLK11Q9UBX7 282 aa13.26□□□□□ -0.29
NME3-205ENST00000563854 ZNF207O43670 478 aaKnown RBP13.25□□□□□ -0.29
NME3-205ENST00000563854 IGKV1-39P01597 117 aa13.25□□□□□ -0.29
NME3-205ENST00000563854 IGKV1D-39P04432 117 aa13.25□□□□□ -0.29
NME3-205ENST00000563854 ZNF182P17025 639 aaPredicted RBP13.25□□□□□ -0.29
NME3-205ENST00000563854 ANKRD55Q3KP44 614 aa13.25□□□□□ -0.29
NME3-205ENST00000563854 OR1L6Q8NGR2 347 aa13.25□□□□□ -0.29
NME3-205ENST00000563854 SEC22AQ96IW7 307 aa13.25□□□□□ -0.29
NME3-205ENST00000563854 CHRDL1Q9BU40 450 aa13.25□□□□□ -0.29
NME3-205ENST00000563854 K7EIM0 57 aa13.24□□□□□ -0.29
NME3-205ENST00000563854 CD3DP04234 171 aa13.24□□□□□ -0.29
NME3-205ENST00000563854 ELLP55199 621 aaPredicted RBP13.24□□□□□ -0.29
NME3-205ENST00000563854 IZUMO4Q1ZYL8 232 aa13.24□□□□□ -0.29
NME3-205ENST00000563854 SPINK9Q5DT21 86 aa13.24□□□□□ -0.29
NME3-205ENST00000563854 SPSB3Q6PJ21 355 aa13.24□□□□□ -0.29
NME3-205ENST00000563854 CADM3Q8N126 398 aa13.24□□□□□ -0.29
NME3-205ENST00000563854 DAZ1Q9NQZ3 744 aaKnown RBP13.24□□□□□ -0.29
NME3-205ENST00000563854 FAM212BQ9NTI7 297 aaPredicted RBP13.24□□□□□ -0.29
NME3-205ENST00000563854 RGS5O15539 181 aa13.23□□□□□ -0.29
NME3-205ENST00000563854 C8orf88P0DMB2 117 aa13.23□□□□□ -0.29
NME3-205ENST00000563854 AKR1C2P52895 323 aa13.23□□□□□ -0.29
NME3-205ENST00000563854 PIGPP57054 158 aa13.23□□□□□ -0.29
NME3-205ENST00000563854 OR1P1Q8NH06 330 aa13.23□□□□□ -0.29
NME3-205ENST00000563854 PINX1Q96BK5 328 aaKnown RBP13.23□□□□□ -0.29
NME3-205ENST00000563854 UBQLN2Q9UHD9 624 aa13.23□□□□□ -0.29
NME3-205ENST00000563854 TRAV25A0A0B4J276 109 aa13.22□□□□□ -0.29
NME3-205ENST00000563854 F8W735 103 aaPredicted RBP13.22□□□□□ -0.29
NME3-205ENST00000563854 NDUFA4O00483 81 aa13.22□□□□□ -0.29
NME3-205ENST00000563854 IGHV3-48P01763 117 aa13.22□□□□□ -0.29
NME3-205ENST00000563854 ADMP35318 185 aa13.22□□□□□ -0.29
NME3-205ENST00000563854 PRCDQ00LT1 54 aa13.22□□□□□ -0.29
NME3-205ENST00000563854 SCGB2B2Q4G0G5 96 aa13.22□□□□□ -0.29
NME3-205ENST00000563854 GPR141Q7Z602 305 aa13.22□□□□□ -0.29
NME3-205ENST00000563854 OR2C3Q8N628 320 aa13.22□□□□□ -0.29
NME3-205ENST00000563854 OR4D10Q8NGI6 311 aa13.22□□□□□ -0.29
NME3-205ENST00000563854 ABHD1Q96SE0 405 aa13.22□□□□□ -0.29
NME3-205ENST00000563854 GGTLC1Q9BX51 225 aa13.22□□□□□ -0.29
NME3-205ENST00000563854 MRPS26Q9BYN8 205 aaKnown RBP13.22□□□□□ -0.29
NME3-205ENST00000563854 MTFP1Q9UDX5 166 aa13.22□□□□□ -0.29
NME3-205ENST00000563854 LOC102724200A0A096LPH7 203 aaPredicted RBP13.21□□□□□ -0.29
NME3-205ENST00000563854 NUPL2O15504 423 aaKnown RBP13.21□□□□□ -0.29
NME3-205ENST00000563854 YIF1AO95070 293 aa13.21□□□□□ -0.29
NME3-205ENST00000563854 RND3P61587 244 aa13.21□□□□□ -0.29
NME3-205ENST00000563854 TRIM16LQ309B1 348 aa13.21□□□□□ -0.29
NME3-205ENST00000563854 ARRDC1Q8N5I2 433 aa13.21□□□□□ -0.29
NME3-205ENST00000563854 ZNF486Q96H40 463 aaPredicted RBP13.21□□□□□ -0.29
NME3-205ENST00000563854 TP53RKQ96S44 253 aa13.21□□□□□ -0.29
NME3-205ENST00000563854 C5orf66Q9H5L9 145 aa13.21□□□□□ -0.29
NME3-205ENST00000563854 DYNC2H1Q8NCM8 4307 aaKnown RBP13.2□□□□□ -0.3
NME3-205ENST00000563854 RAB3DO95716 219 aa13.2□□□□□ -0.3
NME3-205ENST00000563854 MT-CO2P00403 227 aa13.2□□□□□ -0.3
NME3-205ENST00000563854 TBPP20226 339 aa13.2□□□□□ -0.3
NME3-205ENST00000563854 MFAP4P55083 255 aa13.2□□□□□ -0.3
NME3-205ENST00000563854 HSPE1P61604 102 aaKnown RBP13.2□□□□□ -0.3
NME3-205ENST00000563854 ERHP84090 104 aaKnown RBP13.2□□□□□ -0.3
NME3-205ENST00000563854 RELQ04864 619 aaPredicted RBP13.2□□□□□ -0.3
NME3-205ENST00000563854 SP6Q3SY56 376 aa13.2□□□□□ -0.3
NME3-205ENST00000563854 LAMTOR1Q6IAA8 161 aa13.2□□□□□ -0.3
NME3-205ENST00000563854 LHFPL1Q86WI0 220 aa13.2□□□□□ -0.3
NME3-205ENST00000563854 SLC35G3Q8N808 338 aa13.2□□□□□ -0.3
NME3-205ENST00000563854 RNASE11Q8TAA1 199 aaKnown RBP13.2□□□□□ -0.3
NME3-205ENST00000563854 ATP6V0BQ99437 205 aa13.2□□□□□ -0.3
NME3-205ENST00000563854 SPAG8Q99932 426 aaPredicted RBP13.2□□□□□ -0.3
NME3-205ENST00000563854 MIXL1Q9H2W2 232 aa13.2□□□□□ -0.3
NME3-205ENST00000563854 COPZ2Q9P299 210 aa13.2□□□□□ -0.3
NME3-205ENST00000563854 TENM2Q9NT68 2774 aa13.19□□□□□ -0.3
NME3-205ENST00000563854 IGHV3-49A0A0A0MS15 119 aa13.19□□□□□ -0.3
NME3-205ENST00000563854 LCE6AA0A183 80 aa13.19□□□□□ -0.3
NME3-205ENST00000563854 C3orf85A0A1B0GTC6 90 aa13.19□□□□□ -0.3
NME3-205ENST00000563854 IFNA17P01571 189 aa13.19□□□□□ -0.3
NME3-205ENST00000563854 IGKV1-5P01602 117 aa13.19□□□□□ -0.3
NME3-205ENST00000563854 TAS2R19P59542 299 aa13.19□□□□□ -0.3
NME3-205ENST00000563854 SPCS2Q15005 226 aa13.19□□□□□ -0.3
NME3-205ENST00000563854 FAAP20Q6NZ36 180 aa13.19□□□□□ -0.3
NME3-205ENST00000563854 CCDC71LQ8N9Z2 235 aa13.19□□□□□ -0.3
NME3-205ENST00000563854 TMEM229BQ8NBD8 167 aa13.19□□□□□ -0.3
NME3-205ENST00000563854 OR13C8Q8NGS7 320 aa13.19□□□□□ -0.3
NME3-205ENST00000563854 C15orf40Q8WUR7 153 aa13.19□□□□□ -0.3
NME3-205ENST00000563854 PDCD10Q9BUL8 212 aa13.19□□□□□ -0.3
NME3-205ENST00000563854 RYR2Q92736 4967 aa13.18□□□□□ -0.3
NME3-205ENST00000563854 I3L2K1 104 aa13.18□□□□□ -0.3
NME3-205ENST00000563854 TSPAN4O14817 238 aa13.18□□□□□ -0.3
NME3-205ENST00000563854 GNG7O60262 68 aa13.18□□□□□ -0.3
NME3-205ENST00000563854 CTSDP07339 412 aaPredicted RBP13.18□□□□□ -0.3
NME3-205ENST00000563854 CTSGP08311 255 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms