RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 BRWD1-AS2P59051 145 aa3.68□□□□□ -1.82
CDR2-203ENST00000563573 UBE2KP61086 200 aa3.68□□□□□ -1.82
CDR2-203ENST00000563573 VAMP2P63027 116 aa3.68□□□□□ -1.82
CDR2-203ENST00000563573 RPP30P78346 268 aaKnown RBP3.68□□□□□ -1.82
CDR2-203ENST00000563573 HNF4GQ14541 408 aa3.68□□□□□ -1.82
CDR2-203ENST00000563573 PLGLAQ15195 96 aa3.68□□□□□ -1.82
CDR2-203ENST00000563573 ZFP69Q49AA0 526 aa3.68□□□□□ -1.82
CDR2-203ENST00000563573 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.68□□□□□ -1.82
CDR2-203ENST00000563573 BRD3OSQ6XYD6 125 aa3.68□□□□□ -1.82
CDR2-203ENST00000563573 SSX9Q7RTT3 188 aa3.68□□□□□ -1.82
CDR2-203ENST00000563573 ZNF546Q86UE3 836 aa3.68□□□□□ -1.82
CDR2-203ENST00000563573 MMD2Q8IY49 270 aa3.68□□□□□ -1.82
CDR2-203ENST00000563573 TCTE3Q8IZS6 198 aa3.68□□□□□ -1.82
CDR2-203ENST00000563573 CIARTQ8N365 385 aaPredicted RBP3.68□□□□□ -1.82
CDR2-203ENST00000563573 TEX45Q8NA69 505 aa3.68□□□□□ -1.82
CDR2-203ENST00000563573 INO80EQ8NBZ0 244 aaPredicted RBP3.68□□□□□ -1.82
CDR2-203ENST00000563573 OR8H1Q8NGG4 311 aa3.68□□□□□ -1.82
CDR2-203ENST00000563573 OR2T35Q8NGX2 323 aa3.68□□□□□ -1.82
CDR2-203ENST00000563573 LHFPL5Q8TAF8 219 aa3.68□□□□□ -1.82
CDR2-203ENST00000563573 HYLS1Q96M11 299 aa3.68□□□□□ -1.82
CDR2-203ENST00000563573 HARBI1Q96MB7 349 aa3.68□□□□□ -1.82
CDR2-203ENST00000563573 SSX3Q99909 188 aa3.68□□□□□ -1.82
CDR2-203ENST00000563573 RASL11BQ9BPW5 248 aa3.68□□□□□ -1.82
CDR2-203ENST00000563573 COMMD5Q9GZQ3 224 aa3.68□□□□□ -1.82
CDR2-203ENST00000563573 SEPSECSQ9HD40 501 aaKnown RBP3.68□□□□□ -1.82
CDR2-203ENST00000563573 ENY2Q9NPA8 101 aa3.68□□□□□ -1.82
CDR2-203ENST00000563573 COA4Q9NYJ1 87 aa3.68□□□□□ -1.82
CDR2-203ENST00000563573 BET1LQ9NYM9 111 aa3.68□□□□□ -1.82
CDR2-203ENST00000563573 PITPNC1Q9UKF7 332 aa3.68□□□□□ -1.82
CDR2-203ENST00000563573 PRNDQ9UKY0 176 aa3.68□□□□□ -1.82
CDR2-203ENST00000563573 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.68□□□□□ -1.824e-8■■■□□ 16.1
CDR2-203ENST00000563573 CREBBPQ92793 2442 aa3.68□□□□□ -1.82
CDR2-203ENST00000563573 A0A0U1RQK1 487 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 A0A1W2PPI3 338 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 RPS10-NUDT3A0A1W2PQS6 291 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 BTBD17A6NE02 478 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 GAGE12JA6NER3 117 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 CEBPZOSA8MTT3 80 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 E5RGE8 158 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 UPK2O00526 184 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 NBR2O15453 112 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 CHST1O43916 411 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 GPR137BO60478 399 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 KBTBD11O94819 623 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 CNIH1O95406 144 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 MPC2O95563 127 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 IGKV1-5P01602 117 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 C1QBP02746 253 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 IGKV1-16P04430 117 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 SLC25A4P12235 298 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 CD99P14209 185 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 C4BPBP20851 252 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 MAS1LP35410 378 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 DYNLT3P51808 116 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 S100A10P60903 97 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 SPCS3P61009 180 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 HSPE1P61604 102 aaKnown RBP3.67□□□□□ -1.82
CDR2-203ENST00000563573 RPL23AP62750 156 aaKnown RBP3.67□□□□□ -1.82
CDR2-203ENST00000563573 ERHP84090 104 aaKnown RBP3.67□□□□□ -1.82
CDR2-203ENST00000563573 EBI3Q14213 229 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 PSG5Q15238 335 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 AANATQ16613 207 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 POU2AF1Q16633 256 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 LRRC75BQ2VPJ9 315 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 LRRC37A5PQ49AS3 106 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 NMSQ5H8A3 153 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 KLF17Q5JT82 389 aaPredicted RBP3.67□□□□□ -1.82
CDR2-203ENST00000563573 OR4A47Q6IF82 309 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 KRTAP5-11Q6L8G4 156 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 RBMS3Q6XE24 437 aaKnown RBP3.67□□□□□ -1.82
CDR2-203ENST00000563573 SPNS3Q6ZMD2 512 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 C9orf139Q6ZV77 190 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 NOXA1Q86UR1 476 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 ZNF429Q86V71 674 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 PPP1R27Q86WC6 154 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 LURAP1LQ8IV03 231 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 FOXRED2Q8IWF2 684 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 VKORC1L1Q8N0U8 176 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 PUSL1Q8N0Z8 303 aaKnown RBP3.67□□□□□ -1.82
CDR2-203ENST00000563573 OR4D5Q8NGN0 318 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 OR52E5Q8NH55 327 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 PPP1R1CQ8WVI7 109 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 ST6GAL2Q96JF0 529 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 CIB3Q96Q77 187 aaPredicted RBP3.67□□□□□ -1.82
CDR2-203ENST00000563573 SLC25A31Q9H0C2 315 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 ZC4H2Q9NQZ6 224 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 TMEM160Q9NX00 188 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 METTL1Q9UBP6 276 aaKnown RBP3.67□□□□□ -1.82
CDR2-203ENST00000563573 CACNG5Q9UF02 275 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 NSG2Q9Y328 171 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 LSM5Q9Y4Y9 91 aaKnown RBP3.67□□□□□ -1.82
CDR2-203ENST00000563573 OR51B2Q9Y5P1 312 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 POMT1Q9Y6A1 747 aa3.67□□□□□ -1.82
CDR2-203ENST00000563573 ANK3Q12955 4377 aaKnown RBP3.66□□□□□ -1.82
CDR2-203ENST00000563573 A0A0G2JRQ6 117 aa3.66□□□□□ -1.82
CDR2-203ENST00000563573 TEX50A0A1B0GTY4 177 aa3.66□□□□□ -1.82
CDR2-203ENST00000563573 A0A1W2PN81 502 aa3.66□□□□□ -1.82
CDR2-203ENST00000563573 C15orf61A6NNL5 157 aa3.66□□□□□ -1.82
CDR2-203ENST00000563573 SRRM4A7MD48 611 aaKnown RBP3.66□□□□□ -1.82
CDR2-203ENST00000563573 HMSDA8MTL9 139 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms