RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 SRSF8Q9BRL6 282 aaKnown RBP12.45□□□□□ -0.42
HDGFL3-203ENST00000563404 AIFM2Q9BRQ8 373 aa12.45□□□□□ -0.42
HDGFL3-203ENST00000563404 TP53TG1Q9Y2A0 90 aa12.45□□□□□ -0.42
HDGFL3-203ENST00000563404 HERC2O95714 4834 aa12.44□□□□□ -0.42
HDGFL3-203ENST00000563404 OR2T8A6NH00 312 aa12.44□□□□□ -0.42
HDGFL3-203ENST00000563404 F8W735 103 aaPredicted RBP12.44□□□□□ -0.42
HDGFL3-203ENST00000563404 TSPAN4O14817 238 aa12.44□□□□□ -0.42
HDGFL3-203ENST00000563404 BMI1P35226 326 aa12.44□□□□□ -0.42
HDGFL3-203ENST00000563404 SSBP1Q04837 148 aaKnown RBP12.44□□□□□ -0.42
HDGFL3-203ENST00000563404 SPANXN2Q5MJ10 180 aa12.44□□□□□ -0.42
HDGFL3-203ENST00000563404 CEMP1Q6PRD7 247 aaPredicted RBP12.44□□□□□ -0.42
HDGFL3-203ENST00000563404 GDPD1Q8N9F7 314 aa12.44□□□□□ -0.42
HDGFL3-203ENST00000563404 OR51H1Q8NH63 302 aa12.44□□□□□ -0.42
HDGFL3-203ENST00000563404 VN1R17PQ8TDU5 208 aa12.44□□□□□ -0.42
HDGFL3-203ENST00000563404 ZNF414Q96IQ9 312 aa12.44□□□□□ -0.42
HDGFL3-203ENST00000563404 ABHD1Q96SE0 405 aa12.44□□□□□ -0.42
HDGFL3-203ENST00000563404 CHRDL1Q9BU40 450 aa12.44□□□□□ -0.42
HDGFL3-203ENST00000563404 QTRT1Q9BXR0 403 aaKnown RBP12.44□□□□□ -0.42
HDGFL3-203ENST00000563404 COMMD5Q9GZQ3 224 aa12.44□□□□□ -0.42
HDGFL3-203ENST00000563404 ANAPC10Q9UM13 185 aa12.44□□□□□ -0.42
HDGFL3-203ENST00000563404 DNAH6Q9C0G6 4158 aa12.44□□□□□ -0.42
HDGFL3-203ENST00000563404 IGHV3OR16-8A0A075B7F1 116 aa12.43□□□□□ -0.42
HDGFL3-203ENST00000563404 IGHV3-21A0A0B4J1V1 117 aa12.43□□□□□ -0.42
HDGFL3-203ENST00000563404 TEX50A0A1B0GTY4 177 aa12.43□□□□□ -0.42
HDGFL3-203ENST00000563404 NUPR2A6NF83 97 aa12.43□□□□□ -0.42
HDGFL3-203ENST00000563404 GABARAPH6UMI1 98 aa12.43□□□□□ -0.42
HDGFL3-203ENST00000563404 SERPINE2P07093 398 aa12.43□□□□□ -0.42
HDGFL3-203ENST00000563404 NAT1P18440 290 aa12.43□□□□□ -0.42
HDGFL3-203ENST00000563404 APOC4P55056 127 aa12.43□□□□□ -0.42
HDGFL3-203ENST00000563404 CATR1Q13166 79 aa12.43□□□□□ -0.42
HDGFL3-203ENST00000563404 SLC38A6Q8IZM9 456 aa12.43□□□□□ -0.42
HDGFL3-203ENST00000563404 GIMAP1Q8WWP7 306 aa12.43□□□□□ -0.42
HDGFL3-203ENST00000563404 KRTAP17-1Q9BYP8 105 aa12.43□□□□□ -0.42
HDGFL3-203ENST00000563404 PLEKHA2Q9HB19 425 aa12.43□□□□□ -0.42
HDGFL3-203ENST00000563404 THYN1Q9P016 225 aa12.43□□□□□ -0.42
HDGFL3-203ENST00000563404 HECTD4Q9Y4D8 3996 aa12.42□□□□□ -0.42
HDGFL3-203ENST00000563404 GSTZ1O43708 216 aaPredicted RBP12.42□□□□□ -0.42
HDGFL3-203ENST00000563404 FGF2P09038 288 aa12.42□□□□□ -0.42
HDGFL3-203ENST00000563404 TRAPPC2P0DI81 140 aa12.42□□□□□ -0.42
HDGFL3-203ENST00000563404 TRAPPC2BP0DI82 140 aa12.42□□□□□ -0.42
HDGFL3-203ENST00000563404 OR13C7P0DN81 318 aa12.42□□□□□ -0.42
HDGFL3-203ENST00000563404 GNRHRP30968 328 aa12.42□□□□□ -0.42
HDGFL3-203ENST00000563404 SLC25A24Q6NUK1 477 aa12.42□□□□□ -0.42
HDGFL3-203ENST00000563404 TMEM17Q86X19 198 aa12.42□□□□□ -0.42
HDGFL3-203ENST00000563404 DMBX1Q8NFW5 382 aa12.42□□□□□ -0.42
HDGFL3-203ENST00000563404 FCAMRQ8WWV6 532 aa12.42□□□□□ -0.42
HDGFL3-203ENST00000563404 RNF183Q96D59 192 aa12.42□□□□□ -0.42
HDGFL3-203ENST00000563404 DAZ1Q9NQZ3 744 aaKnown RBP12.42□□□□□ -0.42
HDGFL3-203ENST00000563404 MEIS3P1A6NDR6 274 aa12.41□□□□□ -0.42
HDGFL3-203ENST00000563404 ZNF207O43670 478 aaKnown RBP12.41□□□□□ -0.42
HDGFL3-203ENST00000563404 RPL35AP18077 110 aaKnown RBP12.41□□□□□ -0.42
HDGFL3-203ENST00000563404 ADMP35318 185 aa12.41□□□□□ -0.42
HDGFL3-203ENST00000563404 IL18Q14116 193 aa12.41□□□□□ -0.42
HDGFL3-203ENST00000563404 AADACL3Q5VUY0 350 aa12.41□□□□□ -0.42
HDGFL3-203ENST00000563404 SNX29P2Q8IUI4 249 aa12.41□□□□□ -0.42
HDGFL3-203ENST00000563404 OR5AP2Q8NGF4 316 aa12.41□□□□□ -0.42
HDGFL3-203ENST00000563404 SCARB1Q8WTV0 552 aa12.41□□□□□ -0.42
HDGFL3-203ENST00000563404 SMIM4Q8WVI0 70 aa12.41□□□□□ -0.42
HDGFL3-203ENST00000563404 S100ZQ8WXG8 99 aa12.41□□□□□ -0.42
HDGFL3-203ENST00000563404 BSCL2Q96G97 398 aaPredicted RBP12.41□□□□□ -0.42
HDGFL3-203ENST00000563404 NDUFA4L2Q9NRX3 87 aa12.41□□□□□ -0.42
HDGFL3-203ENST00000563404 COMMD9Q9P000 198 aa12.41□□□□□ -0.42
HDGFL3-203ENST00000563404 MTFP1Q9UDX5 166 aa12.41□□□□□ -0.42
HDGFL3-203ENST00000563404 V9GYH0 126 aa12.41□□□□□ -0.42
HDGFL3-203ENST00000563404 KIR2DL5BA0A0G2JN68 375 aa12.4□□□□□ -0.42
HDGFL3-203ENST00000563404 KIR2DL5BA0A0G2JPC4 375 aa12.4□□□□□ -0.42
HDGFL3-203ENST00000563404 K7EIM0 57 aa12.4□□□□□ -0.42
HDGFL3-203ENST00000563404 NDUFA4O00483 81 aa12.4□□□□□ -0.42
HDGFL3-203ENST00000563404 UBE2CO00762 179 aa12.4□□□□□ -0.42
HDGFL3-203ENST00000563404 ATF4P18848 351 aaPredicted RBP12.4□□□□□ -0.42
HDGFL3-203ENST00000563404 KIR2DL5AQ8N109 375 aa12.4□□□□□ -0.42
HDGFL3-203ENST00000563404 RPP25LQ8N5L8 163 aaKnown RBP12.4□□□□□ -0.42
HDGFL3-203ENST00000563404 KIR2DL5BQ8NHK3 375 aa12.4□□□□□ -0.42
HDGFL3-203ENST00000563404 NSG2Q9Y328 171 aa12.4□□□□□ -0.42
HDGFL3-203ENST00000563404 F11RQ9Y624 299 aaKnown RBP12.4□□□□□ -0.42
HDGFL3-203ENST00000563404 MARCH11A6NNE9 402 aa12.39□□□□□ -0.43
HDGFL3-203ENST00000563404 CTSDP07339 412 aaPredicted RBP12.39□□□□□ -0.43
HDGFL3-203ENST00000563404 TBPP20226 339 aa12.39□□□□□ -0.43
HDGFL3-203ENST00000563404 FCGR2BP31994 310 aaPredicted RBP12.39□□□□□ -0.43
HDGFL3-203ENST00000563404 RCVRNP35243 200 aa12.39□□□□□ -0.43
HDGFL3-203ENST00000563404 ZNF124Q15973 351 aa12.39□□□□□ -0.43
HDGFL3-203ENST00000563404 THOC7Q6I9Y2 204 aaKnown RBP12.39□□□□□ -0.43
HDGFL3-203ENST00000563404 LAMTOR1Q6IAA8 161 aa12.39□□□□□ -0.43
HDGFL3-203ENST00000563404 SPSB3Q6PJ21 355 aa12.39□□□□□ -0.43
HDGFL3-203ENST00000563404 STPG3Q8N7X2 389 aa12.39□□□□□ -0.43
HDGFL3-203ENST00000563404 OR1L8Q8NGR8 309 aa12.39□□□□□ -0.43
HDGFL3-203ENST00000563404 OR52I2Q8NH67 350 aa12.39□□□□□ -0.43
HDGFL3-203ENST00000563404 CD300LFQ8TDQ1 290 aa12.39□□□□□ -0.43
HDGFL3-203ENST00000563404 DEDD2Q8WXF8 326 aa12.39□□□□□ -0.43
HDGFL3-203ENST00000563404 C20orf24Q9BUV8 137 aa12.39□□□□□ -0.43
HDGFL3-203ENST00000563404 MAP6D1Q9H9H5 199 aa12.39□□□□□ -0.43
HDGFL3-203ENST00000563404 IFT46Q9NQC8 304 aa12.39□□□□□ -0.43
HDGFL3-203ENST00000563404 C21orf62Q9NYP8 219 aa12.39□□□□□ -0.43
HDGFL3-203ENST00000563404 K7EMT4 169 aa12.38□□□□□ -0.43
HDGFL3-203ENST00000563404 PGLYRP1O75594 196 aaPredicted RBP12.38□□□□□ -0.43
HDGFL3-203ENST00000563404 RLN1P04808 185 aa12.38□□□□□ -0.43
HDGFL3-203ENST00000563404 RFX2P48378 723 aa12.38□□□□□ -0.43
HDGFL3-203ENST00000563404 DHRS11Q6UWP2 260 aa12.38□□□□□ -0.43
HDGFL3-203ENST00000563404 HSD17B13Q7Z5P4 300 aaPredicted RBP12.38□□□□□ -0.43
HDGFL3-203ENST00000563404 LYSMD2Q8IV50 215 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms