RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 MAPK3P27361 379 aaPredicted RBP5.41□□□□□ -1.54
HERPUD1-206ENST00000563343 PLA2G7Q13093 441 aa5.41□□□□□ -1.54
HERPUD1-206ENST00000563343 OXA1LQ15070 435 aa5.41□□□□□ -1.54
HERPUD1-206ENST00000563343 POU2AF1Q16633 256 aa5.41□□□□□ -1.54
HERPUD1-206ENST00000563343 SLC25A24Q6NUK1 477 aa5.41□□□□□ -1.54
HERPUD1-206ENST00000563343 ZNF773Q6PK81 442 aa5.41□□□□□ -1.54
HERPUD1-206ENST00000563343 MFSD4AQ8N468 514 aa5.41□□□□□ -1.54
HERPUD1-206ENST00000563343 UBAC2Q8NBM4 344 aa5.41□□□□□ -1.54
HERPUD1-206ENST00000563343 DUSP18Q8NEJ0 188 aa5.41□□□□□ -1.54
HERPUD1-206ENST00000563343 PHYHIPQ92561 330 aa5.41□□□□□ -1.54
HERPUD1-206ENST00000563343 HSD17B10Q99714 261 aaKnown RBP5.41□□□□□ -1.54
HERPUD1-206ENST00000563343 GINS4Q9BRT9 223 aa5.41□□□□□ -1.54
HERPUD1-206ENST00000563343 NIPSNAP3BQ9BS92 247 aa5.41□□□□□ -1.54
HERPUD1-206ENST00000563343 NXF2Q9GZY0 626 aaKnown RBP5.41□□□□□ -1.54
HERPUD1-206ENST00000563343 OR2W1Q9Y3N9 320 aa5.41□□□□□ -1.54
HERPUD1-206ENST00000563343 F11RQ9Y624 299 aaKnown RBP5.41□□□□□ -1.54
HERPUD1-206ENST00000563343 IGHV3-66A0A0C4DH42 116 aa5.4□□□□□ -1.54
HERPUD1-206ENST00000563343 MFNGO00587 321 aa5.4□□□□□ -1.54
HERPUD1-206ENST00000563343 ST8SIA3O43173 380 aa5.4□□□□□ -1.54
HERPUD1-206ENST00000563343 FGF2P09038 288 aa5.4□□□□□ -1.54
HERPUD1-206ENST00000563343 ZNF688P0C7X2 276 aa5.4□□□□□ -1.54
HERPUD1-206ENST00000563343 OR13C7P0DN81 318 aa5.4□□□□□ -1.54
HERPUD1-206ENST00000563343 CD36P16671 472 aa5.4□□□□□ -1.54
HERPUD1-206ENST00000563343 SUMO1P63165 101 aaKnown RBP5.4□□□□□ -1.54
HERPUD1-206ENST00000563343 GNGT1P63211 74 aa5.4□□□□□ -1.54
HERPUD1-206ENST00000563343 RELQ04864 619 aaPredicted RBP5.4□□□□□ -1.54
HERPUD1-206ENST00000563343 P2RY14Q15391 338 aa5.4□□□□□ -1.54
HERPUD1-206ENST00000563343 ACSM3Q53FZ2 586 aa5.4□□□□□ -1.54
HERPUD1-206ENST00000563343 Q56UQ5 140 aa5.4□□□□□ -1.54
HERPUD1-206ENST00000563343 ACTL10Q5JWF8 245 aa5.4□□□□□ -1.54
HERPUD1-206ENST00000563343 RBM48Q5RL73 367 aaKnown RBP5.4□□□□□ -1.54
HERPUD1-206ENST00000563343 FAM222AQ5U5X8 452 aa5.4□□□□□ -1.54
HERPUD1-206ENST00000563343 C15orf53Q8NAA6 179 aa5.4□□□□□ -1.54
HERPUD1-206ENST00000563343 SVIPQ8NHG7 77 aa5.4□□□□□ -1.54
HERPUD1-206ENST00000563343 DCANP1Q8TF63 244 aa5.4□□□□□ -1.54
HERPUD1-206ENST00000563343 TCTEX1D2Q8WW35 142 aa5.4□□□□□ -1.54
HERPUD1-206ENST00000563343 QTRT1Q9BXR0 403 aaKnown RBP5.4□□□□□ -1.54
HERPUD1-206ENST00000563343 XCL2Q9UBD3 114 aa5.4□□□□□ -1.54
HERPUD1-206ENST00000563343 SPATA2Q9UM82 520 aa5.4□□□□□ -1.54
HERPUD1-206ENST00000563343 TMED3Q9Y3Q3 217 aa5.4□□□□□ -1.54
HERPUD1-206ENST00000563343 LINC00588Q9Y4M8 146 aa5.4□□□□□ -1.54
HERPUD1-206ENST00000563343 ORC6Q9Y5N6 252 aa5.4□□□□□ -1.54
HERPUD1-206ENST00000563343 TEX50A0A1B0GTY4 177 aa5.39□□□□□ -1.55
HERPUD1-206ENST00000563343 LOC100130705A0A1B0GUX0 176 aa5.39□□□□□ -1.55
HERPUD1-206ENST00000563343 TMEM189A5PLL7 270 aa5.39□□□□□ -1.55
HERPUD1-206ENST00000563343 KRTAP29-1A8MX34 341 aaPredicted RBP5.39□□□□□ -1.55
HERPUD1-206ENST00000563343 I3L2K1 104 aa5.39□□□□□ -1.55
HERPUD1-206ENST00000563343 SLC17A2O00624 439 aa5.39□□□□□ -1.55
HERPUD1-206ENST00000563343 YIF1AO95070 293 aa5.39□□□□□ -1.55
HERPUD1-206ENST00000563343 SMR3BP02814 79 aaPredicted RBP5.39□□□□□ -1.55
HERPUD1-206ENST00000563343 MYL12AP19105 171 aa5.39□□□□□ -1.55
HERPUD1-206ENST00000563343 NFYAP23511 347 aaPredicted RBP5.39□□□□□ -1.55
HERPUD1-206ENST00000563343 FUSP35637 526 aaKnown RBP eCLIP5.39□□□□□ -1.55
HERPUD1-206ENST00000563343 XP32Q5T750 250 aa5.39□□□□□ -1.55
HERPUD1-206ENST00000563343 THOC7Q6I9Y2 204 aaKnown RBP5.39□□□□□ -1.55
HERPUD1-206ENST00000563343 TOMM20LQ6UXN7 152 aa5.39□□□□□ -1.55
HERPUD1-206ENST00000563343 OR56B1Q8NGI3 324 aa5.39□□□□□ -1.55
HERPUD1-206ENST00000563343 ZNF503Q96F45 646 aa5.39□□□□□ -1.55
HERPUD1-206ENST00000563343 C17orf77Q96MU5 243 aa5.39□□□□□ -1.55
HERPUD1-206ENST00000563343 RAB40CQ96S21 281 aa5.39□□□□□ -1.55
HERPUD1-206ENST00000563343 ATG101Q9BSB4 218 aa5.39□□□□□ -1.55
HERPUD1-206ENST00000563343 COMMD5Q9GZQ3 224 aa5.39□□□□□ -1.55
HERPUD1-206ENST00000563343 HRASLSQ9HDD0 168 aa5.39□□□□□ -1.55
HERPUD1-206ENST00000563343 NDUFA4L2Q9NRX3 87 aa5.39□□□□□ -1.55
HERPUD1-206ENST00000563343 RABAC1Q9UI14 185 aa5.39□□□□□ -1.55
HERPUD1-206ENST00000563343 TEX48A0A1B0GUV7 120 aa5.38□□□□□ -1.55
HERPUD1-206ENST00000563343 SMIM9A6NGZ8 99 aa5.38□□□□□ -1.55
HERPUD1-206ENST00000563343 CYB5BO43169 146 aa5.38□□□□□ -1.55
HERPUD1-206ENST00000563343 RBFOX2O43251 390 aaKnown RBP eCLIP5.38□□□□□ -1.55
HERPUD1-206ENST00000563343 SLC22A5O76082 557 aa5.38□□□□□ -1.55
HERPUD1-206ENST00000563343 TRAPPC2P0DI81 140 aa5.38□□□□□ -1.55
HERPUD1-206ENST00000563343 TRAPPC2BP0DI82 140 aa5.38□□□□□ -1.55
HERPUD1-206ENST00000563343 HTN3P15516 51 aa5.38□□□□□ -1.55
HERPUD1-206ENST00000563343 FGF9P31371 208 aaPredicted RBP5.38□□□□□ -1.55
HERPUD1-206ENST00000563343 EMP1P54849 157 aa5.38□□□□□ -1.55
HERPUD1-206ENST00000563343 CLDN12P56749 244 aa5.38□□□□□ -1.55
HERPUD1-206ENST00000563343 KRTAP10-1P60331 282 aa5.38□□□□□ -1.55
HERPUD1-206ENST00000563343 C2orf76Q3KRA6 126 aa5.38□□□□□ -1.55
HERPUD1-206ENST00000563343 SERTAD4-AS1Q5TG53 156 aa5.38□□□□□ -1.55
HERPUD1-206ENST00000563343 Q6ZRN7 208 aaPredicted RBP5.38□□□□□ -1.55
HERPUD1-206ENST00000563343 CBR4Q8N4T8 237 aa5.38□□□□□ -1.55
HERPUD1-206ENST00000563343 TMEM80Q96HE8 168 aa5.38□□□□□ -1.55
HERPUD1-206ENST00000563343 TXN2Q99757 166 aa5.38□□□□□ -1.55
HERPUD1-206ENST00000563343 GINS3Q9BRX5 216 aa5.38□□□□□ -1.55
HERPUD1-206ENST00000563343 C1QTNF4Q9BXJ3 329 aa5.38□□□□□ -1.55
HERPUD1-206ENST00000563343 DCSTAMPQ9H295 470 aa5.38□□□□□ -1.55
HERPUD1-206ENST00000563343 TAS2R8Q9NYW2 309 aa5.38□□□□□ -1.55
HERPUD1-206ENST00000563343 ELF5Q9UKW6 265 aaPredicted RBP5.38□□□□□ -1.55
HERPUD1-206ENST00000563343 LRP1Q07954 4544 aaKnown RBP5.38□□□□□ -1.55
HERPUD1-206ENST00000563343 TMEM272A0A1B0GTI8 110 aa5.37□□□□□ -1.55
HERPUD1-206ENST00000563343 IRGMA1A4Y4 181 aa5.37□□□□□ -1.55
HERPUD1-206ENST00000563343 EFCAB10A6NFE3 127 aa5.37□□□□□ -1.55
HERPUD1-206ENST00000563343 H3BMM0 161 aa5.37□□□□□ -1.55
HERPUD1-206ENST00000563343 RGS13O14921 159 aa5.37□□□□□ -1.55
HERPUD1-206ENST00000563343 EIF4EP06730 217 aaKnown RBP5.37□□□□□ -1.55
HERPUD1-206ENST00000563343 UCHL1P09936 223 aa5.37□□□□□ -1.55
HERPUD1-206ENST00000563343 GNB3P16520 340 aa5.37□□□□□ -1.55
HERPUD1-206ENST00000563343 MFAP4P55083 255 aa5.37□□□□□ -1.55
HERPUD1-206ENST00000563343 TAS2R31P59538 309 aa5.37□□□□□ -1.55
HERPUD1-206ENST00000563343 RPL11P62913 178 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms