RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 FGF13Q92913 245 aa1.65□□□□□ -2.15
SHCBP1-202ENST00000563219 CNBD2Q96M20 576 aa1.65□□□□□ -2.15
SHCBP1-202ENST00000563219 GINS3Q9BRX5 216 aa1.65□□□□□ -2.15
SHCBP1-202ENST00000563219 C1QTNF6Q9BXI9 259 aa1.65□□□□□ -2.15
SHCBP1-202ENST00000563219 ULBP3Q9BZM4 244 aa1.65□□□□□ -2.15
SHCBP1-202ENST00000563219 MAP1LC3BQ9GZQ8 125 aa1.65□□□□□ -2.15
SHCBP1-202ENST00000563219 TMEM126AQ9H061 195 aa1.65□□□□□ -2.15
SHCBP1-202ENST00000563219 DCSTAMPQ9H295 470 aa1.65□□□□□ -2.15
SHCBP1-202ENST00000563219 C16orf95Q9H693 158 aa1.65□□□□□ -2.15
SHCBP1-202ENST00000563219 CISHQ9NSE2 258 aa1.65□□□□□ -2.15
SHCBP1-202ENST00000563219 SS18L2Q9UHA2 77 aa1.65□□□□□ -2.15
SHCBP1-202ENST00000563219 PYCARDQ9ULZ3 195 aa1.65□□□□□ -2.15
SHCBP1-202ENST00000563219 ANAPC10Q9UM13 185 aa1.65□□□□□ -2.15
SHCBP1-202ENST00000563219 DOCK6Q96HP0 2047 aa1.65□□□□□ -2.15
SHCBP1-202ENST00000563219 ZSWIM8A7E2V4 1837 aa1.65□□□□□ -2.15
SHCBP1-202ENST00000563219 FAM135AQ9P2D6 1515 aa1.65□□□□□ -2.15
SHCBP1-202ENST00000563219 A2MP01023 1474 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 DHX57Q6P158 1386 aaKnown RBP1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 A0A087WUJ7 227 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 A0A096LPI6 279 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 BORCS7-ASMTA0A0B4J1R7 106 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 IGHV3-73A0A0B4J1V6 119 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 SMIM31A0A1B0GVY4 71 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 EXOC1LA0A1B0GW35 172 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 OR4C46A6NHA9 309 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 C17orf98A8MV24 154 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 F6UZH7 168 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 M0R143 59 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 DEGS1O15121 323 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 HMGB3O15347 200 aaKnown RBP1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 CDS2O95674 445 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 IFNA17P01571 189 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 C1QCP02747 245 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 IGKV4-1P06312 121 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 DBIP07108 87 aaKnown RBP1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 HTR1AP08908 422 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 CD7P09564 240 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 UBBP0CG47 229 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 CCL1P22362 96 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 ATP6V0CP27449 155 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 DDTP30046 118 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 S100A11P31949 105 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 FGF12P61328 243 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 PPP3R1P63098 170 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 PSG4Q00888 419 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 FOXF1Q12946 379 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 EBPQ15125 230 aaKnown RBP1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 HSD17B12Q53GQ0 312 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 SFXN4Q6P4A7 337 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 TOMM20LQ6UXN7 152 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 BRD3OSQ6XYD6 125 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 SPATA12Q7Z6I5 190 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 CROCCP2Q86T23 111 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 PDZD9Q8IXQ8 264 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 C8orf59Q8N0T1 100 aaPredicted RBP1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 UMODL1-AS1Q8N2C9 162 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 ZNF676Q8N7Q3 588 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 LY6G5BQ8NDX9 201 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 TSTD1Q8NFU3 115 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 OR4D11Q8NGI4 311 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 OR5H6Q8NGV6 325 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 CMTM2Q8TAZ6 248 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 RNASE6Q93091 150 aaKnown RBP1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 BORCS7Q96B45 105 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 TVP23CQ96ET8 276 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 KLF6Q99612 283 aaPredicted RBP1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 HSPB9Q9BQS6 159 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 TM2D3Q9BRN9 247 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 TMEM70Q9BUB7 260 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 EFCAB11Q9BUY7 163 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 PBDC1Q9BVG4 233 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 EFCAB1Q9HAE3 211 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 LRTM1Q9HBL6 345 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 HSPB8Q9UJY1 196 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 JPT1Q9UK76 154 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 MCTS1Q9ULC4 181 aaKnown RBP1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 PKIGQ9Y2B9 76 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 COQ4Q9Y3A0 265 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 HSPE1-MOB4S4R3N1 261 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 CCDC144AA2RUR9 1427 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 EEA1Q15075 1411 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 NCOA1Q15788 1441 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 VPS8Q8N3P4 1428 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 YTHDC2Q9H6S0 1430 aaKnown RBP1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 THSD7AQ9UPZ6 1657 aa1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 EIF4G3O43432 1585 aaKnown RBP1.64□□□□□ -2.15
SHCBP1-202ENST00000563219 SHROOM3Q8TF72 1996 aa1.63□□□□□ -2.15
SHCBP1-202ENST00000563219 COL18A1P39060 1754 aa1.63□□□□□ -2.15
SHCBP1-202ENST00000563219 ADAMTSL1Q8N6G6 1762 aa1.63□□□□□ -2.15
SHCBP1-202ENST00000563219 A0A1B0GV50 99 aa1.63□□□□□ -2.15
SHCBP1-202ENST00000563219 TMEM269A0A1B0GVZ9 245 aa1.63□□□□□ -2.15
SHCBP1-202ENST00000563219 A0A1W2PNM2 257 aa1.63□□□□□ -2.15
SHCBP1-202ENST00000563219 A0A1W2PRE2 83 aa1.63□□□□□ -2.15
SHCBP1-202ENST00000563219 FAM159BA6NKW6 160 aa1.63□□□□□ -2.15
SHCBP1-202ENST00000563219 E7EQL1 145 aa1.63□□□□□ -2.15
SHCBP1-202ENST00000563219 COX7A2LO14548 114 aa1.63□□□□□ -2.15
SHCBP1-202ENST00000563219 PSCAO43653 123 aa1.63□□□□□ -2.15
SHCBP1-202ENST00000563219 C1QBP02746 253 aa1.63□□□□□ -2.15
SHCBP1-202ENST00000563219 C8GP07360 202 aa1.63□□□□□ -2.15
SHCBP1-202ENST00000563219 P0C880 135 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms