RNA–Protein interactions for RNA: ENST00000563115.5

POLR2C-204, Transcript of RNA polymerase II subunit C, humanhuman

TSL 2

Gene POLR2C, Length 1,062 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2C-204ENST00000563115 PRNDQ9UKY0 176 aa13.18□□□□□ -0.3
POLR2C-204ENST00000563115 LOC102724200A0A096LPH7 203 aaPredicted RBP13.17□□□□□ -0.3
POLR2C-204ENST00000563115 C15orf61A6NNL5 157 aa13.17□□□□□ -0.3
POLR2C-204ENST00000563115 VBP1P61758 197 aa13.17□□□□□ -0.3
POLR2C-204ENST00000563115 SPSB3Q6PJ21 355 aa13.17□□□□□ -0.3
POLR2C-204ENST00000563115 TBC1D26Q86UD7 250 aa13.17□□□□□ -0.3
POLR2C-204ENST00000563115 ZNF414Q96IQ9 312 aa13.17□□□□□ -0.3
POLR2C-204ENST00000563115 CMTM3Q96MX0 182 aa13.17□□□□□ -0.3
POLR2C-204ENST00000563115 SPAG8Q99932 426 aaPredicted RBP13.17□□□□□ -0.3
POLR2C-204ENST00000563115 OVOL2Q9BRP0 275 aa13.17□□□□□ -0.3
POLR2C-204ENST00000563115 FAM212BQ9NTI7 297 aaPredicted RBP13.17□□□□□ -0.3
POLR2C-204ENST00000563115 IGHV3OR16-8A0A075B7F1 116 aa13.16□□□□□ -0.3
POLR2C-204ENST00000563115 NDUFA4O00483 81 aa13.16□□□□□ -0.3
POLR2C-204ENST00000563115 TSPAN4O14817 238 aa13.16□□□□□ -0.3
POLR2C-204ENST00000563115 IGKV1-39P01597 117 aa13.16□□□□□ -0.3
POLR2C-204ENST00000563115 IGKV1D-39P04432 117 aa13.16□□□□□ -0.3
POLR2C-204ENST00000563115 ELK1P19419 428 aa13.16□□□□□ -0.3
POLR2C-204ENST00000563115 TSPAN5P62079 268 aa13.16□□□□□ -0.3
POLR2C-204ENST00000563115 OR2C3Q8N628 320 aa13.16□□□□□ -0.3
POLR2C-204ENST00000563115 SEC22AQ96IW7 307 aa13.16□□□□□ -0.3
POLR2C-204ENST00000563115 TMEM56Q96MV1 263 aa13.16□□□□□ -0.3
POLR2C-204ENST00000563115 TSC22D3Q99576 134 aa13.16□□□□□ -0.3
POLR2C-204ENST00000563115 FKBP11Q9NYL4 201 aa13.16□□□□□ -0.3
POLR2C-204ENST00000563115 SMIM31A0A1B0GVY4 71 aa13.15□□□□□ -0.3
POLR2C-204ENST00000563115 HPGDSO60760 199 aa13.15□□□□□ -0.3
POLR2C-204ENST00000563115 RCVRNP35243 200 aa13.15□□□□□ -0.3
POLR2C-204ENST00000563115 UCP3P55916 312 aa13.15□□□□□ -0.3
POLR2C-204ENST00000563115 LPCAT3Q6P1A2 487 aa13.15□□□□□ -0.3
POLR2C-204ENST00000563115 UBAC2Q8NBM4 344 aa13.15□□□□□ -0.3
POLR2C-204ENST00000563115 OR1P1Q8NH06 330 aa13.15□□□□□ -0.3
POLR2C-204ENST00000563115 C20orf24Q9BUV8 137 aa13.15□□□□□ -0.3
POLR2C-204ENST00000563115 UBQLN2Q9UHD9 624 aa13.15□□□□□ -0.3
POLR2C-204ENST00000563115 ZNF207O43670 478 aaKnown RBP13.14□□□□□ -0.31
POLR2C-204ENST00000563115 CTSGP08311 255 aa13.14□□□□□ -0.31
POLR2C-204ENST00000563115 S100GP29377 79 aa13.14□□□□□ -0.31
POLR2C-204ENST00000563115 ODF3L2Q3SX64 289 aa13.14□□□□□ -0.31
POLR2C-204ENST00000563115 Q56UQ5 140 aa13.14□□□□□ -0.31
POLR2C-204ENST00000563115 SLC38A6Q8IZM9 456 aa13.14□□□□□ -0.31
POLR2C-204ENST00000563115 I3L2K1 104 aa13.13□□□□□ -0.31
POLR2C-204ENST00000563115 K7EMT4 169 aa13.13□□□□□ -0.31
POLR2C-204ENST00000563115 M0QYG6 137 aa13.13□□□□□ -0.31
POLR2C-204ENST00000563115 JTBO76095 146 aa13.13□□□□□ -0.31
POLR2C-204ENST00000563115 PRCDQ00LT1 54 aa13.13□□□□□ -0.31
POLR2C-204ENST00000563115 H2BFWTQ7Z2G1 175 aa13.13□□□□□ -0.31
POLR2C-204ENST00000563115 MRGPRFQ96AM1 343 aa13.13□□□□□ -0.31
POLR2C-204ENST00000563115 C15orf62A8K5M9 175 aa13.12□□□□□ -0.31
POLR2C-204ENST00000563115 LAMTOR1Q6IAA8 161 aa13.12□□□□□ -0.31
POLR2C-204ENST00000563115 ZNF114Q8NC26 417 aa13.12□□□□□ -0.31
POLR2C-204ENST00000563115 OR4A16Q8NH70 328 aa13.12□□□□□ -0.31
POLR2C-204ENST00000563115 MISP3Q96FF7 219 aa13.12□□□□□ -0.31
POLR2C-204ENST00000563115 FCGR2BP31994 310 aaPredicted RBP13.11□□□□□ -0.31
POLR2C-204ENST00000563115 RORCP51449 518 aa13.11□□□□□ -0.31
POLR2C-204ENST00000563115 RNASE12Q5GAN4 147 aaKnown RBP13.11□□□□□ -0.31
POLR2C-204ENST00000563115 NAA50Q9GZZ1 169 aaKnown RBP13.11□□□□□ -0.31
POLR2C-204ENST00000563115 SMPXQ9UHP9 88 aa13.11□□□□□ -0.31
POLR2C-204ENST00000563115 OR4C46A6NHA9 309 aa13.1□□□□□ -0.31
POLR2C-204ENST00000563115 NUPL2O15504 423 aaKnown RBP13.1□□□□□ -0.31
POLR2C-204ENST00000563115 MT-CO2P00403 227 aa13.1□□□□□ -0.31
POLR2C-204ENST00000563115 CTSDP07339 412 aaPredicted RBP13.1□□□□□ -0.31
POLR2C-204ENST00000563115 PI3P19957 117 aa13.1□□□□□ -0.31
POLR2C-204ENST00000563115 APOC4P55056 127 aa13.1□□□□□ -0.31
POLR2C-204ENST00000563115 MFAP4P55083 255 aa13.1□□□□□ -0.31
POLR2C-204ENST00000563115 RND3P61587 244 aa13.1□□□□□ -0.31
POLR2C-204ENST00000563115 HSPE1P61604 102 aaKnown RBP13.1□□□□□ -0.31
POLR2C-204ENST00000563115 RELQ04864 619 aaPredicted RBP13.1□□□□□ -0.31
POLR2C-204ENST00000563115 IZUMO4Q1ZYL8 232 aa13.1□□□□□ -0.31
POLR2C-204ENST00000563115 Q6ZWC4 215 aa13.1□□□□□ -0.31
POLR2C-204ENST00000563115 LHFPL1Q86WI0 220 aa13.1□□□□□ -0.31
POLR2C-204ENST00000563115 WFDC3Q8IUB2 231 aa13.1□□□□□ -0.31
POLR2C-204ENST00000563115 OR10C1Q96KK4 312 aa13.1□□□□□ -0.31
POLR2C-204ENST00000563115 RNF2Q99496 336 aa13.1□□□□□ -0.31
POLR2C-204ENST00000563115 KLK11Q9UBX7 282 aa13.1□□□□□ -0.31
POLR2C-204ENST00000563115 TP53TG1Q9Y2A0 90 aa13.1□□□□□ -0.31
POLR2C-204ENST00000563115 IGHV7-4-1A0A0J9YVY3 117 aa13.09□□□□□ -0.31
POLR2C-204ENST00000563115 FAM25AB3EWG3 89 aa13.09□□□□□ -0.31
POLR2C-204ENST00000563115 FAM25CB3EWG5 89 aa13.09□□□□□ -0.31
POLR2C-204ENST00000563115 FAM25GB3EWG6 89 aa13.09□□□□□ -0.31
POLR2C-204ENST00000563115 CHEK1O14757 476 aa13.09□□□□□ -0.31
POLR2C-204ENST00000563115 IGKV1-5P01602 117 aa13.09□□□□□ -0.31
POLR2C-204ENST00000563115 IGHV3-48P01763 117 aa13.09□□□□□ -0.31
POLR2C-204ENST00000563115 P0C879 139 aa13.09□□□□□ -0.31
POLR2C-204ENST00000563115 EWSR1Q01844 656 aaKnown RBP eCLIP13.09□□□□□ -0.31
POLR2C-204ENST00000563115 CTF1Q16619 201 aa13.09□□□□□ -0.31
POLR2C-204ENST00000563115 DEFB135Q30KP9 77 aa13.09□□□□□ -0.31
POLR2C-204ENST00000563115 OR52I2Q8NH67 350 aa13.09□□□□□ -0.31
POLR2C-204ENST00000563115 TXN2Q99757 166 aa13.09□□□□□ -0.31
POLR2C-204ENST00000563115 RHPN1-AS1Q9BWJ2 59 aa13.09□□□□□ -0.31
POLR2C-204ENST00000563115 NXF2Q9GZY0 626 aaKnown RBP13.09□□□□□ -0.31
POLR2C-204ENST00000563115 IGHV3-49A0A0A0MS15 119 aa13.08□□□□□ -0.32
POLR2C-204ENST00000563115 KIR2DL5BA0A0G2JN68 375 aa13.08□□□□□ -0.32
POLR2C-204ENST00000563115 KIR2DL5BA0A0G2JPC4 375 aa13.08□□□□□ -0.32
POLR2C-204ENST00000563115 UBE2CO00762 179 aa13.08□□□□□ -0.32
POLR2C-204ENST00000563115 GABARAPO95166 117 aa13.08□□□□□ -0.32
POLR2C-204ENST00000563115 CD3DP04234 171 aa13.08□□□□□ -0.32
POLR2C-204ENST00000563115 SMIM18P0DKX4 95 aa13.08□□□□□ -0.32
POLR2C-204ENST00000563115 PGAM2P15259 253 aa13.08□□□□□ -0.32
POLR2C-204ENST00000563115 PIGPP57054 158 aa13.08□□□□□ -0.32
POLR2C-204ENST00000563115 SPINK9Q5DT21 86 aa13.08□□□□□ -0.32
POLR2C-204ENST00000563115 RNASE10Q5GAN6 216 aaKnown RBP13.08□□□□□ -0.32
POLR2C-204ENST00000563115 MZT2AQ6P582 158 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms