RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 LRRN1Q6UXK5 716 aa0.4□□□□□ -2.35
CHD9-207ENST00000562806 DEFB125Q8N687 156 aa0.4□□□□□ -2.35
CHD9-207ENST00000562806 CNBD2Q96M20 576 aa0.4□□□□□ -2.35
CHD9-207ENST00000562806 HDHD2Q9H0R4 259 aa0.4□□□□□ -2.35
CHD9-207ENST00000562806 MIXL1Q9H2W2 232 aa0.4□□□□□ -2.35
CHD9-207ENST00000562806 EFCAB1Q9HAE3 211 aa0.4□□□□□ -2.35
CHD9-207ENST00000562806 GPR98Q8WXG9 6306 aa0.4□□□□□ -2.35
CHD9-207ENST00000562806 LINC00854A0A1B0GVQ3 168 aa0.39□□□□□ -2.35
CHD9-207ENST00000562806 M0QZ92 97 aa0.39□□□□□ -2.35
CHD9-207ENST00000562806 HTR1AP08908 422 aa0.39□□□□□ -2.35
CHD9-207ENST00000562806 COX5BP10606 129 aa0.39□□□□□ -2.35
CHD9-207ENST00000562806 MAP2K4P45985 399 aa0.39□□□□□ -2.35
CHD9-207ENST00000562806 COQ5Q5HYK3 327 aa0.39□□□□□ -2.35
CHD9-207ENST00000562806 SPANXN3Q5MJ09 141 aa0.39□□□□□ -2.35
CHD9-207ENST00000562806 FAM151BQ6UXP7 276 aa0.39□□□□□ -2.35
CHD9-207ENST00000562806 OR5B17Q8NGF7 314 aa0.39□□□□□ -2.35
CHD9-207ENST00000562806 RAB8BQ92930 207 aa0.39□□□□□ -2.35
CHD9-207ENST00000562806 SCGB3A1Q96QR1 104 aa0.39□□□□□ -2.35
CHD9-207ENST00000562806 DRC3Q9H069 523 aa0.39□□□□□ -2.35
CHD9-207ENST00000562806 FGFR1OP2Q9NVK5 253 aa0.39□□□□□ -2.35
CHD9-207ENST00000562806 USE1Q9NZ43 259 aa0.39□□□□□ -2.35
CHD9-207ENST00000562806 STRCQ7RTU9 1775 aa0.39□□□□□ -2.35
CHD9-207ENST00000562806 RIC1Q4ADV7 1423 aa0.38□□□□□ -2.35
CHD9-207ENST00000562806 TRBV20OR9-2A0A075B6H5 130 aa0.38□□□□□ -2.35
CHD9-207ENST00000562806 A0A0D9SG52 128 aa0.38□□□□□ -2.35
CHD9-207ENST00000562806 LRRN3E7EW58 273 aa0.38□□□□□ -2.35
CHD9-207ENST00000562806 H0Y980 276 aa0.38□□□□□ -2.35
CHD9-207ENST00000562806 C19orf84I3L1E1 186 aa0.38□□□□□ -2.35
CHD9-207ENST00000562806 M0R2N4 97 aa0.38□□□□□ -2.35
CHD9-207ENST00000562806 DEXIO95424 95 aa0.38□□□□□ -2.35
CHD9-207ENST00000562806 CLPSP04118 112 aa0.38□□□□□ -2.35
CHD9-207ENST00000562806 COX6A1P12074 109 aa0.38□□□□□ -2.35
CHD9-207ENST00000562806 MAGEA2P43356 314 aa0.38□□□□□ -2.35
CHD9-207ENST00000562806 MAP3K7CLP57077 242 aa0.38□□□□□ -2.35
CHD9-207ENST00000562806 RAB4BP61018 213 aa0.38□□□□□ -2.35
CHD9-207ENST00000562806 NAA20P61599 178 aa0.38□□□□□ -2.35
CHD9-207ENST00000562806 GRK1Q15835 563 aa0.38□□□□□ -2.35
CHD9-207ENST00000562806 RPL22L1Q6P5R6 122 aaKnown RBP0.38□□□□□ -2.35
CHD9-207ENST00000562806 LCN15Q6UWW0 184 aa0.38□□□□□ -2.35
CHD9-207ENST00000562806 IQCF2Q8IXL9 164 aa0.38□□□□□ -2.35
CHD9-207ENST00000562806 TMEM156Q8N614 296 aa0.38□□□□□ -2.35
CHD9-207ENST00000562806 Q8N814 137 aa0.38□□□□□ -2.35
CHD9-207ENST00000562806 ZNF418Q8TF45 676 aaPredicted RBP0.38□□□□□ -2.35
CHD9-207ENST00000562806 PIK3R4Q99570 1358 aa0.37□□□□□ -2.35
CHD9-207ENST00000562806 A0A0J9YY10 115 aa0.37□□□□□ -2.35
CHD9-207ENST00000562806 A0A1B0GX78 115 aa0.37□□□□□ -2.35
CHD9-207ENST00000562806 EVPLLA8MZ36 301 aa0.37□□□□□ -2.35
CHD9-207ENST00000562806 ACOX3O15254 700 aa0.37□□□□□ -2.35
CHD9-207ENST00000562806 OR2T1O43869 369 aa0.37□□□□□ -2.35
CHD9-207ENST00000562806 FADS1O60427 444 aa0.37□□□□□ -2.35
CHD9-207ENST00000562806 OR1I1O60431 355 aa0.37□□□□□ -2.35
CHD9-207ENST00000562806 ASAH2BP0C7U1 165 aa0.37□□□□□ -2.35
CHD9-207ENST00000562806 HIST1H2BOP23527 126 aa0.37□□□□□ -2.35
CHD9-207ENST00000562806 RPS12P25398 132 aaKnown RBP0.37□□□□□ -2.35
CHD9-207ENST00000562806 CASQ1P31415 396 aa0.37□□□□□ -2.35
CHD9-207ENST00000562806 HIST1H2BBP33778 126 aa0.37□□□□□ -2.35
CHD9-207ENST00000562806 HIST1H2BDP58876 126 aa0.37□□□□□ -2.35
CHD9-207ENST00000562806 RAB5BP61020 215 aa0.37□□□□□ -2.35
CHD9-207ENST00000562806 HIST1H2BCP62807 126 aa0.37□□□□□ -2.35
CHD9-207ENST00000562806 PDE6HQ13956 83 aa0.37□□□□□ -2.35
CHD9-207ENST00000562806 GUK1Q16774 197 aa0.37□□□□□ -2.35
CHD9-207ENST00000562806 HIST2H2BEQ16778 126 aa0.37□□□□□ -2.35
CHD9-207ENST00000562806 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.37□□□□□ -2.35
CHD9-207ENST00000562806 GDF5OSQ5U4N7 250 aa0.37□□□□□ -2.35
CHD9-207ENST00000562806 AADACL3Q5VUY0 350 aa0.37□□□□□ -2.35
CHD9-207ENST00000562806 DPPA3Q6W0C5 159 aa0.37□□□□□ -2.35
CHD9-207ENST00000562806 C10orf67Q8IYJ2 551 aa0.37□□□□□ -2.35
CHD9-207ENST00000562806 HIST1H2BHQ93079 126 aa0.37□□□□□ -2.35
CHD9-207ENST00000562806 OPTNQ96CV9 577 aa0.37□□□□□ -2.35
CHD9-207ENST00000562806 OBSCN-AS1Q96MR7 158 aa0.37□□□□□ -2.35
CHD9-207ENST00000562806 HIST1H2BNQ99877 126 aa0.37□□□□□ -2.35
CHD9-207ENST00000562806 HIST1H2BMQ99879 126 aa0.37□□□□□ -2.35
CHD9-207ENST00000562806 SLC50A1Q9BRV3 221 aa0.37□□□□□ -2.35
CHD9-207ENST00000562806 DERL1Q9BUN8 251 aa0.37□□□□□ -2.35
CHD9-207ENST00000562806 ZFP30Q9Y2G7 519 aa0.37□□□□□ -2.35
CHD9-207ENST00000562806 C9orf84Q5VXU9 1444 aa0.37□□□□□ -2.35
CHD9-207ENST00000562806 ZNF469Q96JG9 3925 aaPredicted RBP0.36□□□□□ -2.35
CHD9-207ENST00000562806 INMT-MINDY4F8WBC2 141 aa0.36□□□□□ -2.35
CHD9-207ENST00000562806 KCNK1O00180 336 aa0.36□□□□□ -2.35
CHD9-207ENST00000562806 DCTN3O75935 186 aa0.36□□□□□ -2.35
CHD9-207ENST00000562806 TCL1BO95988 128 aa0.36□□□□□ -2.35
CHD9-207ENST00000562806 ISG15P05161 165 aa0.36□□□□□ -2.35
CHD9-207ENST00000562806 TPM3P06753 285 aa0.36□□□□□ -2.35
CHD9-207ENST00000562806 OR5G3P0C626 314 aa0.36□□□□□ -2.35
CHD9-207ENST00000562806 BAALC-AS2P0C853 105 aa0.36□□□□□ -2.35
CHD9-207ENST00000562806 AP2S1P53680 142 aaPredicted RBP0.36□□□□□ -2.35
CHD9-207ENST00000562806 SFXN4Q6P4A7 337 aa0.36□□□□□ -2.35
CHD9-207ENST00000562806 CD200R1LQ6Q8B3 271 aa0.36□□□□□ -2.35
CHD9-207ENST00000562806 Q6ZS49 121 aa0.36□□□□□ -2.35
CHD9-207ENST00000562806 KRTAP19-3Q7Z4W3 81 aa0.36□□□□□ -2.35
CHD9-207ENST00000562806 LRRC25Q8N386 305 aaPredicted RBP0.36□□□□□ -2.35
CHD9-207ENST00000562806 LINC00311Q8N616 119 aa0.36□□□□□ -2.35
CHD9-207ENST00000562806 OR13C4Q8NGS5 318 aa0.36□□□□□ -2.35
CHD9-207ENST00000562806 OR2T4Q8NH00 348 aa0.36□□□□□ -2.35
CHD9-207ENST00000562806 PFN4Q8NHR9 129 aa0.36□□□□□ -2.35
CHD9-207ENST00000562806 MRPL30Q8TCC3 161 aaKnown RBP0.36□□□□□ -2.35
CHD9-207ENST00000562806 C4orf3Q8WVX3 66 aa0.36□□□□□ -2.35
CHD9-207ENST00000562806 GINS4Q9BRT9 223 aa0.36□□□□□ -2.35
CHD9-207ENST00000562806 WDR61Q9GZS3 305 aaKnown RBP0.36□□□□□ -2.35
CHD9-207ENST00000562806 OR51I1Q9H343 314 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms