RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 MARVELD1Q9BSK0 173 aa12.72□□□□□ -0.37
USB1-206ENST00000562534 GPN1Q9HCN4 374 aaPredicted RBP12.72□□□□□ -0.37
USB1-206ENST00000562534 ENY2Q9NPA8 101 aa12.72□□□□□ -0.37
USB1-206ENST00000562534 INMT-MINDY4F8WBC2 141 aa12.71□□□□□ -0.37
USB1-206ENST00000562534 REG1AP05451 166 aa12.71□□□□□ -0.37
USB1-206ENST00000562534 RUNX1Q01196 453 aa12.71□□□□□ -0.37
USB1-206ENST00000562534 ATP5G2Q06055 141 aa12.71□□□□□ -0.37
USB1-206ENST00000562534 PRR31Q5SQ13 230 aa12.71□□□□□ -0.37
USB1-206ENST00000562534 OR2C3Q8N628 320 aa12.71□□□□□ -0.37
USB1-206ENST00000562534 PRAF2O60831 178 aa12.7□□□□□ -0.38
USB1-206ENST00000562534 PRH1P02810 166 aa12.7□□□□□ -0.38
USB1-206ENST00000562534 SNCAP37840 140 aa12.7□□□□□ -0.38
USB1-206ENST00000562534 MYCNOSP40205 109 aa12.7□□□□□ -0.38
USB1-206ENST00000562534 SUB1P53999 127 aaKnown RBP eCLIP12.7□□□□□ -0.38
USB1-206ENST00000562534 RHOGP84095 191 aa12.7□□□□□ -0.38
USB1-206ENST00000562534 DCTN2Q13561 401 aaKnown RBP12.7□□□□□ -0.38
USB1-206ENST00000562534 GGNBP1Q5YKI7 109 aa12.7□□□□□ -0.38
USB1-206ENST00000562534 SLC25A24Q6NUK1 477 aa12.7□□□□□ -0.38
USB1-206ENST00000562534 C8orf86Q6ZUL3 223 aa12.7□□□□□ -0.38
USB1-206ENST00000562534 OR52B4Q8NGK2 314 aa12.7□□□□□ -0.38
USB1-206ENST00000562534 OR1S1Q8NH92 325 aa12.7□□□□□ -0.38
USB1-206ENST00000562534 FANCD2OSQ96PS1 177 aa12.7□□□□□ -0.38
USB1-206ENST00000562534 FBXL7Q9UJT9 491 aa12.7□□□□□ -0.38
USB1-206ENST00000562534 F11RQ9Y624 299 aaKnown RBP12.7□□□□□ -0.38
USB1-206ENST00000562534 I3L521 148 aa12.69□□□□□ -0.38
USB1-206ENST00000562534 PITX3O75364 302 aa12.69□□□□□ -0.38
USB1-206ENST00000562534 OR2J3O76001 311 aa12.69□□□□□ -0.38
USB1-206ENST00000562534 PTTG1O95997 202 aa12.69□□□□□ -0.38
USB1-206ENST00000562534 FAM209BQ5JX69 171 aa12.69□□□□□ -0.38
USB1-206ENST00000562534 C18orf65Q6ZTR6 163 aa12.69□□□□□ -0.38
USB1-206ENST00000562534 C12orf45Q8N5I9 185 aaPredicted RBP12.69□□□□□ -0.38
USB1-206ENST00000562534 OR1P1Q8NH06 330 aa12.69□□□□□ -0.38
USB1-206ENST00000562534 SEC22CQ9BRL7 303 aa12.69□□□□□ -0.38
USB1-206ENST00000562534 HIPK2Q9H2X6 1198 aa12.69□□□□□ -0.38
USB1-206ENST00000562534 GNB4Q9HAV0 340 aa12.69□□□□□ -0.38
USB1-206ENST00000562534 IGLV11-55A0A075B6I3 123 aa12.68□□□□□ -0.38
USB1-206ENST00000562534 CEBPZOSA8MTT3 80 aa12.68□□□□□ -0.38
USB1-206ENST00000562534 SNRPGP15A8MWD9 76 aa12.68□□□□□ -0.38
USB1-206ENST00000562534 FAM90A26D6RGX4 464 aa12.68□□□□□ -0.38
USB1-206ENST00000562534 CCL24O00175 119 aa12.68□□□□□ -0.38
USB1-206ENST00000562534 ADAP1O75689 374 aa12.68□□□□□ -0.38
USB1-206ENST00000562534 PF4P02776 101 aa12.68□□□□□ -0.38
USB1-206ENST00000562534 LGALS1P09382 135 aaKnown RBP12.68□□□□□ -0.38
USB1-206ENST00000562534 HOXA1P49639 335 aaPredicted RBP12.68□□□□□ -0.38
USB1-206ENST00000562534 TNFRSF9Q07011 255 aa12.68□□□□□ -0.38
USB1-206ENST00000562534 C15orf32Q32M92 178 aa12.68□□□□□ -0.38
USB1-206ENST00000562534 ZNF343Q6P1L6 599 aa12.68□□□□□ -0.38
USB1-206ENST00000562534 UXS1Q8NBZ7 420 aa12.68□□□□□ -0.38
USB1-206ENST00000562534 ZNF114Q8NC26 417 aa12.68□□□□□ -0.38
USB1-206ENST00000562534 OR1N2Q8NGR9 330 aa12.68□□□□□ -0.38
USB1-206ENST00000562534 DPF1Q92782 380 aa12.68□□□□□ -0.38
USB1-206ENST00000562534 CXorf58Q96LI9 332 aa12.68□□□□□ -0.38
USB1-206ENST00000562534 OR5B12Q96R08 314 aa12.68□□□□□ -0.38
USB1-206ENST00000562534 HEYLQ9NQ87 328 aaPredicted RBP12.68□□□□□ -0.38
USB1-206ENST00000562534 HSPB7Q9UBY9 170 aa12.68□□□□□ -0.38
USB1-206ENST00000562534 MED6O75586 246 aa12.67□□□□□ -0.38
USB1-206ENST00000562534 NDUFB8O95169 186 aa12.67□□□□□ -0.38
USB1-206ENST00000562534 TSPAN15O95858 294 aa12.67□□□□□ -0.38
USB1-206ENST00000562534 IGHV3-11P01762 117 aa12.67□□□□□ -0.38
USB1-206ENST00000562534 HSPB1P04792 205 aaKnown RBP12.67□□□□□ -0.38
USB1-206ENST00000562534 SPINK9Q5DT21 86 aa12.67□□□□□ -0.38
USB1-206ENST00000562534 OR11H1Q8NG94 326 aa12.67□□□□□ -0.38
USB1-206ENST00000562534 RAX2Q96IS3 184 aa12.67□□□□□ -0.38
USB1-206ENST00000562534 P2RX4Q99571 388 aa12.67□□□□□ -0.38
USB1-206ENST00000562534 RANGRFQ9HD47 186 aaPredicted RBP12.67□□□□□ -0.38
USB1-206ENST00000562534 TRBV7-1A0A0A6YYK4 115 aa12.66□□□□□ -0.38
USB1-206ENST00000562534 HTR2BP41595 481 aa12.66□□□□□ -0.38
USB1-206ENST00000562534 ZNF616Q08AN1 781 aa12.66□□□□□ -0.38
USB1-206ENST00000562534 TREML4Q6UXN2 200 aa12.66□□□□□ -0.38
USB1-206ENST00000562534 C19orf35Q6ZS72 473 aa12.66□□□□□ -0.38
USB1-206ENST00000562534 NOXA1Q86UR1 476 aa12.66□□□□□ -0.38
USB1-206ENST00000562534 VN1R17PQ8TDU5 208 aa12.66□□□□□ -0.38
USB1-206ENST00000562534 EEF1AKMT3Q96AZ1 226 aa12.66□□□□□ -0.38
USB1-206ENST00000562534 PEF1Q9UBV8 284 aaKnown RBP12.66□□□□□ -0.38
USB1-206ENST00000562534 LY86O95711 162 aa12.65□□□□□ -0.38
USB1-206ENST00000562534 ATP5IP56385 69 aaPredicted RBP12.65□□□□□ -0.38
USB1-206ENST00000562534 ID3Q02535 119 aa12.65□□□□□ -0.38
USB1-206ENST00000562534 WFDC9Q8NEX5 89 aa12.65□□□□□ -0.38
USB1-206ENST00000562534 RBKSQ9H477 322 aa12.65□□□□□ -0.38
USB1-206ENST00000562534 DMRT1Q9Y5R6 373 aa12.65□□□□□ -0.38
USB1-206ENST00000562534 U3KQ87 197 aa12.65□□□□□ -0.38
USB1-206ENST00000562534 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.64□□□□□ -0.39
USB1-206ENST00000562534 MPTX1A8MV57 137 aa12.64□□□□□ -0.39
USB1-206ENST00000562534 LINC01619G3V211 115 aa12.64□□□□□ -0.39
USB1-206ENST00000562534 CORTO00230 105 aa12.64□□□□□ -0.39
USB1-206ENST00000562534 NXPH3O95157 252 aa12.64□□□□□ -0.39
USB1-206ENST00000562534 OR8U8P0C7N1 319 aa12.64□□□□□ -0.39
USB1-206ENST00000562534 MFAP2P55001 183 aa12.64□□□□□ -0.39
USB1-206ENST00000562534 RGS21Q2M5E4 152 aa12.64□□□□□ -0.39
USB1-206ENST00000562534 IAH1Q2TAA2 248 aaPredicted RBP12.64□□□□□ -0.39
USB1-206ENST00000562534 DEFB136Q30KP8 78 aa12.64□□□□□ -0.39
USB1-206ENST00000562534 DTD1Q8TEA8 209 aa12.64□□□□□ -0.39
USB1-206ENST00000562534 ANKRD34BA5PLL1 514 aa12.63□□□□□ -0.39
USB1-206ENST00000562534 C5orf51A6NDU8 294 aa12.63□□□□□ -0.39
USB1-206ENST00000562534 SYNGR2O43760 224 aa12.63□□□□□ -0.39
USB1-206ENST00000562534 RNASE2P10153 161 aaKnown RBP12.63□□□□□ -0.39
USB1-206ENST00000562534 SPNP16150 400 aa12.63□□□□□ -0.39
USB1-206ENST00000562534 ZP3P21754 424 aa12.63□□□□□ -0.39
USB1-206ENST00000562534 NKX2-1P43699 371 aaPredicted RBP12.63□□□□□ -0.39
USB1-206ENST00000562534 DEFA5Q01523 94 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms