RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 CIARTQ8N365 385 aaPredicted RBP9.45□□□□□ -0.9
RPAP1-204ENST00000562303 LRTM2Q8N967 370 aa9.45□□□□□ -0.9
RPAP1-204ENST00000562303 LYNX1G3V0Z9 82 aa9.45□□□□□ -0.9
RPAP1-204ENST00000562303 NDUFA3O95167 84 aa9.45□□□□□ -0.9
RPAP1-204ENST00000562303 LYNX1P0DP58 116 aa9.45□□□□□ -0.9
RPAP1-204ENST00000562303 SPACA3Q8IXA5 215 aa9.45□□□□□ -0.9
RPAP1-204ENST00000562303 C1QTNF5Q9BXJ0 243 aa9.45□□□□□ -0.9
RPAP1-204ENST00000562303 RPP21Q9H633 154 aaKnown RBP9.45□□□□□ -0.9
RPAP1-204ENST00000562303 NUP214P35658 2090 aaPredicted RBP9.45□□□□□ -0.9
RPAP1-204ENST00000562303 FAM209BQ5JX69 171 aa9.45□□□□□ -0.9
RPAP1-204ENST00000562303 QSER1Q2KHR3 1735 aa9.45□□□□□ -0.9
RPAP1-204ENST00000562303 TMEM50AO95807 157 aa9.44□□□□□ -0.9
RPAP1-204ENST00000562303 ZNF688P0C7X2 276 aa9.44□□□□□ -0.9
RPAP1-204ENST00000562303 OR9G4Q8NGQ1 327 aa9.44□□□□□ -0.9
RPAP1-204ENST00000562303 TRAV40A0A0B4J280 105 aa9.44□□□□□ -0.9
RPAP1-204ENST00000562303 GHRHP01286 108 aa9.44□□□□□ -0.9
RPAP1-204ENST00000562303 GATA2P23769 480 aaPredicted RBP9.44□□□□□ -0.9
RPAP1-204ENST00000562303 RHOGP84095 191 aa9.44□□□□□ -0.9
RPAP1-204ENST00000562303 SLC17A3O00476 420 aa9.44□□□□□ -0.9
RPAP1-204ENST00000562303 MIR17HGQ75NE6 70 aa9.44□□□□□ -0.9
RPAP1-204ENST00000562303 ST20Q9HBF5 79 aa9.44□□□□□ -0.9
RPAP1-204ENST00000562303 MCM3APO60318 1980 aa9.44□□□□□ -0.9
RPAP1-204ENST00000562303 UNC13CQ8NB66 2214 aa9.44□□□□□ -0.9
RPAP1-204ENST00000562303 SCO2A0A1W2PP80 73 aa9.44□□□□□ -0.9
RPAP1-204ENST00000562303 SAP30O75446 220 aa9.44□□□□□ -0.9
RPAP1-204ENST00000562303 H2BFSP57053 126 aa9.44□□□□□ -0.9
RPAP1-204ENST00000562303 CACNG8Q8WXS5 425 aa9.44□□□□□ -0.9
RPAP1-204ENST00000562303 TMEM133Q9H2Q1 129 aa9.44□□□□□ -0.9
RPAP1-204ENST00000562303 VCX2Q9H322 139 aa9.44□□□□□ -0.9
RPAP1-204ENST00000562303 ARAP2Q8WZ64 1704 aa9.44□□□□□ -0.9
RPAP1-204ENST00000562303 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.43□□□□□ -0.9
RPAP1-204ENST00000562303 WNT2P09544 360 aa9.43□□□□□ -0.9
RPAP1-204ENST00000562303 SSC4DQ8WTU2 575 aa9.43□□□□□ -0.9
RPAP1-204ENST00000562303 NEUROG1Q92886 237 aa9.43□□□□□ -0.9
RPAP1-204ENST00000562303 RCC1LQ96I51 464 aaKnown RBP9.43□□□□□ -0.9
RPAP1-204ENST00000562303 SLC50A1Q9BRV3 221 aa9.43□□□□□ -0.9
RPAP1-204ENST00000562303 SAA2-SAA4A0A096LPE2 208 aa9.43□□□□□ -0.9
RPAP1-204ENST00000562303 IGKV1D-43A0A0B4J1Z2 117 aa9.43□□□□□ -0.9
RPAP1-204ENST00000562303 A0A0G2JK05 382 aa9.43□□□□□ -0.9
RPAP1-204ENST00000562303 LDLRAD4O15165 306 aa9.43□□□□□ -0.9
RPAP1-204ENST00000562303 SAA2P0DJI9 122 aaPredicted RBP9.43□□□□□ -0.9
RPAP1-204ENST00000562303 IFI27P40305 119 aaPredicted RBP9.43□□□□□ -0.9
RPAP1-204ENST00000562303 CD200R1LQ6Q8B3 271 aa9.43□□□□□ -0.9
RPAP1-204ENST00000562303 ZNF585BQ52M93 769 aa9.43□□□□□ -0.9
RPAP1-204ENST00000562303 FBLN7Q53RD9 439 aa9.43□□□□□ -0.9
RPAP1-204ENST00000562303 ZCCHC24Q8N2G6 241 aaKnown RBP9.43□□□□□ -0.9
RPAP1-204ENST00000562303 IL36BQ9NZH7 164 aa9.43□□□□□ -0.9
RPAP1-204ENST00000562303 PRR32B1ATL7 298 aa9.43□□□□□ -0.9
RPAP1-204ENST00000562303 E9PLN8 166 aa9.43□□□□□ -0.9
RPAP1-204ENST00000562303 VENTXO95231 258 aa9.43□□□□□ -0.9
RPAP1-204ENST00000562303 APOMO95445 188 aa9.43□□□□□ -0.9
RPAP1-204ENST00000562303 IMMP1LQ96LU5 166 aa9.43□□□□□ -0.9
RPAP1-204ENST00000562303 VKORC1Q9BQB6 163 aa9.43□□□□□ -0.9
RPAP1-204ENST00000562303 TM2D1Q9BX74 207 aa9.43□□□□□ -0.9
RPAP1-204ENST00000562303 DSCR9P59020 149 aa9.43□□□□□ -0.9
RPAP1-204ENST00000562303 CHCHD5Q9BSY4 110 aa9.43□□□□□ -0.9
RPAP1-204ENST00000562303 SNAI2O43623 268 aa9.42□□□□□ -0.9
RPAP1-204ENST00000562303 UMODP07911 640 aa9.42□□□□□ -0.9
RPAP1-204ENST00000562303 STAG3L3P0CL85 134 aa9.42□□□□□ -0.9
RPAP1-204ENST00000562303 Q6AWC8 147 aa9.42□□□□□ -0.9
RPAP1-204ENST00000562303 OTORQ9NRC9 128 aa9.42□□□□□ -0.9
RPAP1-204ENST00000562303 A0A1B0GW15 77 aa9.42□□□□□ -0.9
RPAP1-204ENST00000562303 DPRXA6NFQ7 191 aa9.42□□□□□ -0.9
RPAP1-204ENST00000562303 FABP5P3A8MUU1 101 aa9.42□□□□□ -0.9
RPAP1-204ENST00000562303 CD8AP01732 235 aa9.42□□□□□ -0.9
RPAP1-204ENST00000562303 SRD5A1P18405 259 aa9.42□□□□□ -0.9
RPAP1-204ENST00000562303 WFDC12Q8WWY7 111 aa9.42□□□□□ -0.9
RPAP1-204ENST00000562303 ORMDL3Q8N138 153 aa9.42□□□□□ -0.9
RPAP1-204ENST00000562303 ASCL2Q99929 193 aa9.42□□□□□ -0.9
RPAP1-204ENST00000562303 MRPS18CQ9Y3D5 142 aaKnown RBP9.42□□□□□ -0.9
RPAP1-204ENST00000562303 UPK2O00526 184 aa9.42□□□□□ -0.9
RPAP1-204ENST00000562303 LHX2P50458 406 aa9.42□□□□□ -0.9
RPAP1-204ENST00000562303 IFITM3Q01628 133 aa9.42□□□□□ -0.9
RPAP1-204ENST00000562303 TMEM95Q3KNT9 176 aa9.42□□□□□ -0.9
RPAP1-204ENST00000562303 PVRIGQ6DKI7 326 aa9.42□□□□□ -0.9
RPAP1-204ENST00000562303 SLC25A28Q96A46 364 aa9.42□□□□□ -0.9
RPAP1-204ENST00000562303 ZNF837Q96EG3 531 aaPredicted RBP9.42□□□□□ -0.9
RPAP1-204ENST00000562303 SDHCQ99643 169 aaPredicted RBP9.42□□□□□ -0.9
RPAP1-204ENST00000562303 TRGV11A0A075B6L2 103 aa9.41□□□□□ -0.9
RPAP1-204ENST00000562303 GFI1BQ5VTD9 330 aa9.41□□□□□ -0.9
RPAP1-204ENST00000562303 PHLDA1Q8WV24 401 aaPredicted RBP9.41□□□□□ -0.9
RPAP1-204ENST00000562303 PLXNB2O15031 1838 aa9.41□□□□□ -0.9
RPAP1-204ENST00000562303 ERVK11-1P61568 191 aa9.41□□□□□ -0.9
RPAP1-204ENST00000562303 ZNF600Q6ZNG1 722 aa9.41□□□□□ -0.9
RPAP1-204ENST00000562303 TRIP12Q14669 1992 aaPredicted RBP9.41□□□□□ -0.9
RPAP1-204ENST00000562303 TRAV21A0A0B4J279 112 aa9.41□□□□□ -0.9
RPAP1-204ENST00000562303 ZNF98A6NK75 572 aa9.41□□□□□ -0.9
RPAP1-204ENST00000562303 MRPL14Q6P1L8 145 aaKnown RBP9.41□□□□□ -0.9
RPAP1-204ENST00000562303 PLPPR1Q8TBJ4 325 aa9.41□□□□□ -0.9
RPAP1-204ENST00000562303 RNF125Q96EQ8 232 aa9.41□□□□□ -0.9
RPAP1-204ENST00000562303 LINC00527Q9UJ94 153 aa9.41□□□□□ -0.9
RPAP1-204ENST00000562303 LTBP4Q8N2S1 1624 aa9.41□□□□□ -0.9
RPAP1-204ENST00000562303 CD33P20138 364 aa9.41□□□□□ -0.9
RPAP1-204ENST00000562303 ATP5G3P48201 142 aa9.41□□□□□ -0.9
RPAP1-204ENST00000562303 SVILO95425 2214 aa9.4□□□□□ -0.9
RPAP1-204ENST00000562303 TRAV12-3A0A0B4J271 114 aa9.4□□□□□ -0.9
RPAP1-204ENST00000562303 GNG5P63218 68 aa9.4□□□□□ -0.9
RPAP1-204ENST00000562303 ADARB2-AS1A8MUL3 147 aa9.4□□□□□ -0.9
RPAP1-204ENST00000562303 UCP1P25874 307 aa9.4□□□□□ -0.9
RPAP1-204ENST00000562303 PSMG4Q5JS54 123 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms