RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 OCMP0CE72 109 aaPredicted RBP3.8□□□□□ -1.8
UBR1-203ENST00000562173 UBCP0CG48 685 aaKnown RBP3.8□□□□□ -1.8
UBR1-203ENST00000562173 INAFM2P0DMQ5 153 aa3.8□□□□□ -1.8
UBR1-203ENST00000562173 INSL4Q14641 139 aa3.8□□□□□ -1.8
UBR1-203ENST00000562173 TNXAQ16473 311 aa3.8□□□□□ -1.8
UBR1-203ENST00000562173 C12orf74Q32Q52 190 aa3.8□□□□□ -1.8
UBR1-203ENST00000562173 NXNL2Q5VZ03 156 aa3.8□□□□□ -1.8
UBR1-203ENST00000562173 ZNF57Q68EA5 555 aaPredicted RBP3.8□□□□□ -1.8
UBR1-203ENST00000562173 ZNF562Q6V9R5 426 aa3.8□□□□□ -1.8
UBR1-203ENST00000562173 CEACAM19Q7Z692 300 aa3.8□□□□□ -1.8
UBR1-203ENST00000562173 VKORC1L1Q8N0U8 176 aa3.8□□□□□ -1.8
UBR1-203ENST00000562173 Q8NAQ8 132 aa3.8□□□□□ -1.8
UBR1-203ENST00000562173 PXT1Q8NFP0 134 aa3.8□□□□□ -1.8
UBR1-203ENST00000562173 CD300LFQ8TDQ1 290 aa3.8□□□□□ -1.8
UBR1-203ENST00000562173 TSEN15Q8WW01 171 aaKnown RBP3.8□□□□□ -1.8
UBR1-203ENST00000562173 AGMATQ9BSE5 352 aa3.8□□□□□ -1.8
UBR1-203ENST00000562173 CHCHD5Q9BSY4 110 aa3.8□□□□□ -1.8
UBR1-203ENST00000562173 FAAP24Q9BTP7 215 aa3.8□□□□□ -1.8
UBR1-203ENST00000562173 NCOR1P1Q9H4R4 102 aa3.8□□□□□ -1.8
UBR1-203ENST00000562173 AMBNQ9NP70 447 aa3.8□□□□□ -1.8
UBR1-203ENST00000562173 RAB9BQ9NP90 201 aa3.8□□□□□ -1.8
UBR1-203ENST00000562173 RABL2AQ9UBK7 228 aaPredicted RBP3.8□□□□□ -1.8
UBR1-203ENST00000562173 AP3M1Q9Y2T2 418 aa3.8□□□□□ -1.8
UBR1-203ENST00000562173 PEX16Q9Y5Y5 336 aa3.8□□□□□ -1.8
UBR1-203ENST00000562173 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.79□□□□□ -1.8
UBR1-203ENST00000562173 E2F6O75461 281 aa3.79□□□□□ -1.8
UBR1-203ENST00000562173 GMNNO75496 209 aa3.79□□□□□ -1.8
UBR1-203ENST00000562173 SCTP09683 121 aa3.79□□□□□ -1.8
UBR1-203ENST00000562173 DEFB1P60022 68 aa3.79□□□□□ -1.8
UBR1-203ENST00000562173 RPS27AP62979 156 aaKnown RBP3.79□□□□□ -1.8
UBR1-203ENST00000562173 PAX5Q02548 391 aa3.79□□□□□ -1.8
UBR1-203ENST00000562173 MRPL28Q13084 256 aaKnown RBP3.79□□□□□ -1.8
UBR1-203ENST00000562173 MED21Q13503 144 aa3.79□□□□□ -1.8
UBR1-203ENST00000562173 HMGN3Q15651 99 aa3.79□□□□□ -1.8
UBR1-203ENST00000562173 C15orf32Q32M92 178 aa3.79□□□□□ -1.8
UBR1-203ENST00000562173 Q3ZCU0 254 aa3.79□□□□□ -1.8
UBR1-203ENST00000562173 OR2B11Q5JQS5 317 aa3.79□□□□□ -1.8
UBR1-203ENST00000562173 DDI2Q5TDH0 399 aa3.79□□□□□ -1.8
UBR1-203ENST00000562173 TMEM244Q5VVB8 128 aa3.79□□□□□ -1.8
UBR1-203ENST00000562173 LEMD1Q68G75 181 aa3.79□□□□□ -1.8
UBR1-203ENST00000562173 C6orf201Q7Z4U5 140 aa3.79□□□□□ -1.8
UBR1-203ENST00000562173 CROCCP2Q86T23 111 aa3.79□□□□□ -1.8
UBR1-203ENST00000562173 GAPTQ8N292 157 aa3.79□□□□□ -1.8
UBR1-203ENST00000562173 GIMAP1Q8WWP7 306 aa3.79□□□□□ -1.8
UBR1-203ENST00000562173 MAFIPQ8WZ33 124 aa3.79□□□□□ -1.8
UBR1-203ENST00000562173 RARRES2Q99969 163 aa3.79□□□□□ -1.8
UBR1-203ENST00000562173 SIKE1Q9BRV8 207 aa3.79□□□□□ -1.8
UBR1-203ENST00000562173 SELENOIQ9C0D9 397 aa3.79□□□□□ -1.8
UBR1-203ENST00000562173 ZNF446Q9NWS9 450 aa3.79□□□□□ -1.8
UBR1-203ENST00000562173 WASHC3Q9Y3C0 194 aa3.79□□□□□ -1.8
UBR1-203ENST00000562173 TMEM14AQ9Y6G1 99 aa3.79□□□□□ -1.8
UBR1-203ENST00000562173 TRBV9A0A0B4J1U6 114 aa3.78□□□□□ -1.8
UBR1-203ENST00000562173 PNMA8CA0A1B0GUJ8 204 aa3.78□□□□□ -1.8
UBR1-203ENST00000562173 C5orf51A6NDU8 294 aa3.78□□□□□ -1.8
UBR1-203ENST00000562173 M0R1X1 148 aa3.78□□□□□ -1.8
UBR1-203ENST00000562173 GNGT2O14610 69 aa3.78□□□□□ -1.8
UBR1-203ENST00000562173 YPEL1O60688 119 aa3.78□□□□□ -1.8
UBR1-203ENST00000562173 FKBP6O75344 327 aa3.78□□□□□ -1.8
UBR1-203ENST00000562173 DIRAS3O95661 229 aa3.78□□□□□ -1.8
UBR1-203ENST00000562173 PRM2P04554 102 aa3.78□□□□□ -1.8
UBR1-203ENST00000562173 ISG15P05161 165 aa3.78□□□□□ -1.8
UBR1-203ENST00000562173 CTSDP07339 412 aaPredicted RBP3.78□□□□□ -1.8
UBR1-203ENST00000562173 RPSAP08865 295 aaKnown RBP3.78□□□□□ -1.8
UBR1-203ENST00000562173 OR9G9P0C7N8 305 aa3.78□□□□□ -1.8
UBR1-203ENST00000562173 GZMHP20718 246 aa3.78□□□□□ -1.8
UBR1-203ENST00000562173 GBX2P52951 348 aaPredicted RBP3.78□□□□□ -1.8
UBR1-203ENST00000562173 KRTAP10-12P60413 245 aa3.78□□□□□ -1.8
UBR1-203ENST00000562173 ATP5G2Q06055 141 aa3.78□□□□□ -1.8
UBR1-203ENST00000562173 TMEM267Q0VDI3 215 aaPredicted RBP3.78□□□□□ -1.8
UBR1-203ENST00000562173 RIGQ13278 110 aa3.78□□□□□ -1.8
UBR1-203ENST00000562173 OR2G6Q5TZ20 316 aa3.78□□□□□ -1.8
UBR1-203ENST00000562173 PYHIN1Q6K0P9 492 aa3.78□□□□□ -1.8
UBR1-203ENST00000562173 GLIPR1L1Q6UWM5 242 aa3.78□□□□□ -1.8
UBR1-203ENST00000562173 SPATA12Q7Z6I5 190 aa3.78□□□□□ -1.8
UBR1-203ENST00000562173 DHFR2Q86XF0 187 aa3.78□□□□□ -1.8
UBR1-203ENST00000562173 SERPINA12Q8IW75 414 aa3.78□□□□□ -1.8
UBR1-203ENST00000562173 AQP12AQ8IXF9 295 aa3.78□□□□□ -1.8
UBR1-203ENST00000562173 POM121L12Q8N7R1 296 aa3.78□□□□□ -1.8
UBR1-203ENST00000562173 OR1L6Q8NGR2 347 aa3.78□□□□□ -1.8
UBR1-203ENST00000562173 OR2K2Q8NGT1 345 aa3.78□□□□□ -1.8
UBR1-203ENST00000562173 SRSF12Q8WXF0 261 aaKnown RBP3.78□□□□□ -1.8
UBR1-203ENST00000562173 YPEL2Q96QA6 119 aa3.78□□□□□ -1.8
UBR1-203ENST00000562173 PHB2Q99623 299 aa3.78□□□□□ -1.8
UBR1-203ENST00000562173 ZNF184Q99676 751 aaPredicted RBP3.78□□□□□ -1.8
UBR1-203ENST00000562173 CIB1Q99828 191 aa3.78□□□□□ -1.8
UBR1-203ENST00000562173 ZNF430Q9H8G1 570 aaPredicted RBP3.78□□□□□ -1.8
UBR1-203ENST00000562173 JPT2Q9H910 190 aa3.78□□□□□ -1.8
UBR1-203ENST00000562173 IGKV1D-8A0A087WSZ0 117 aa3.77□□□□□ -1.81
UBR1-203ENST00000562173 TRAV3A0A0B4J244 114 aa3.77□□□□□ -1.81
UBR1-203ENST00000562173 IGHV3-66A0A0C4DH42 116 aa3.77□□□□□ -1.81
UBR1-203ENST00000562173 KNCNA6PVL3 124 aa3.77□□□□□ -1.81
UBR1-203ENST00000562173 SULT1C4O75897 302 aa3.77□□□□□ -1.81
UBR1-203ENST00000562173 CA1P00915 261 aaPredicted RBP3.77□□□□□ -1.81
UBR1-203ENST00000562173 IFNA4P05014 189 aa3.77□□□□□ -1.81
UBR1-203ENST00000562173 DBTP11182 482 aaKnown RBP3.77□□□□□ -1.81
UBR1-203ENST00000562173 MGMTP16455 207 aa3.77□□□□□ -1.81
UBR1-203ENST00000562173 RAB3AP20336 220 aa3.77□□□□□ -1.81
UBR1-203ENST00000562173 HTR2CP28335 458 aa3.77□□□□□ -1.81
UBR1-203ENST00000562173 ZNF93P35789 620 aaPredicted RBP3.77□□□□□ -1.81
UBR1-203ENST00000562173 RPL30P62888 115 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms