RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 TGOLN2O43493 480 aa7.72□□□□□ -1.17
CLK3-205ENST00000561673 GABARAPO95166 117 aa7.72□□□□□ -1.17
CLK3-205ENST00000561673 IGKV1-39P01597 117 aa7.72□□□□□ -1.17
CLK3-205ENST00000561673 IGKV1D-39P04432 117 aa7.72□□□□□ -1.17
CLK3-205ENST00000561673 IFNA6P05013 189 aa7.72□□□□□ -1.17
CLK3-205ENST00000561673 C8orf88P0DMB2 117 aa7.72□□□□□ -1.17
CLK3-205ENST00000561673 S100GP29377 79 aa7.72□□□□□ -1.17
CLK3-205ENST00000561673 ZFAND6Q6FIF0 208 aa7.72□□□□□ -1.17
CLK3-205ENST00000561673 BTNL8Q6UX41 500 aa7.72□□□□□ -1.17
CLK3-205ENST00000561673 SLC38A6Q8IZM9 456 aa7.72□□□□□ -1.17
CLK3-205ENST00000561673 ISOC1Q96CN7 298 aa7.72□□□□□ -1.17
CLK3-205ENST00000561673 SEC22AQ96IW7 307 aa7.72□□□□□ -1.17
CLK3-205ENST00000561673 HIPK2Q9H2X6 1198 aa7.72□□□□□ -1.17
CLK3-205ENST00000561673 SRD5A3Q9H8P0 318 aa7.72□□□□□ -1.17
CLK3-205ENST00000561673 RETNQ9HD89 108 aa7.72□□□□□ -1.17
CLK3-205ENST00000561673 PALMDQ9NP74 551 aa7.72□□□□□ -1.17
CLK3-205ENST00000561673 FAM212BQ9NTI7 297 aaPredicted RBP7.72□□□□□ -1.17
CLK3-205ENST00000561673 TMEM14BQ9NUH8 114 aa7.72□□□□□ -1.17
CLK3-205ENST00000561673 FKBP11Q9NYL4 201 aa7.72□□□□□ -1.17
CLK3-205ENST00000561673 F11RQ9Y624 299 aaKnown RBP7.72□□□□□ -1.17
CLK3-205ENST00000561673 TENM2Q9NT68 2774 aa7.72□□□□□ -1.17
CLK3-205ENST00000561673 C15orf61A6NNL5 157 aa7.71□□□□□ -1.18
CLK3-205ENST00000561673 F8W735 103 aaPredicted RBP7.71□□□□□ -1.18
CLK3-205ENST00000561673 K7EIM0 57 aa7.71□□□□□ -1.18
CLK3-205ENST00000561673 SCAF4O95104 1147 aaKnown RBP7.71□□□□□ -1.18
CLK3-205ENST00000561673 ZNF182P17025 639 aaPredicted RBP7.71□□□□□ -1.18
CLK3-205ENST00000561673 ELLP55199 621 aaPredicted RBP7.71□□□□□ -1.18
CLK3-205ENST00000561673 PLECQ15149 4684 aaKnown RBP7.71□□□□□ -1.18
CLK3-205ENST00000561673 RNASE12Q5GAN4 147 aaKnown RBP7.71□□□□□ -1.18
CLK3-205ENST00000561673 GPR107Q5VW38 600 aa7.71□□□□□ -1.18
CLK3-205ENST00000561673 SLC16A13Q7RTY0 426 aa7.71□□□□□ -1.18
CLK3-205ENST00000561673 OR5B3Q8NH48 314 aa7.71□□□□□ -1.18
CLK3-205ENST00000561673 OR52I2Q8NH67 350 aa7.71□□□□□ -1.18
CLK3-205ENST00000561673 SCARB1Q8WTV0 552 aa7.71□□□□□ -1.18
CLK3-205ENST00000561673 AP3S1Q92572 193 aa7.71□□□□□ -1.18
CLK3-205ENST00000561673 MARC2Q969Z3 335 aa7.71□□□□□ -1.18
CLK3-205ENST00000561673 BSCL2Q96G97 398 aaPredicted RBP7.71□□□□□ -1.18
CLK3-205ENST00000561673 TMEM56Q96MV1 263 aa7.71□□□□□ -1.18
CLK3-205ENST00000561673 TSC22D3Q99576 134 aa7.71□□□□□ -1.18
CLK3-205ENST00000561673 CHRDL1Q9BU40 450 aa7.71□□□□□ -1.18
CLK3-205ENST00000561673 MRPL27Q9P0M9 148 aaKnown RBP7.71□□□□□ -1.18
CLK3-205ENST00000561673 UFC1Q9Y3C8 167 aa7.71□□□□□ -1.18
CLK3-205ENST00000561673 CD3DP04234 171 aa7.7□□□□□ -1.18
CLK3-205ENST00000561673 PI3P19957 117 aa7.7□□□□□ -1.18
CLK3-205ENST00000561673 SPSB3Q6PJ21 355 aa7.7□□□□□ -1.18
CLK3-205ENST00000561673 H2BFWTQ7Z2G1 175 aa7.7□□□□□ -1.18
CLK3-205ENST00000561673 UBAC2Q8NBM4 344 aa7.7□□□□□ -1.18
CLK3-205ENST00000561673 OR52B4Q8NGK2 314 aa7.7□□□□□ -1.18
CLK3-205ENST00000561673 OR1L6Q8NGR2 347 aa7.7□□□□□ -1.18
CLK3-205ENST00000561673 OR1P1Q8NH06 330 aa7.7□□□□□ -1.18
CLK3-205ENST00000561673 OR4A16Q8NH70 328 aa7.7□□□□□ -1.18
CLK3-205ENST00000561673 TMEM190Q8WZ59 177 aa7.7□□□□□ -1.18
CLK3-205ENST00000561673 MRGPRFQ96AM1 343 aa7.7□□□□□ -1.18
CLK3-205ENST00000561673 ABHD1Q96SE0 405 aa7.7□□□□□ -1.18
CLK3-205ENST00000561673 FAM110AQ9BQ89 295 aa7.7□□□□□ -1.18
CLK3-205ENST00000561673 GAR1Q9NY12 217 aaKnown RBP7.7□□□□□ -1.18
CLK3-205ENST00000561673 C21orf62Q9NYP8 219 aa7.7□□□□□ -1.18
CLK3-205ENST00000561673 EXTL2Q9UBQ6 330 aa7.7□□□□□ -1.18
CLK3-205ENST00000561673 MTFP1Q9UDX5 166 aa7.7□□□□□ -1.18
CLK3-205ENST00000561673 IGHV3OR16-8A0A075B7F1 116 aa7.69□□□□□ -1.18
CLK3-205ENST00000561673 TRAV25A0A0B4J276 109 aa7.69□□□□□ -1.18
CLK3-205ENST00000561673 NDUFA4O00483 81 aa7.69□□□□□ -1.18
CLK3-205ENST00000561673 CTSGP08311 255 aa7.69□□□□□ -1.18
CLK3-205ENST00000561673 PGAM2P15259 253 aa7.69□□□□□ -1.18
CLK3-205ENST00000561673 ADMP35318 185 aa7.69□□□□□ -1.18
CLK3-205ENST00000561673 RND3P61587 244 aa7.69□□□□□ -1.18
CLK3-205ENST00000561673 IZUMO4Q1ZYL8 232 aa7.69□□□□□ -1.18
CLK3-205ENST00000561673 ANKRD55Q3KP44 614 aa7.69□□□□□ -1.18
CLK3-205ENST00000561673 RNASE10Q5GAN6 216 aaKnown RBP7.69□□□□□ -1.18
CLK3-205ENST00000561673 RBPMS2Q6ZRY4 209 aaKnown RBP7.69□□□□□ -1.18
CLK3-205ENST00000561673 LHFPL1Q86WI0 220 aa7.69□□□□□ -1.18
CLK3-205ENST00000561673 OR2C3Q8N628 320 aa7.69□□□□□ -1.18
CLK3-205ENST00000561673 OR4D10Q8NGI6 311 aa7.69□□□□□ -1.18
CLK3-205ENST00000561673 ZNF486Q96H40 463 aaPredicted RBP7.69□□□□□ -1.18
CLK3-205ENST00000561673 ATP6V0BQ99437 205 aa7.69□□□□□ -1.18
CLK3-205ENST00000561673 C5orf66Q9H5L9 145 aa7.69□□□□□ -1.18
CLK3-205ENST00000561673 DAZ1Q9NQZ3 744 aaKnown RBP7.69□□□□□ -1.18
CLK3-205ENST00000561673 HYDINQ4G0P3 5121 aa7.69□□□□□ -1.18
CLK3-205ENST00000561673 I3L2K1 104 aa7.68□□□□□ -1.18
CLK3-205ENST00000561673 ZNF207O43670 478 aaKnown RBP7.68□□□□□ -1.18
CLK3-205ENST00000561673 IGKV1-5P01602 117 aa7.68□□□□□ -1.18
CLK3-205ENST00000561673 ALDH3B2P48448 385 aa7.68□□□□□ -1.18
CLK3-205ENST00000561673 PIGPP57054 158 aa7.68□□□□□ -1.18
CLK3-205ENST00000561673 HSPE1P61604 102 aaKnown RBP7.68□□□□□ -1.18
CLK3-205ENST00000561673 PRCDQ00LT1 54 aa7.68□□□□□ -1.18
CLK3-205ENST00000561673 Q56UQ5 140 aa7.68□□□□□ -1.18
CLK3-205ENST00000561673 ARRDC1Q8N5I2 433 aa7.68□□□□□ -1.18
CLK3-205ENST00000561673 TERB2Q8NHR7 220 aa7.68□□□□□ -1.18
CLK3-205ENST00000561673 MISP3Q96FF7 219 aa7.68□□□□□ -1.18
CLK3-205ENST00000561673 ZNF414Q96IQ9 312 aa7.68□□□□□ -1.18
CLK3-205ENST00000561673 TP53RKQ96S44 253 aa7.68□□□□□ -1.18
CLK3-205ENST00000561673 C20orf24Q9BUV8 137 aa7.68□□□□□ -1.18
CLK3-205ENST00000561673 MRPS26Q9BYN8 205 aaKnown RBP7.68□□□□□ -1.18
CLK3-205ENST00000561673 MIXL1Q9H2W2 232 aa7.68□□□□□ -1.18
CLK3-205ENST00000561673 A0A0B4J293 547 aa7.67□□□□□ -1.18
CLK3-205ENST00000561673 C3orf85A0A1B0GTC6 90 aa7.67□□□□□ -1.18
CLK3-205ENST00000561673 K7EMT4 169 aa7.67□□□□□ -1.18
CLK3-205ENST00000561673 CTDSP2O14595 271 aa7.67□□□□□ -1.18
CLK3-205ENST00000561673 TSPAN4O14817 238 aa7.67□□□□□ -1.18
CLK3-205ENST00000561673 IGHV3-48P01763 117 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms