RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 THYN1Q9P016 225 aa7.78□□□□□ -1.16
HERC1-212ENST00000561348 GPR132Q9UNW8 380 aa7.78□□□□□ -1.16
HERC1-212ENST00000561348 TRBV9A0A0B4J1U6 114 aa7.77□□□□□ -1.17
HERC1-212ENST00000561348 MFSD2BA6NFX1 497 aa7.77□□□□□ -1.17
HERC1-212ENST00000561348 CRYM-AS1A6NIL9 109 aa7.77□□□□□ -1.17
HERC1-212ENST00000561348 IGHV3-48P01763 117 aa7.77□□□□□ -1.17
HERC1-212ENST00000561348 CRYGCP07315 174 aa7.77□□□□□ -1.17
HERC1-212ENST00000561348 GPR183P32249 361 aa7.77□□□□□ -1.17
HERC1-212ENST00000561348 HOXA1P49639 335 aaPredicted RBP7.77□□□□□ -1.17
HERC1-212ENST00000561348 ERHP84090 104 aaKnown RBP7.77□□□□□ -1.17
HERC1-212ENST00000561348 SURF2Q15527 256 aaPredicted RBP7.77□□□□□ -1.17
HERC1-212ENST00000561348 Q56UQ5 140 aa7.77□□□□□ -1.17
HERC1-212ENST00000561348 GDPD1Q8N9F7 314 aa7.77□□□□□ -1.17
HERC1-212ENST00000561348 TRIM63Q969Q1 353 aa7.77□□□□□ -1.17
HERC1-212ENST00000561348 FANCD2OSQ96PS1 177 aa7.77□□□□□ -1.17
HERC1-212ENST00000561348 SRRQ9GZT4 340 aa7.77□□□□□ -1.17
HERC1-212ENST00000561348 TMEM222Q9H0R3 208 aa7.77□□□□□ -1.17
HERC1-212ENST00000561348 NDUFA4L2Q9NRX3 87 aa7.77□□□□□ -1.17
HERC1-212ENST00000561348 FAM212BQ9NTI7 297 aaPredicted RBP7.77□□□□□ -1.17
HERC1-212ENST00000561348 PTTG2Q9NZH5 202 aa7.77□□□□□ -1.17
HERC1-212ENST00000561348 ZMAT5Q9UDW3 170 aaKnown RBP7.77□□□□□ -1.17
HERC1-212ENST00000561348 IGLV11-55A0A075B6I3 123 aa7.76□□□□□ -1.17
HERC1-212ENST00000561348 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.76□□□□□ -1.17
HERC1-212ENST00000561348 K7EIL1 84 aa7.76□□□□□ -1.17
HERC1-212ENST00000561348 BMPR1BO00238 502 aa7.76□□□□□ -1.17
HERC1-212ENST00000561348 ST8SIA3O43173 380 aa7.76□□□□□ -1.17
HERC1-212ENST00000561348 GGCTO75223 188 aaKnown RBP7.76□□□□□ -1.17
HERC1-212ENST00000561348 CLEC3BP05452 202 aa7.76□□□□□ -1.17
HERC1-212ENST00000561348 FGF2P09038 288 aa7.76□□□□□ -1.17
HERC1-212ENST00000561348 ANXA3P12429 323 aa7.76□□□□□ -1.17
HERC1-212ENST00000561348 UCP1P25874 307 aa7.76□□□□□ -1.17
HERC1-212ENST00000561348 PTBP1P26599 531 aaKnown RBP eCLIP7.76□□□□□ -1.17
HERC1-212ENST00000561348 SNCAP37840 140 aa7.76□□□□□ -1.17
HERC1-212ENST00000561348 CCR6P51684 374 aa7.76□□□□□ -1.17
HERC1-212ENST00000561348 HSPE1P61604 102 aaKnown RBP7.76□□□□□ -1.17
HERC1-212ENST00000561348 DHODHQ02127 395 aa7.76□□□□□ -1.17
HERC1-212ENST00000561348 BAK1Q16611 211 aa7.76□□□□□ -1.17
HERC1-212ENST00000561348 THOC7Q6I9Y2 204 aaKnown RBP7.76□□□□□ -1.17
HERC1-212ENST00000561348 ACSM6Q6P461 480 aa7.76□□□□□ -1.17
HERC1-212ENST00000561348 PLET1Q6UQ28 207 aa7.76□□□□□ -1.17
HERC1-212ENST00000561348 ZNF429Q86V71 674 aa7.76□□□□□ -1.17
HERC1-212ENST00000561348 SELENOHQ8IZQ5 122 aaKnown RBP7.76□□□□□ -1.17
HERC1-212ENST00000561348 OR9G4Q8NGQ1 327 aa7.76□□□□□ -1.17
HERC1-212ENST00000561348 OR5B3Q8NH48 314 aa7.76□□□□□ -1.17
HERC1-212ENST00000561348 DYNLRB2Q8TF09 96 aa7.76□□□□□ -1.17
HERC1-212ENST00000561348 GLYATL2Q8WU03 294 aa7.76□□□□□ -1.17
HERC1-212ENST00000561348 RBPMSQ93062 196 aaKnown RBP7.76□□□□□ -1.17
HERC1-212ENST00000561348 CXorf58Q96LI9 332 aa7.76□□□□□ -1.17
HERC1-212ENST00000561348 TMEM14BQ9NUH8 114 aa7.76□□□□□ -1.17
HERC1-212ENST00000561348 ZNF256Q9Y2P7 627 aaPredicted RBP7.76□□□□□ -1.17
HERC1-212ENST00000561348 A0A0B4J293 547 aa7.75□□□□□ -1.17
HERC1-212ENST00000561348 A0A0G2JRQ6 117 aa7.75□□□□□ -1.17
HERC1-212ENST00000561348 OR2T8A6NH00 312 aa7.75□□□□□ -1.17
HERC1-212ENST00000561348 CENPXA8MT69 81 aa7.75□□□□□ -1.17
HERC1-212ENST00000561348 CEBPZOSA8MTT3 80 aa7.75□□□□□ -1.17
HERC1-212ENST00000561348 BRI3O95415 125 aa7.75□□□□□ -1.17
HERC1-212ENST00000561348 SPNP16150 400 aa7.75□□□□□ -1.17
HERC1-212ENST00000561348 INSL3P51460 131 aa7.75□□□□□ -1.17
HERC1-212ENST00000561348 KLF5Q13887 457 aaPredicted RBP7.75□□□□□ -1.17
HERC1-212ENST00000561348 HSD17B13Q7Z5P4 300 aaPredicted RBP7.75□□□□□ -1.17
HERC1-212ENST00000561348 LHFPL5Q8TAF8 219 aa7.75□□□□□ -1.17
HERC1-212ENST00000561348 TMEM230Q96A57 120 aa7.75□□□□□ -1.17
HERC1-212ENST00000561348 CCDC140Q96MF4 163 aa7.75□□□□□ -1.17
HERC1-212ENST00000561348 SRSF8Q9BRL6 282 aaKnown RBP7.75□□□□□ -1.17
HERC1-212ENST00000561348 SLC2A8Q9NY64 477 aa7.75□□□□□ -1.17
HERC1-212ENST00000561348 PEMTQ9UBM1 199 aa7.75□□□□□ -1.17
HERC1-212ENST00000561348 CACNG5Q9UF02 275 aa7.75□□□□□ -1.17
HERC1-212ENST00000561348 DMRT1Q9Y5R6 373 aa7.75□□□□□ -1.17
HERC1-212ENST00000561348 F11RQ9Y624 299 aaKnown RBP7.75□□□□□ -1.17
HERC1-212ENST00000561348 IGHV3OR16-8A0A075B7F1 116 aa7.74□□□□□ -1.17
HERC1-212ENST00000561348 TRBV7-1A0A0A6YYK4 115 aa7.74□□□□□ -1.17
HERC1-212ENST00000561348 B3GALNT1O75752 331 aa7.74□□□□□ -1.17
HERC1-212ENST00000561348 CDS2O95674 445 aa7.74□□□□□ -1.17
HERC1-212ENST00000561348 MFAP2P55001 183 aa7.74□□□□□ -1.17
HERC1-212ENST00000561348 PRCDQ00LT1 54 aa7.74□□□□□ -1.17
HERC1-212ENST00000561348 EGFEM1PQ0D2K5 195 aa7.74□□□□□ -1.17
HERC1-212ENST00000561348 FAM106AQ4KMX7 169 aa7.74□□□□□ -1.17
HERC1-212ENST00000561348 LYZL2Q7Z4W2 148 aa7.74□□□□□ -1.17
HERC1-212ENST00000561348 CENPSQ8N2Z9 138 aa7.74□□□□□ -1.17
HERC1-212ENST00000561348 GPR146Q96CH1 333 aa7.74□□□□□ -1.17
HERC1-212ENST00000561348 C20orf24Q9BUV8 137 aa7.74□□□□□ -1.17
HERC1-212ENST00000561348 HEYLQ9NQ87 328 aaPredicted RBP7.74□□□□□ -1.17
HERC1-212ENST00000561348 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.74□□□□□ -1.17
HERC1-212ENST00000561348 C21orf62Q9NYP8 219 aa7.74□□□□□ -1.17
HERC1-212ENST00000561348 ZNF207O43670 478 aaKnown RBP7.73□□□□□ -1.17
HERC1-212ENST00000561348 YIF1AO95070 293 aa7.73□□□□□ -1.17
HERC1-212ENST00000561348 SULT1A3P0DMM9 295 aa7.73□□□□□ -1.17
HERC1-212ENST00000561348 SULT1A4P0DMN0 295 aa7.73□□□□□ -1.17
HERC1-212ENST00000561348 IL7P13232 177 aa7.73□□□□□ -1.17
HERC1-212ENST00000561348 GP9P14770 177 aa7.73□□□□□ -1.17
HERC1-212ENST00000561348 EDN2P20800 178 aa7.73□□□□□ -1.17
HERC1-212ENST00000561348 SUB1P53999 127 aaKnown RBP eCLIP7.73□□□□□ -1.17
HERC1-212ENST00000561348 CD69Q07108 199 aa7.73□□□□□ -1.17
HERC1-212ENST00000561348 TMEM187Q14656 261 aa7.73□□□□□ -1.17
HERC1-212ENST00000561348 GUCA2BQ16661 112 aa7.73□□□□□ -1.17
HERC1-212ENST00000561348 Q6ZRM9 215 aa7.73□□□□□ -1.17
HERC1-212ENST00000561348 LGI3Q8N145 548 aa7.73□□□□□ -1.17
HERC1-212ENST00000561348 OR2C3Q8N628 320 aa7.73□□□□□ -1.17
HERC1-212ENST00000561348 OR1L6Q8NGR2 347 aa7.73□□□□□ -1.17
HERC1-212ENST00000561348 OR1S1Q8NH92 325 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms