RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 ABHD5Q8WTS1 349 aa8.2□□□□□ -1.1
USP3-219ENST00000561326 ST8SIA2Q92186 375 aa8.2□□□□□ -1.1
USP3-219ENST00000561326 PHYHIPLQ96FC7 376 aa8.2□□□□□ -1.1
USP3-219ENST00000561326 OR4C12Q96R67 309 aa8.2□□□□□ -1.1
USP3-219ENST00000561326 GGACTQ9BVM4 153 aa8.2□□□□□ -1.1
USP3-219ENST00000561326 CYTL1Q9NRR1 136 aa8.2□□□□□ -1.1
USP3-219ENST00000561326 MXRA5Q9NR99 2828 aa8.19□□□□□ -1.1
USP3-219ENST00000561326 A6NDX4 124 aa8.19□□□□□ -1.1
USP3-219ENST00000561326 E7EUB6 86 aa8.19□□□□□ -1.1
USP3-219ENST00000561326 IER3P46695 156 aa8.19□□□□□ -1.1
USP3-219ENST00000561326 RAB14P61106 215 aa8.19□□□□□ -1.1
USP3-219ENST00000561326 DLK1P80370 383 aa8.19□□□□□ -1.1
USP3-219ENST00000561326 IFITM2Q01629 132 aa8.19□□□□□ -1.1
USP3-219ENST00000561326 C10orf55Q5SWW7 151 aa8.19□□□□□ -1.1
USP3-219ENST00000561326 RPL7L1Q6DKI1 246 aaKnown RBP8.19□□□□□ -1.1
USP3-219ENST00000561326 Q6YL49 198 aa8.19□□□□□ -1.1
USP3-219ENST00000561326 BCL6BQ8N143 479 aaPredicted RBP8.19□□□□□ -1.1
USP3-219ENST00000561326 ZNF680Q8NEM1 530 aa8.19□□□□□ -1.1
USP3-219ENST00000561326 RNASEH2CQ8TDP1 164 aaKnown RBP8.19□□□□□ -1.1
USP3-219ENST00000561326 SSMEM1Q8WWF3 244 aa8.19□□□□□ -1.1
USP3-219ENST00000561326 CACNG8Q8WXS5 425 aa8.19□□□□□ -1.1
USP3-219ENST00000561326 ARPC1AQ92747 370 aa8.19□□□□□ -1.1
USP3-219ENST00000561326 TMEM68Q96MH6 324 aa8.19□□□□□ -1.1
USP3-219ENST00000561326 TMEM147Q9BVK8 224 aa8.19□□□□□ -1.1
USP3-219ENST00000561326 UQCC1Q9NVA1 299 aa8.19□□□□□ -1.1
USP3-219ENST00000561326 UBQLN2Q9UHD9 624 aa8.19□□□□□ -1.1
USP3-219ENST00000561326 IGLC7A0M8Q6 106 aa8.18□□□□□ -1.1
USP3-219ENST00000561326 CGB1A6NKQ9 187 aa8.18□□□□□ -1.1
USP3-219ENST00000561326 PMS2P5A8MQ11 134 aa8.18□□□□□ -1.1
USP3-219ENST00000561326 CORTO00230 105 aa8.18□□□□□ -1.1
USP3-219ENST00000561326 RGS13O14921 159 aa8.18□□□□□ -1.1
USP3-219ENST00000561326 RNASE2P10153 161 aaKnown RBP8.18□□□□□ -1.1
USP3-219ENST00000561326 DEFA4P12838 97 aa8.18□□□□□ -1.1
USP3-219ENST00000561326 FOSL1P15407 271 aa8.18□□□□□ -1.1
USP3-219ENST00000561326 GPX4P36969 197 aaPredicted RBP8.18□□□□□ -1.1
USP3-219ENST00000561326 WT1-ASQ06250 92 aa8.18□□□□□ -1.1
USP3-219ENST00000561326 LY6EQ16553 131 aa8.18□□□□□ -1.1
USP3-219ENST00000561326 BSXQ3C1V8 233 aa8.18□□□□□ -1.1
USP3-219ENST00000561326 ETFRF1Q6IPR1 90 aa8.18□□□□□ -1.1
USP3-219ENST00000561326 RBMS3Q6XE24 437 aaKnown RBP8.18□□□□□ -1.1
USP3-219ENST00000561326 TMEM219Q86XT9 240 aa8.18□□□□□ -1.1
USP3-219ENST00000561326 C5orf56Q8N8D9 126 aa8.18□□□□□ -1.1
USP3-219ENST00000561326 ZNF114Q8NC26 417 aa8.18□□□□□ -1.1
USP3-219ENST00000561326 OR1P1Q8NH06 330 aa8.18□□□□□ -1.1
USP3-219ENST00000561326 SCARB1Q8WTV0 552 aa8.18□□□□□ -1.1
USP3-219ENST00000561326 C22orf15Q8WYQ4 148 aa8.18□□□□□ -1.1
USP3-219ENST00000561326 GNPNAT1Q96EK6 184 aaPredicted RBP8.18□□□□□ -1.1
USP3-219ENST00000561326 BSCL2Q96G97 398 aaPredicted RBP8.18□□□□□ -1.1
USP3-219ENST00000561326 GINS3Q9BRX5 216 aa8.18□□□□□ -1.1
USP3-219ENST00000561326 PRDM13Q9H4Q3 707 aa8.18□□□□□ -1.1
USP3-219ENST00000561326 WFDC1Q9HC57 220 aa8.18□□□□□ -1.1
USP3-219ENST00000561326 TMEM160Q9NX00 188 aa8.18□□□□□ -1.1
USP3-219ENST00000561326 SOX21Q9Y651 276 aaPredicted RBP8.18□□□□□ -1.1
USP3-219ENST00000561326 TEX22C9J3V5 150 aa8.17□□□□□ -1.1
USP3-219ENST00000561326 FNDC10F2Z333 226 aa8.17□□□□□ -1.1
USP3-219ENST00000561326 SEC11BP0C7V7 166 aa8.17□□□□□ -1.1
USP3-219ENST00000561326 ARL16Q0P5N6 197 aa8.17□□□□□ -1.1
USP3-219ENST00000561326 RAB31Q13636 194 aa8.17□□□□□ -1.1
USP3-219ENST00000561326 EXOSC2Q13868 293 aaKnown RBP8.17□□□□□ -1.1
USP3-219ENST00000561326 TUSC1Q2TAM9 212 aa8.17□□□□□ -1.1
USP3-219ENST00000561326 FBLN7Q53RD9 439 aa8.17□□□□□ -1.1
USP3-219ENST00000561326 ALKAL2Q6UX46 152 aa8.17□□□□□ -1.1
USP3-219ENST00000561326 HAPLN4Q86UW8 402 aa8.17□□□□□ -1.1
USP3-219ENST00000561326 ZNF709Q8N972 641 aa8.17□□□□□ -1.1
USP3-219ENST00000561326 LRRC20Q8TCA0 184 aa8.17□□□□□ -1.1
USP3-219ENST00000561326 P2RX4Q99571 388 aa8.17□□□□□ -1.1
USP3-219ENST00000561326 PARD6GQ9BYG4 376 aaPredicted RBP8.17□□□□□ -1.1
USP3-219ENST00000561326 ARV1Q9H2C2 271 aa8.17□□□□□ -1.1
USP3-219ENST00000561326 NPVFQ9HCQ7 196 aa8.17□□□□□ -1.1
USP3-219ENST00000561326 FLNBO75369 2602 aaKnown RBP8.16□□□□□ -1.1
USP3-219ENST00000561326 IGHV7-81A0A0B4J1V7 117 aa8.16□□□□□ -1.1
USP3-219ENST00000561326 MDFIC2A0A1B0GVS7 189 aa8.16□□□□□ -1.1
USP3-219ENST00000561326 A0A1B0GW64 132 aa8.16□□□□□ -1.1
USP3-219ENST00000561326 RPS10-NUDT3A0A1W2PQS6 291 aa8.16□□□□□ -1.1
USP3-219ENST00000561326 SMCO3A2RU48 225 aa8.16□□□□□ -1.1
USP3-219ENST00000561326 MPDU1O75352 247 aa8.16□□□□□ -1.1
USP3-219ENST00000561326 FBXO24O75426 580 aa8.16□□□□□ -1.1
USP3-219ENST00000561326 CFDP00746 253 aaPredicted RBP8.16□□□□□ -1.1
USP3-219ENST00000561326 IGHV4-59P01825 116 aa8.16□□□□□ -1.1
USP3-219ENST00000561326 REG1AP05451 166 aa8.16□□□□□ -1.1
USP3-219ENST00000561326 AREGP15514 252 aa8.16□□□□□ -1.1
USP3-219ENST00000561326 SSBP2P81877 361 aaPredicted RBP8.16□□□□□ -1.1
USP3-219ENST00000561326 KRTAP1-1Q07627 177 aa8.16□□□□□ -1.1
USP3-219ENST00000561326 TTC9CQ8N5M4 171 aa8.16□□□□□ -1.1
USP3-219ENST00000561326 SGMS2Q8NHU3 365 aa8.16□□□□□ -1.1
USP3-219ENST00000561326 TMUB1Q9BVT8 246 aa8.16□□□□□ -1.1
USP3-219ENST00000561326 WNT10AQ9GZT5 417 aa8.16□□□□□ -1.1
USP3-219ENST00000561326 THYN1Q9P016 225 aa8.16□□□□□ -1.1
USP3-219ENST00000561326 F11RQ9Y624 299 aaKnown RBP8.16□□□□□ -1.1
USP3-219ENST00000561326 UBE2L5PA0A1B0GUS4 154 aa8.15□□□□□ -1.1
USP3-219ENST00000561326 NPIPB5A8MRT5 1133 aa8.15□□□□□ -1.1
USP3-219ENST00000561326 C17orf112F2Z3M2 114 aa8.15□□□□□ -1.1
USP3-219ENST00000561326 CRYGCP07315 174 aa8.15□□□□□ -1.1
USP3-219ENST00000561326 APELAP0DMC3 54 aa8.15□□□□□ -1.1
USP3-219ENST00000561326 SPP1P10451 314 aa8.15□□□□□ -1.1
USP3-219ENST00000561326 CD99P14209 185 aa8.15□□□□□ -1.1
USP3-219ENST00000561326 CTRB1P17538 263 aa8.15□□□□□ -1.1
USP3-219ENST00000561326 FGF7P21781 194 aa8.15□□□□□ -1.1
USP3-219ENST00000561326 CD69Q07108 199 aa8.15□□□□□ -1.1
USP3-219ENST00000561326 VWC2Q2TAL6 325 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms