RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 PRSS3P35030 304 aa20.08■□□□□ 0.81
SNRPA1-215ENST00000561187 APOC4P55056 127 aa20.08■□□□□ 0.81
SNRPA1-215ENST00000561187 CROCCP3Q8IVE0 287 aa20.08■□□□□ 0.81
SNRPA1-215ENST00000561187 OR6F1Q8NGZ6 308 aa20.08■□□□□ 0.81
SNRPA1-215ENST00000561187 MISP3Q96FF7 219 aa20.08■□□□□ 0.81
SNRPA1-215ENST00000561187 IGHV3-48P01763 117 aa20.07■□□□□ 0.8
SNRPA1-215ENST00000561187 CTSDP07339 412 aaPredicted RBP20.07■□□□□ 0.8
SNRPA1-215ENST00000561187 LAMTOR1Q6IAA8 161 aa20.07■□□□□ 0.8
SNRPA1-215ENST00000561187 SPSB3Q6PJ21 355 aa20.07■□□□□ 0.8
SNRPA1-215ENST00000561187 LYG2Q86SG7 212 aa20.07■□□□□ 0.8
SNRPA1-215ENST00000561187 OR5B3Q8NH48 314 aa20.07■□□□□ 0.8
SNRPA1-215ENST00000561187 YIPF6Q96EC8 236 aa20.07■□□□□ 0.8
SNRPA1-215ENST00000561187 PRNDQ9UKY0 176 aa20.07■□□□□ 0.8
SNRPA1-215ENST00000561187 IGKV3-7A0A075B6H7 116 aa20.06■□□□□ 0.8
SNRPA1-215ENST00000561187 C15orf61A6NNL5 157 aa20.06■□□□□ 0.8
SNRPA1-215ENST00000561187 SPRY2O43597 315 aa20.06■□□□□ 0.8
SNRPA1-215ENST00000561187 NAT1P18440 290 aa20.06■□□□□ 0.8
SNRPA1-215ENST00000561187 TFPI2P48307 235 aa20.06■□□□□ 0.8
SNRPA1-215ENST00000561187 SNX29P2Q8IUI4 249 aa20.06■□□□□ 0.8
SNRPA1-215ENST00000561187 LYSMD2Q8IV50 215 aa20.06■□□□□ 0.8
SNRPA1-215ENST00000561187 LINC00476Q8WZB0 136 aa20.06■□□□□ 0.8
SNRPA1-215ENST00000561187 TMEM127O75204 238 aa20.05■□□□□ 0.8
SNRPA1-215ENST00000561187 LY6G6CO95867 125 aa20.05■□□□□ 0.8
SNRPA1-215ENST00000561187 TSPAN5P62079 268 aa20.05■□□□□ 0.8
SNRPA1-215ENST00000561187 ZNF124Q15973 351 aa20.05■□□□□ 0.8
SNRPA1-215ENST00000561187 RNASE12Q5GAN4 147 aaKnown RBP20.05■□□□□ 0.8
SNRPA1-215ENST00000561187 TBC1D26Q86UD7 250 aa20.05■□□□□ 0.8
SNRPA1-215ENST00000561187 TMEM56Q96MV1 263 aa20.05■□□□□ 0.8
SNRPA1-215ENST00000561187 COMMD3Q9UBI1 195 aa20.05■□□□□ 0.8
SNRPA1-215ENST00000561187 IGHV3OR16-13A0A075B7E8 117 aa20.04■□□□□ 0.8
SNRPA1-215ENST00000561187 IGHV3-74A0A0B4J1X5 117 aa20.04■□□□□ 0.8
SNRPA1-215ENST00000561187 YIF1AO95070 293 aa20.04■□□□□ 0.8
SNRPA1-215ENST00000561187 SPINK9Q5DT21 86 aa20.04■□□□□ 0.8
SNRPA1-215ENST00000561187 APRG1Q8IVJ8 170 aa20.04■□□□□ 0.8
SNRPA1-215ENST00000561187 SLC25A46Q96AG3 418 aa20.04■□□□□ 0.8
SNRPA1-215ENST00000561187 TMEM14BQ9NUH8 114 aa20.04■□□□□ 0.8
SNRPA1-215ENST00000561187 OR4C46A6NHA9 309 aa20.03■□□□□ 0.8
SNRPA1-215ENST00000561187 ZNF414Q96IQ9 312 aa20.03■□□□□ 0.8
SNRPA1-215ENST00000561187 RNF2Q99496 336 aa20.03■□□□□ 0.8
SNRPA1-215ENST00000561187 FCGR2BP31994 310 aaPredicted RBP20.02■□□□□ 0.8
SNRPA1-215ENST00000561187 BMI1P35226 326 aa20.02■□□□□ 0.8
SNRPA1-215ENST00000561187 NCS1P62166 190 aa20.02■□□□□ 0.8
SNRPA1-215ENST00000561187 Q6ZWC4 215 aa20.02■□□□□ 0.8
SNRPA1-215ENST00000561187 STPG3Q8N7X2 389 aa20.02■□□□□ 0.8
SNRPA1-215ENST00000561187 OR1P1Q8NH06 330 aa20.02■□□□□ 0.8
SNRPA1-215ENST00000561187 GPX8Q8TED1 209 aa20.02■□□□□ 0.8
SNRPA1-215ENST00000561187 MRGPRFQ96AM1 343 aa20.02■□□□□ 0.8
SNRPA1-215ENST00000561187 PINX1Q96BK5 328 aaKnown RBP20.02■□□□□ 0.8
SNRPA1-215ENST00000561187 TSC22D3Q99576 134 aa20.02■□□□□ 0.8
SNRPA1-215ENST00000561187 NUPL2O15504 423 aaKnown RBP20.01■□□□□ 0.79
SNRPA1-215ENST00000561187 IGKV1-39P01597 117 aa20.01■□□□□ 0.79
SNRPA1-215ENST00000561187 IGKV1D-39P04432 117 aa20.01■□□□□ 0.79
SNRPA1-215ENST00000561187 CTSGP08311 255 aa20.01■□□□□ 0.79
SNRPA1-215ENST00000561187 S100GP29377 79 aa20.01■□□□□ 0.79
SNRPA1-215ENST00000561187 IZUMO4Q1ZYL8 232 aa20.01■□□□□ 0.79
SNRPA1-215ENST00000561187 H2BFWTQ7Z2G1 175 aa20.01■□□□□ 0.79
SNRPA1-215ENST00000561187 OR4A16Q8NH70 328 aa20.01■□□□□ 0.79
SNRPA1-215ENST00000561187 VCX3AQ9NNX9 186 aa20.01■□□□□ 0.79
SNRPA1-215ENST00000561187 FKBP11Q9NYL4 201 aa20.01■□□□□ 0.79
SNRPA1-215ENST00000561187 TP53TG1Q9Y2A0 90 aa20.01■□□□□ 0.79
SNRPA1-215ENST00000561187 C15orf62A8K5M9 175 aa20■□□□□ 0.79
SNRPA1-215ENST00000561187 M0QYG6 137 aa20■□□□□ 0.79
SNRPA1-215ENST00000561187 SEC22AQ96IW7 307 aa20■□□□□ 0.79
SNRPA1-215ENST00000561187 RHPN1-AS1Q9BWJ2 59 aa20■□□□□ 0.79
SNRPA1-215ENST00000561187 SMPXQ9UHP9 88 aa20■□□□□ 0.79
SNRPA1-215ENST00000561187 IGHV7-4-1A0A0J9YVY3 117 aa19.99■□□□□ 0.79
SNRPA1-215ENST00000561187 K7EMT4 169 aa19.99■□□□□ 0.79
SNRPA1-215ENST00000561187 MT-CO2P00403 227 aa19.99■□□□□ 0.79
SNRPA1-215ENST00000561187 RELQ04864 619 aaPredicted RBP19.99■□□□□ 0.79
SNRPA1-215ENST00000561187 TNFRSF9Q07011 255 aa19.99■□□□□ 0.79
SNRPA1-215ENST00000561187 WFDC3Q8IUB2 231 aa19.99■□□□□ 0.79
SNRPA1-215ENST00000561187 GBGT1Q8N5D6 347 aa19.99■□□□□ 0.79
SNRPA1-215ENST00000561187 TMEM116Q8NCL8 245 aa19.99■□□□□ 0.79
SNRPA1-215ENST00000561187 NUPR2A6NF83 97 aa19.98■□□□□ 0.79
SNRPA1-215ENST00000561187 I3L2K1 104 aa19.98■□□□□ 0.79
SNRPA1-215ENST00000561187 CHEK1O14757 476 aa19.98■□□□□ 0.79
SNRPA1-215ENST00000561187 VBP1P61758 197 aa19.98■□□□□ 0.79
SNRPA1-215ENST00000561187 RNF183Q96D59 192 aa19.98■□□□□ 0.79
SNRPA1-215ENST00000561187 ATP6V0BQ99437 205 aa19.98■□□□□ 0.79
SNRPA1-215ENST00000561187 A0A087WXM4 84 aa19.97■□□□□ 0.79
SNRPA1-215ENST00000561187 SMIM31A0A1B0GVY4 71 aa19.97■□□□□ 0.79
SNRPA1-215ENST00000561187 UBE2CO00762 179 aa19.97■□□□□ 0.79
SNRPA1-215ENST00000561187 HPGDSO60760 199 aa19.97■□□□□ 0.79
SNRPA1-215ENST00000561187 PI3P19957 117 aa19.97■□□□□ 0.79
SNRPA1-215ENST00000561187 RCVRNP35243 200 aa19.97■□□□□ 0.79
SNRPA1-215ENST00000561187 MFAP4P55083 255 aa19.97■□□□□ 0.79
SNRPA1-215ENST00000561187 GALNT14Q96FL9 552 aa19.97■□□□□ 0.79
SNRPA1-215ENST00000561187 MAP6D1Q9H9H5 199 aa19.97■□□□□ 0.79
SNRPA1-215ENST00000561187 KMT2AQ03164 3969 aa19.96■□□□□ 0.79
SNRPA1-215ENST00000561187 KIR2DL5BA0A0G2JN68 375 aa19.96■□□□□ 0.79
SNRPA1-215ENST00000561187 KIR2DL5BA0A0G2JPC4 375 aa19.96■□□□□ 0.79
SNRPA1-215ENST00000561187 ELK1P19419 428 aa19.96■□□□□ 0.79
SNRPA1-215ENST00000561187 PRCDQ00LT1 54 aa19.96■□□□□ 0.79
SNRPA1-215ENST00000561187 LPCAT3Q6P1A2 487 aa19.96■□□□□ 0.79
SNRPA1-215ENST00000561187 KIR2DL5AQ8N109 375 aa19.96■□□□□ 0.79
SNRPA1-215ENST00000561187 CADM3Q8N126 398 aa19.96■□□□□ 0.79
SNRPA1-215ENST00000561187 KIR2DL5BQ8NHK3 375 aa19.96■□□□□ 0.79
SNRPA1-215ENST00000561187 FRAS1Q86XX4 4008 aa19.95■□□□□ 0.78
SNRPA1-215ENST00000561187 IGHV3-66A0A0C4DH42 116 aa19.95■□□□□ 0.78
SNRPA1-215ENST00000561187 GNG7O60262 68 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms