RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 FANCD2OSQ96PS1 177 aa12.12□□□□□ -0.47
LMX1B-204ENST00000561065 ATP6V0BQ99437 205 aa12.12□□□□□ -0.47
LMX1B-204ENST00000561065 LYSTQ99698 3801 aa12.12□□□□□ -0.47
LMX1B-204ENST00000561065 TMEM14BQ9NUH8 114 aa12.12□□□□□ -0.47
LMX1B-204ENST00000561065 SIGLEC8Q9NYZ4 499 aa12.12□□□□□ -0.47
LMX1B-204ENST00000561065 IGLC7A0M8Q6 106 aa12.11□□□□□ -0.47
LMX1B-204ENST00000561065 C15orf61A6NNL5 157 aa12.11□□□□□ -0.47
LMX1B-204ENST00000561065 PPP5D1E7EU14 171 aa12.11□□□□□ -0.47
LMX1B-204ENST00000561065 HSPE1P61604 102 aaKnown RBP12.11□□□□□ -0.47
LMX1B-204ENST00000561065 FAM219AQ8IW50 185 aa12.11□□□□□ -0.47
LMX1B-204ENST00000561065 SGPP2Q8IWX5 399 aa12.11□□□□□ -0.47
LMX1B-204ENST00000561065 OR4D10Q8NGI6 311 aa12.11□□□□□ -0.47
LMX1B-204ENST00000561065 OR13C8Q8NGS7 320 aa12.11□□□□□ -0.47
LMX1B-204ENST00000561065 CCDC140Q96MF4 163 aa12.11□□□□□ -0.47
LMX1B-204ENST00000561065 SOSTQ9BQB4 213 aa12.11□□□□□ -0.47
LMX1B-204ENST00000561065 MCUBQ9NWR8 336 aa12.11□□□□□ -0.47
LMX1B-204ENST00000561065 IGLV11-55A0A075B6I3 123 aa12.11□□□□□ -0.47
LMX1B-204ENST00000561065 HLA-AP01891 365 aaKnown RBP12.11□□□□□ -0.47
LMX1B-204ENST00000561065 REG1AP05451 166 aa12.11□□□□□ -0.47
LMX1B-204ENST00000561065 PI3P19957 117 aa12.11□□□□□ -0.47
LMX1B-204ENST00000561065 ARL3P36405 182 aa12.11□□□□□ -0.47
LMX1B-204ENST00000561065 INPP1P49441 399 aa12.11□□□□□ -0.47
LMX1B-204ENST00000561065 SUB1P53999 127 aaKnown RBP eCLIP12.11□□□□□ -0.47
LMX1B-204ENST00000561065 GPHB5Q86YW7 130 aa12.11□□□□□ -0.47
LMX1B-204ENST00000561065 Q8N402 240 aa12.11□□□□□ -0.47
LMX1B-204ENST00000561065 TOMM5Q8N4H5 51 aa12.11□□□□□ -0.47
LMX1B-204ENST00000561065 OR4C16Q8NGL9 310 aa12.11□□□□□ -0.47
LMX1B-204ENST00000561065 OR2K2Q8NGT1 345 aa12.11□□□□□ -0.47
LMX1B-204ENST00000561065 MRGPRFQ96AM1 343 aa12.11□□□□□ -0.47
LMX1B-204ENST00000561065 PALMDQ9NP74 551 aa12.11□□□□□ -0.47
LMX1B-204ENST00000561065 ENY2Q9NPA8 101 aa12.11□□□□□ -0.47
LMX1B-204ENST00000561065 C19orf73Q9NVV2 129 aa12.11□□□□□ -0.47
LMX1B-204ENST00000561065 SLC2A8Q9NY64 477 aa12.11□□□□□ -0.47
LMX1B-204ENST00000561065 NSG2Q9Y328 171 aa12.11□□□□□ -0.47
LMX1B-204ENST00000561065 S4R3C0 116 aa12.11□□□□□ -0.47
LMX1B-204ENST00000561065 NDUFB8O95169 186 aa12.1□□□□□ -0.47
LMX1B-204ENST00000561065 IFNA17P01571 189 aa12.1□□□□□ -0.47
LMX1B-204ENST00000561065 IGHV3-23P01764 117 aa12.1□□□□□ -0.47
LMX1B-204ENST00000561065 CLEC3BP05452 202 aa12.1□□□□□ -0.47
LMX1B-204ENST00000561065 ANXA3P12429 323 aa12.1□□□□□ -0.47
LMX1B-204ENST00000561065 SNCAP37840 140 aa12.1□□□□□ -0.47
LMX1B-204ENST00000561065 LCN12Q6JVE5 192 aa12.1□□□□□ -0.47
LMX1B-204ENST00000561065 CLEC19AQ6UXS0 136 aa12.1□□□□□ -0.47
LMX1B-204ENST00000561065 OR10W1Q8NGF6 305 aa12.1□□□□□ -0.47
LMX1B-204ENST00000561065 OR51S1Q8NGJ8 323 aa12.1□□□□□ -0.47
LMX1B-204ENST00000561065 GPR132Q9UNW8 380 aa12.1□□□□□ -0.47
LMX1B-204ENST00000561065 F11RQ9Y624 299 aaKnown RBP12.1□□□□□ -0.47
LMX1B-204ENST00000561065 RYR2Q92736 4967 aa12.09□□□□□ -0.47
LMX1B-204ENST00000561065 A8MZ25 164 aa12.09□□□□□ -0.47
LMX1B-204ENST00000561065 LGALS9O00182 355 aa12.09□□□□□ -0.47
LMX1B-204ENST00000561065 UCP1P25874 307 aa12.09□□□□□ -0.47
LMX1B-204ENST00000561065 PLET1Q6UQ28 207 aa12.09□□□□□ -0.47
LMX1B-204ENST00000561065 OR1P1Q8NH06 330 aa12.09□□□□□ -0.47
LMX1B-204ENST00000561065 TP53RKQ96S44 253 aa12.09□□□□□ -0.47
LMX1B-204ENST00000561065 TM2D3Q9BRN9 247 aa12.09□□□□□ -0.47
LMX1B-204ENST00000561065 TMEM222Q9H0R3 208 aa12.09□□□□□ -0.47
LMX1B-204ENST00000561065 PLEKHA3Q9HB20 300 aa12.09□□□□□ -0.47
LMX1B-204ENST00000561065 ZNF320A2RRD8 509 aa12.08□□□□□ -0.48
LMX1B-204ENST00000561065 CDS2O95674 445 aa12.08□□□□□ -0.48
LMX1B-204ENST00000561065 SRPXP78539 464 aa12.08□□□□□ -0.48
LMX1B-204ENST00000561065 PRCDQ00LT1 54 aa12.08□□□□□ -0.48
LMX1B-204ENST00000561065 SPSB3Q6PJ21 355 aa12.08□□□□□ -0.48
LMX1B-204ENST00000561065 SLC35G3Q8N808 338 aa12.08□□□□□ -0.48
LMX1B-204ENST00000561065 RBPMSQ93062 196 aaKnown RBP12.08□□□□□ -0.48
LMX1B-204ENST00000561065 RTBDNQ9BSG5 229 aaPredicted RBP12.08□□□□□ -0.48
LMX1B-204ENST00000561065 NAA60Q9H7X0 242 aa12.08□□□□□ -0.48
LMX1B-204ENST00000561065 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.08□□□□□ -0.48
LMX1B-204ENST00000561065 TECRQ9NZ01 308 aaKnown RBP12.08□□□□□ -0.48
LMX1B-204ENST00000561065 MFSD2BA6NFX1 497 aa12.07□□□□□ -0.48
LMX1B-204ENST00000561065 OR2C1O95371 312 aa12.07□□□□□ -0.48
LMX1B-204ENST00000561065 ETV6P41212 452 aa12.07□□□□□ -0.48
LMX1B-204ENST00000561065 WT1-ASQ06250 92 aa12.07□□□□□ -0.48
LMX1B-204ENST00000561065 SP6Q3SY56 376 aa12.07□□□□□ -0.48
LMX1B-204ENST00000561065 CD300EQ496F6 205 aaPredicted RBP12.07□□□□□ -0.48
LMX1B-204ENST00000561065 GTSCR1Q86UQ5 136 aa12.07□□□□□ -0.48
LMX1B-204ENST00000561065 DYNLRB2Q8TF09 96 aa12.07□□□□□ -0.48
LMX1B-204ENST00000561065 CACNG8Q8WXS5 425 aa12.07□□□□□ -0.48
LMX1B-204ENST00000561065 MARC2Q969Z3 335 aa12.07□□□□□ -0.48
LMX1B-204ENST00000561065 BSCL2Q96G97 398 aaPredicted RBP12.07□□□□□ -0.48
LMX1B-204ENST00000561065 TXN2Q99757 166 aa12.07□□□□□ -0.48
LMX1B-204ENST00000561065 SLC25A21Q9BQT8 299 aaPredicted RBP12.07□□□□□ -0.48
LMX1B-204ENST00000561065 RBM38Q9H0Z9 239 aaKnown RBP12.07□□□□□ -0.48
LMX1B-204ENST00000561065 CRYM-AS1A6NIL9 109 aa12.06□□□□□ -0.48
LMX1B-204ENST00000561065 C2orf70A6NJV1 201 aa12.06□□□□□ -0.48
LMX1B-204ENST00000561065 CORTO00230 105 aa12.06□□□□□ -0.48
LMX1B-204ENST00000561065 SCGB2A1O75556 95 aa12.06□□□□□ -0.48
LMX1B-204ENST00000561065 IGKV1-39P01597 117 aa12.06□□□□□ -0.48
LMX1B-204ENST00000561065 IGKV1D-39P04432 117 aa12.06□□□□□ -0.48
LMX1B-204ENST00000561065 FAAP20Q6NZ36 180 aa12.06□□□□□ -0.48
LMX1B-204ENST00000561065 OR2C3Q8N628 320 aa12.06□□□□□ -0.48
LMX1B-204ENST00000561065 ZNF502Q8TBZ5 544 aa12.06□□□□□ -0.48
LMX1B-204ENST00000561065 GLYATL2Q8WU03 294 aa12.06□□□□□ -0.48
LMX1B-204ENST00000561065 IL22RA2Q969J5 263 aa12.06□□□□□ -0.48
LMX1B-204ENST00000561065 C5orf66Q9H5L9 145 aa12.06□□□□□ -0.48
LMX1B-204ENST00000561065 C21orf62Q9NYP8 219 aa12.06□□□□□ -0.48
LMX1B-204ENST00000561065 UFC1Q9Y3C8 167 aa12.06□□□□□ -0.48
LMX1B-204ENST00000561065 SELENOKQ9Y6D0 94 aa12.06□□□□□ -0.48
LMX1B-204ENST00000561065 CENPXA8MT69 81 aa12.05□□□□□ -0.48
LMX1B-204ENST00000561065 OR5AC1P0C628 307 aa12.05□□□□□ -0.48
LMX1B-204ENST00000561065 MFAP4P55083 255 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms