RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 DEFA3P59666 94 aa7.45□□□□□ -1.22
RABGGTA-221ENST00000561055 SPCS3P61009 180 aa7.45□□□□□ -1.22
RABGGTA-221ENST00000561055 FAM209BQ5JX69 171 aa7.45□□□□□ -1.22
RABGGTA-221ENST00000561055 PVRIGQ6DKI7 326 aa7.45□□□□□ -1.22
RABGGTA-221ENST00000561055 RNASE11Q8TAA1 199 aaKnown RBP7.45□□□□□ -1.22
RABGGTA-221ENST00000561055 CASTOR1Q8WTX7 329 aa7.45□□□□□ -1.22
RABGGTA-221ENST00000561055 MITD1Q8WV92 249 aa7.45□□□□□ -1.22
RABGGTA-221ENST00000561055 RAX2Q96IS3 184 aa7.45□□□□□ -1.22
RABGGTA-221ENST00000561055 ZNF355PQ9NSJ1 428 aa7.45□□□□□ -1.22
RABGGTA-221ENST00000561055 NUDT15Q9NV35 164 aa7.45□□□□□ -1.22
RABGGTA-221ENST00000561055 DMRT1Q9Y5R6 373 aa7.45□□□□□ -1.22
RABGGTA-221ENST00000561055 F11RQ9Y624 299 aaKnown RBP7.45□□□□□ -1.22
RABGGTA-221ENST00000561055 NOTCH3Q9UM47 2321 aa7.45□□□□□ -1.22
RABGGTA-221ENST00000561055 C13orf42A0A1B0GVH6 325 aa7.44□□□□□ -1.22
RABGGTA-221ENST00000561055 CYB5BO43169 146 aa7.44□□□□□ -1.22
RABGGTA-221ENST00000561055 HSPB1P04792 205 aaKnown RBP7.44□□□□□ -1.22
RABGGTA-221ENST00000561055 IL5P05113 134 aa7.44□□□□□ -1.22
RABGGTA-221ENST00000561055 H2AFB2P0C5Z0 115 aa7.44□□□□□ -1.22
RABGGTA-221ENST00000561055 RHOGP84095 191 aa7.44□□□□□ -1.22
RABGGTA-221ENST00000561055 SMCO1Q147U7 214 aa7.44□□□□□ -1.22
RABGGTA-221ENST00000561055 BSXQ3C1V8 233 aa7.44□□□□□ -1.22
RABGGTA-221ENST00000561055 LINC00482Q8N8I6 264 aa7.44□□□□□ -1.22
RABGGTA-221ENST00000561055 OR1P1Q8NH06 330 aa7.44□□□□□ -1.22
RABGGTA-221ENST00000561055 COQ8AQ8NI60 647 aa7.44□□□□□ -1.22
RABGGTA-221ENST00000561055 ATP6V0BQ99437 205 aa7.44□□□□□ -1.22
RABGGTA-221ENST00000561055 MARVELD1Q9BSK0 173 aa7.44□□□□□ -1.22
RABGGTA-221ENST00000561055 PDCD10Q9BUL8 212 aa7.44□□□□□ -1.22
RABGGTA-221ENST00000561055 HINT2Q9BX68 163 aa7.44□□□□□ -1.22
RABGGTA-221ENST00000561055 PALMDQ9NP74 551 aa7.44□□□□□ -1.22
RABGGTA-221ENST00000561055 THYN1Q9P016 225 aa7.44□□□□□ -1.22
RABGGTA-221ENST00000561055 HSPB7Q9UBY9 170 aa7.44□□□□□ -1.22
RABGGTA-221ENST00000561055 CACNG5Q9UF02 275 aa7.44□□□□□ -1.22
RABGGTA-221ENST00000561055 MEGF8Q7Z7M0 2845 aa7.43□□□□□ -1.22
RABGGTA-221ENST00000561055 MGAM2Q2M2H8 2515 aa7.43□□□□□ -1.22
RABGGTA-221ENST00000561055 TRAV6A0A075B6T7 132 aa7.43□□□□□ -1.22
RABGGTA-221ENST00000561055 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.43□□□□□ -1.22
RABGGTA-221ENST00000561055 FAM90A26D6RGX4 464 aa7.43□□□□□ -1.22
RABGGTA-221ENST00000561055 NDUFB8O95169 186 aa7.43□□□□□ -1.22
RABGGTA-221ENST00000561055 IFNA17P01571 189 aa7.43□□□□□ -1.22
RABGGTA-221ENST00000561055 PF4P02776 101 aa7.43□□□□□ -1.22
RABGGTA-221ENST00000561055 PRH1P02810 166 aa7.43□□□□□ -1.22
RABGGTA-221ENST00000561055 REG1AP05451 166 aa7.43□□□□□ -1.22
RABGGTA-221ENST00000561055 DEFA4P12838 97 aa7.43□□□□□ -1.22
RABGGTA-221ENST00000561055 MFAP2P55001 183 aa7.43□□□□□ -1.22
RABGGTA-221ENST00000561055 ERHP84090 104 aaKnown RBP7.43□□□□□ -1.22
RABGGTA-221ENST00000561055 ATP5G2Q06055 141 aa7.43□□□□□ -1.22
RABGGTA-221ENST00000561055 ZNF616Q08AN1 781 aa7.43□□□□□ -1.22
RABGGTA-221ENST00000561055 C15orf32Q32M92 178 aa7.43□□□□□ -1.22
RABGGTA-221ENST00000561055 C4orf46Q504U0 113 aa7.43□□□□□ -1.22
RABGGTA-221ENST00000561055 NRARPQ7Z6K4 114 aa7.43□□□□□ -1.22
RABGGTA-221ENST00000561055 OR11H1Q8NG94 326 aa7.43□□□□□ -1.22
RABGGTA-221ENST00000561055 OR1N2Q8NGR9 330 aa7.43□□□□□ -1.22
RABGGTA-221ENST00000561055 ENKURQ8TC29 256 aa7.43□□□□□ -1.22
RABGGTA-221ENST00000561055 VN1R17PQ8TDU5 208 aa7.43□□□□□ -1.22
RABGGTA-221ENST00000561055 CXorf58Q96LI9 332 aa7.43□□□□□ -1.22
RABGGTA-221ENST00000561055 PLEKHA3Q9HB20 300 aa7.43□□□□□ -1.22
RABGGTA-221ENST00000561055 RANGRFQ9HD47 186 aaPredicted RBP7.43□□□□□ -1.22
RABGGTA-221ENST00000561055 FBXL7Q9UJT9 491 aa7.43□□□□□ -1.22
RABGGTA-221ENST00000561055 TRBV7-1A0A0A6YYK4 115 aa7.42□□□□□ -1.22
RABGGTA-221ENST00000561055 LINC01619G3V211 115 aa7.42□□□□□ -1.22
RABGGTA-221ENST00000561055 OR2J3O76001 311 aa7.42□□□□□ -1.22
RABGGTA-221ENST00000561055 IGHV3-11P01762 117 aa7.42□□□□□ -1.22
RABGGTA-221ENST00000561055 OR8U8P0C7N1 319 aa7.42□□□□□ -1.22
RABGGTA-221ENST00000561055 TNFRSF9Q07011 255 aa7.42□□□□□ -1.22
RABGGTA-221ENST00000561055 DEFB136Q30KP8 78 aa7.42□□□□□ -1.22
RABGGTA-221ENST00000561055 GGNBP1Q5YKI7 109 aa7.42□□□□□ -1.22
RABGGTA-221ENST00000561055 C19orf35Q6ZS72 473 aa7.42□□□□□ -1.22
RABGGTA-221ENST00000561055 OR52B4Q8NGK2 314 aa7.42□□□□□ -1.22
RABGGTA-221ENST00000561055 ZNF431Q8TF32 576 aaPredicted RBP7.42□□□□□ -1.22
RABGGTA-221ENST00000561055 PEF1Q9UBV8 284 aaKnown RBP7.42□□□□□ -1.22
RABGGTA-221ENST00000561055 SORL1Q92673 2214 aa7.42□□□□□ -1.22
RABGGTA-221ENST00000561055 IGHV4OR15-8A0A075B7B6 117 aa7.41□□□□□ -1.22
RABGGTA-221ENST00000561055 A0A087WW49 117 aa7.41□□□□□ -1.22
RABGGTA-221ENST00000561055 SNRPGP15A8MWD9 76 aa7.41□□□□□ -1.22
RABGGTA-221ENST00000561055 CORTO00230 105 aa7.41□□□□□ -1.22
RABGGTA-221ENST00000561055 PRAF2O60831 178 aa7.41□□□□□ -1.22
RABGGTA-221ENST00000561055 IFNA21P01568 189 aa7.41□□□□□ -1.22
RABGGTA-221ENST00000561055 HOXB5P09067 269 aa7.41□□□□□ -1.22
RABGGTA-221ENST00000561055 RNASE2P10153 161 aaKnown RBP7.41□□□□□ -1.22
RABGGTA-221ENST00000561055 FCGR2BP31994 310 aaPredicted RBP7.41□□□□□ -1.22
RABGGTA-221ENST00000561055 SNCAP37840 140 aa7.41□□□□□ -1.22
RABGGTA-221ENST00000561055 SUB1P53999 127 aaKnown RBP eCLIP7.41□□□□□ -1.22
RABGGTA-221ENST00000561055 ATP5IP56385 69 aaPredicted RBP7.41□□□□□ -1.22
RABGGTA-221ENST00000561055 ID3Q02535 119 aa7.41□□□□□ -1.22
RABGGTA-221ENST00000561055 EXOSC2Q13868 293 aaKnown RBP7.41□□□□□ -1.22
RABGGTA-221ENST00000561055 C2orf83Q53S99 150 aa7.41□□□□□ -1.22
RABGGTA-221ENST00000561055 SLC25A24Q6NUK1 477 aa7.41□□□□□ -1.22
RABGGTA-221ENST00000561055 PLET1Q6UQ28 207 aa7.41□□□□□ -1.22
RABGGTA-221ENST00000561055 DPF1Q92782 380 aa7.41□□□□□ -1.22
RABGGTA-221ENST00000561055 RCC1LQ96I51 464 aaKnown RBP7.41□□□□□ -1.22
RABGGTA-221ENST00000561055 DUX3Q96PT4 197 aa7.41□□□□□ -1.22
RABGGTA-221ENST00000561055 OR5B12Q96R08 314 aa7.41□□□□□ -1.22
RABGGTA-221ENST00000561055 INMT-MINDY4F8WBC2 141 aa7.4□□□□□ -1.22
RABGGTA-221ENST00000561055 I3L2K1 104 aa7.4□□□□□ -1.22
RABGGTA-221ENST00000561055 K7EIM0 57 aa7.4□□□□□ -1.22
RABGGTA-221ENST00000561055 WIPF1O43516 503 aa7.4□□□□□ -1.22
RABGGTA-221ENST00000561055 ADAP1O75689 374 aa7.4□□□□□ -1.22
RABGGTA-221ENST00000561055 LY86O95711 162 aa7.4□□□□□ -1.22
RABGGTA-221ENST00000561055 PTTG1O95997 202 aa7.4□□□□□ -1.22
RABGGTA-221ENST00000561055 CD33P20138 364 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms