RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 MGLLQ99685 303 aa13.45□□□□□ -0.26
TPM1-226ENST00000560959 COMMD9Q9P000 198 aa13.45□□□□□ -0.26
TPM1-226ENST00000560959 TPRKBQ9Y3C4 175 aa13.45□□□□□ -0.26
TPM1-226ENST00000560959 SULT1C2O00338 296 aa13.44□□□□□ -0.26
TPM1-226ENST00000560959 RAB3BP20337 219 aa13.44□□□□□ -0.26
TPM1-226ENST00000560959 ARPC4P59998 168 aa13.44□□□□□ -0.26
TPM1-226ENST00000560959 OGFRL1Q5TC84 451 aaPredicted RBP13.44□□□□□ -0.26
TPM1-226ENST00000560959 Q6ZTC4 211 aa13.44□□□□□ -0.26
TPM1-226ENST00000560959 UBAC2Q8NBM4 344 aa13.44□□□□□ -0.26
TPM1-226ENST00000560959 NUDCD2Q8WVJ2 157 aa13.44□□□□□ -0.26
TPM1-226ENST00000560959 TXN2Q99757 166 aa13.44□□□□□ -0.26
TPM1-226ENST00000560959 IGHV3-21A0A0B4J1V1 117 aa13.43□□□□□ -0.26
TPM1-226ENST00000560959 IGHV4-28A0A0C4DH34 117 aa13.43□□□□□ -0.26
TPM1-226ENST00000560959 TMEM235A6NFC5 223 aa13.43□□□□□ -0.26
TPM1-226ENST00000560959 ZNF705EA8MWA4 302 aaPredicted RBP13.43□□□□□ -0.26
TPM1-226ENST00000560959 AMBPP02760 352 aa13.43□□□□□ -0.26
TPM1-226ENST00000560959 MYL9P24844 172 aa13.43□□□□□ -0.26
TPM1-226ENST00000560959 FCGR2CP31995 323 aa13.43□□□□□ -0.26
TPM1-226ENST00000560959 GNG2P59768 71 aa13.43□□□□□ -0.26
TPM1-226ENST00000560959 GBGT1Q8N5D6 347 aa13.43□□□□□ -0.26
TPM1-226ENST00000560959 OR13F1Q8NGS4 319 aa13.43□□□□□ -0.26
TPM1-226ENST00000560959 IGKV3-7A0A075B6H7 116 aa13.42□□□□□ -0.26
TPM1-226ENST00000560959 CASQ2O14958 399 aaPredicted RBP13.42□□□□□ -0.26
TPM1-226ENST00000560959 RGS10O43665 173 aa13.42□□□□□ -0.26
TPM1-226ENST00000560959 SSX5O60225 188 aa13.42□□□□□ -0.26
TPM1-226ENST00000560959 YIF1AO95070 293 aa13.42□□□□□ -0.26
TPM1-226ENST00000560959 PPYP01298 95 aa13.42□□□□□ -0.26
TPM1-226ENST00000560959 GIG44P09565 113 aaPredicted RBP13.42□□□□□ -0.26
TPM1-226ENST00000560959 TCF24Q7RTU0 167 aa13.42□□□□□ -0.26
TPM1-226ENST00000560959 STHQ8IWL8 128 aa13.42□□□□□ -0.26
TPM1-226ENST00000560959 DUSP18Q8NEJ0 188 aa13.42□□□□□ -0.26
TPM1-226ENST00000560959 OR1P1Q8NH06 330 aa13.42□□□□□ -0.26
TPM1-226ENST00000560959 GIMAP1Q8WWP7 306 aa13.42□□□□□ -0.26
TPM1-226ENST00000560959 KRTAP4-5Q9BYR2 181 aa13.42□□□□□ -0.26
TPM1-226ENST00000560959 NXF2Q9GZY0 626 aaKnown RBP13.42□□□□□ -0.26
TPM1-226ENST00000560959 VSIRQ9H7M9 311 aa13.42□□□□□ -0.26
TPM1-226ENST00000560959 MFAP4P55083 255 aa13.41□□□□□ -0.26
TPM1-226ENST00000560959 DEFB131AP59861 70 aa13.41□□□□□ -0.26
TPM1-226ENST00000560959 MORN3Q6PF18 240 aaPredicted RBP13.41□□□□□ -0.26
TPM1-226ENST00000560959 TMEM56Q96MV1 263 aa13.41□□□□□ -0.26
TPM1-226ENST00000560959 SLC5A7Q9GZV3 580 aa13.41□□□□□ -0.26
TPM1-226ENST00000560959 MS4A6AQ9H2W1 248 aa13.41□□□□□ -0.26
TPM1-226ENST00000560959 ELOA3CA0A087WX78 387 aaPredicted RBP13.4□□□□□ -0.26
TPM1-226ENST00000560959 IGHV3-49A0A0A0MS15 119 aa13.4□□□□□ -0.26
TPM1-226ENST00000560959 DNASE2O00115 360 aaPredicted RBP13.4□□□□□ -0.26
TPM1-226ENST00000560959 EIF4EP06730 217 aaKnown RBP13.4□□□□□ -0.26
TPM1-226ENST00000560959 SPP1P10451 314 aa13.4□□□□□ -0.26
TPM1-226ENST00000560959 ERVK-16P61578 105 aa13.4□□□□□ -0.26
TPM1-226ENST00000560959 PRSS48Q7RTY5 328 aa13.4□□□□□ -0.26
TPM1-226ENST00000560959 BEST4Q8NFU0 473 aa13.4□□□□□ -0.26
TPM1-226ENST00000560959 BORCS5Q969J3 196 aa13.4□□□□□ -0.26
TPM1-226ENST00000560959 GINS3Q9BRX5 216 aa13.4□□□□□ -0.26
TPM1-226ENST00000560959 VCXQ9H320 206 aa13.4□□□□□ -0.26
TPM1-226ENST00000560959 FKBP11Q9NYL4 201 aa13.4□□□□□ -0.26
TPM1-226ENST00000560959 HSPG2P98160 4391 aa13.4□□□□□ -0.26
TPM1-226ENST00000560959 TRDV1A0A1B0GX56 115 aa13.39□□□□□ -0.27
TPM1-226ENST00000560959 MARCH11A6NNE9 402 aa13.39□□□□□ -0.27
TPM1-226ENST00000560959 LEMD1Q68G75 181 aa13.39□□□□□ -0.27
TPM1-226ENST00000560959 ZNF818PQ6ZRF7 136 aa13.39□□□□□ -0.27
TPM1-226ENST00000560959 TRPT1Q86TN4 253 aaKnown RBP13.39□□□□□ -0.27
TPM1-226ENST00000560959 NDUFAF3Q9BU61 184 aa13.39□□□□□ -0.27
TPM1-226ENST00000560959 OR51B2Q9Y5P1 312 aa13.39□□□□□ -0.27
TPM1-226ENST00000560959 X6R8D5 127 aa13.39□□□□□ -0.27
TPM1-226ENST00000560959 DEFB131BA0A096LNP1 70 aa13.38□□□□□ -0.27
TPM1-226ENST00000560959 I3L2K1 104 aa13.38□□□□□ -0.27
TPM1-226ENST00000560959 ST8SIA3O43173 380 aa13.38□□□□□ -0.27
TPM1-226ENST00000560959 AADACL3Q5VUY0 350 aa13.38□□□□□ -0.27
TPM1-226ENST00000560959 HOGA1Q86XE5 327 aa13.38□□□□□ -0.27
TPM1-226ENST00000560959 OR51H1Q8NH63 302 aa13.38□□□□□ -0.27
TPM1-226ENST00000560959 HINT2Q9BX68 163 aa13.38□□□□□ -0.27
TPM1-226ENST00000560959 PRNDQ9UKY0 176 aa13.38□□□□□ -0.27
TPM1-226ENST00000560959 IGHV3OR16-13A0A075B7E8 117 aa13.37□□□□□ -0.27
TPM1-226ENST00000560959 IGHV3-74A0A0B4J1X5 117 aa13.37□□□□□ -0.27
TPM1-226ENST00000560959 NOTOA8MTQ0 251 aa13.37□□□□□ -0.27
TPM1-226ENST00000560959 SNAPC5O75971 98 aa13.37□□□□□ -0.27
TPM1-226ENST00000560959 F2RP25116 425 aa13.37□□□□□ -0.27
TPM1-226ENST00000560959 LILRB2Q8N423 598 aa13.37□□□□□ -0.27
TPM1-226ENST00000560959 ST8SIA2Q92186 375 aa13.37□□□□□ -0.27
TPM1-226ENST00000560959 SLC25A46Q96AG3 418 aa13.37□□□□□ -0.27
TPM1-226ENST00000560959 M0R2N4 97 aa13.36□□□□□ -0.27
TPM1-226ENST00000560959 C12orf74Q32Q52 190 aa13.36□□□□□ -0.27
TPM1-226ENST00000560959 TOMM20LQ6UXN7 152 aa13.36□□□□□ -0.27
TPM1-226ENST00000560959 CSNK1G2-AS1Q8NCQ2 148 aa13.36□□□□□ -0.27
TPM1-226ENST00000560959 GRAMD2BQ96HH9 432 aa13.36□□□□□ -0.27
TPM1-226ENST00000560959 NDUFB11Q9NX14 153 aa13.36□□□□□ -0.27
TPM1-226ENST00000560959 TBC1D24Q9ULP9 559 aa13.36□□□□□ -0.27
TPM1-226ENST00000560959 PTHLHP12272 177 aa13.35□□□□□ -0.27
TPM1-226ENST00000560959 GNRHRP30968 328 aa13.35□□□□□ -0.27
TPM1-226ENST00000560959 FXYD4P59646 89 aa13.35□□□□□ -0.27
TPM1-226ENST00000560959 TBCEQ15813 527 aaPredicted RBP13.35□□□□□ -0.27
TPM1-226ENST00000560959 Q6ZR54 194 aa13.35□□□□□ -0.27
TPM1-226ENST00000560959 ZNF367Q7RTV3 350 aa13.35□□□□□ -0.27
TPM1-226ENST00000560959 FAM24BQ8N5W8 94 aa13.35□□□□□ -0.27
TPM1-226ENST00000560959 ZNF114Q8NC26 417 aa13.35□□□□□ -0.27
TPM1-226ENST00000560959 TSC22D3Q99576 134 aa13.35□□□□□ -0.27
TPM1-226ENST00000560959 TMEM231Q9H6L2 316 aa13.35□□□□□ -0.27
TPM1-226ENST00000560959 TMEM14BQ9NUH8 114 aa13.35□□□□□ -0.27
TPM1-226ENST00000560959 PLA2G2EQ9NZK7 142 aa13.35□□□□□ -0.27
TPM1-226ENST00000560959 GNG7O60262 68 aa13.34□□□□□ -0.27
TPM1-226ENST00000560959 MT-CO2P00403 227 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms