RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 TMUB2Q71RG4 321 aa7.42□□□□□ -1.22
TPM1-225ENST00000560679 BVESQ8NE79 360 aa7.42□□□□□ -1.22
TPM1-225ENST00000560679 OR5T1Q8NG75 326 aa7.42□□□□□ -1.22
TPM1-225ENST00000560679 COQ8AQ8NI60 647 aa7.42□□□□□ -1.22
TPM1-225ENST00000560679 RTBDNQ9BSG5 229 aaPredicted RBP7.42□□□□□ -1.22
TPM1-225ENST00000560679 PDCD10Q9BUL8 212 aa7.42□□□□□ -1.22
TPM1-225ENST00000560679 PARP12Q9H0J9 701 aaKnown RBP7.42□□□□□ -1.22
TPM1-225ENST00000560679 ZNF355PQ9NSJ1 428 aa7.42□□□□□ -1.22
TPM1-225ENST00000560679 METTL1Q9UBP6 276 aaKnown RBP7.42□□□□□ -1.22
TPM1-225ENST00000560679 C14orf166Q9Y224 244 aaKnown RBP7.42□□□□□ -1.22
TPM1-225ENST00000560679 A0A0G2JLM5 398 aa7.41□□□□□ -1.22
TPM1-225ENST00000560679 BMPR1BO00238 502 aa7.41□□□□□ -1.22
TPM1-225ENST00000560679 ARPC5O15511 151 aa7.41□□□□□ -1.22
TPM1-225ENST00000560679 YPEL1O60688 119 aa7.41□□□□□ -1.22
TPM1-225ENST00000560679 S100A11P31949 105 aa7.41□□□□□ -1.22
TPM1-225ENST00000560679 HTD2P86397 168 aa7.41□□□□□ -1.22
TPM1-225ENST00000560679 EXOSC2Q13868 293 aaKnown RBP7.41□□□□□ -1.22
TPM1-225ENST00000560679 DEFB114Q30KQ6 69 aa7.41□□□□□ -1.22
TPM1-225ENST00000560679 GSG1LQ6UXU4 331 aa7.41□□□□□ -1.22
TPM1-225ENST00000560679 Q6ZS49 121 aa7.41□□□□□ -1.22
TPM1-225ENST00000560679 KCTD9Q7L273 389 aa7.41□□□□□ -1.22
TPM1-225ENST00000560679 OR5AN1Q8NGI8 311 aa7.41□□□□□ -1.22
TPM1-225ENST00000560679 MRPL30Q8TCC3 161 aaKnown RBP7.41□□□□□ -1.22
TPM1-225ENST00000560679 YPEL2Q96QA6 119 aa7.41□□□□□ -1.22
TPM1-225ENST00000560679 ZNF2Q9BSG1 426 aaPredicted RBP7.41□□□□□ -1.22
TPM1-225ENST00000560679 GGTLC1Q9BX51 225 aa7.41□□□□□ -1.22
TPM1-225ENST00000560679 SPACA1Q9HBV2 294 aa7.41□□□□□ -1.22
TPM1-225ENST00000560679 COMMD9Q9P000 198 aa7.41□□□□□ -1.22
TPM1-225ENST00000560679 UBQLN2Q9UHD9 624 aa7.41□□□□□ -1.22
TPM1-225ENST00000560679 KLK5Q9Y337 293 aaPredicted RBP7.41□□□□□ -1.22
TPM1-225ENST00000560679 WASHC3Q9Y3C0 194 aa7.41□□□□□ -1.22
TPM1-225ENST00000560679 MUC4Q99102 2169 aa7.4□□□□□ -1.22
TPM1-225ENST00000560679 LINC00862A6NCI5 91 aa7.4□□□□□ -1.22
TPM1-225ENST00000560679 FAM25EA8MYX2 175 aa7.4□□□□□ -1.22
TPM1-225ENST00000560679 B3GALNT1O75752 331 aa7.4□□□□□ -1.22
TPM1-225ENST00000560679 IGKV1-16P04430 117 aa7.4□□□□□ -1.22
TPM1-225ENST00000560679 GLAP06280 429 aa7.4□□□□□ -1.22
TPM1-225ENST00000560679 PI3P19957 117 aa7.4□□□□□ -1.22
TPM1-225ENST00000560679 SUPT4H1P63272 117 aaKnown RBP7.4□□□□□ -1.22
TPM1-225ENST00000560679 CYCSP99999 105 aaKnown RBP7.4□□□□□ -1.22
TPM1-225ENST00000560679 PJVKQ0ZLH3 352 aa7.4□□□□□ -1.22
TPM1-225ENST00000560679 FXYD3Q14802 87 aa7.4□□□□□ -1.22
TPM1-225ENST00000560679 ANKRD55Q3KP44 614 aa7.4□□□□□ -1.22
TPM1-225ENST00000560679 DHRS11Q6UWP2 260 aa7.4□□□□□ -1.22
TPM1-225ENST00000560679 WFDC3Q8IUB2 231 aa7.4□□□□□ -1.22
TPM1-225ENST00000560679 KRTAP4-5Q9BYR2 181 aa7.4□□□□□ -1.22
TPM1-225ENST00000560679 MFFQ9GZY8 342 aa7.4□□□□□ -1.22
TPM1-225ENST00000560679 ARL6Q9H0F7 186 aa7.4□□□□□ -1.22
TPM1-225ENST00000560679 CHMP1AQ9HD42 196 aaPredicted RBP7.4□□□□□ -1.22
TPM1-225ENST00000560679 PEMTQ9UBM1 199 aa7.4□□□□□ -1.22
TPM1-225ENST00000560679 A0A0D9SG52 128 aa7.39□□□□□ -1.23
TPM1-225ENST00000560679 A0A1B0GVY2 172 aa7.39□□□□□ -1.23
TPM1-225ENST00000560679 RPS10-NUDT3A0A1W2PQS6 291 aa7.39□□□□□ -1.23
TPM1-225ENST00000560679 C5orf51A6NDU8 294 aa7.39□□□□□ -1.23
TPM1-225ENST00000560679 CRYM-AS1A6NIL9 109 aa7.39□□□□□ -1.23
TPM1-225ENST00000560679 H7C2Y5 167 aa7.39□□□□□ -1.23
TPM1-225ENST00000560679 SPDEFO95238 335 aa7.39□□□□□ -1.23
TPM1-225ENST00000560679 NAPSAO96009 420 aa7.39□□□□□ -1.23
TPM1-225ENST00000560679 CFDP00746 253 aaPredicted RBP7.39□□□□□ -1.23
TPM1-225ENST00000560679 ATF4P18848 351 aaPredicted RBP7.39□□□□□ -1.23
TPM1-225ENST00000560679 AADACP22760 399 aa7.39□□□□□ -1.23
TPM1-225ENST00000560679 UCP3P55916 312 aa7.39□□□□□ -1.23
TPM1-225ENST00000560679 LINC00205P59089 165 aa7.39□□□□□ -1.23
TPM1-225ENST00000560679 HERV-K104P61576 105 aa7.39□□□□□ -1.23
TPM1-225ENST00000560679 OR2F1Q13607 317 aa7.39□□□□□ -1.23
TPM1-225ENST00000560679 ZNF345Q14585 488 aa7.39□□□□□ -1.23
TPM1-225ENST00000560679 HMGN3Q15651 99 aa7.39□□□□□ -1.23
TPM1-225ENST00000560679 GUCA2BQ16661 112 aa7.39□□□□□ -1.23
TPM1-225ENST00000560679 CLLU1Q5K131 121 aa7.39□□□□□ -1.23
TPM1-225ENST00000560679 ZNF546Q86UE3 836 aa7.39□□□□□ -1.23
TPM1-225ENST00000560679 KCNRGQ8N5I3 272 aa7.39□□□□□ -1.23
TPM1-225ENST00000560679 DYNLRB2Q8TF09 96 aa7.39□□□□□ -1.23
TPM1-225ENST00000560679 PPP1R1CQ8WVI7 109 aa7.39□□□□□ -1.23
TPM1-225ENST00000560679 MOB3AQ96BX8 217 aa7.39□□□□□ -1.23
TPM1-225ENST00000560679 ABHD14BQ96IU4 210 aa7.39□□□□□ -1.23
TPM1-225ENST00000560679 SEC22AQ96IW7 307 aa7.39□□□□□ -1.23
TPM1-225ENST00000560679 NMES1Q9C002 83 aa7.39□□□□□ -1.23
TPM1-225ENST00000560679 RIMS4Q9H426 269 aaPredicted RBP7.39□□□□□ -1.23
TPM1-225ENST00000560679 RDH8Q9NYR8 311 aa7.39□□□□□ -1.23
TPM1-225ENST00000560679 TNFSF18Q9UNG2 199 aa7.39□□□□□ -1.23
TPM1-225ENST00000560679 SELENOKQ9Y6D0 94 aa7.39□□□□□ -1.23
TPM1-225ENST00000560679 LOC102724200A0A096LPH7 203 aaPredicted RBP7.38□□□□□ -1.23
TPM1-225ENST00000560679 TRBV6-6A0A0A6YYG2 114 aa7.38□□□□□ -1.23
TPM1-225ENST00000560679 C2orf70A6NJV1 201 aa7.38□□□□□ -1.23
TPM1-225ENST00000560679 RAB29O14966 203 aa7.38□□□□□ -1.23
TPM1-225ENST00000560679 BCL2L11O43521 198 aa7.38□□□□□ -1.23
TPM1-225ENST00000560679 PROP1O75360 226 aa7.38□□□□□ -1.23
TPM1-225ENST00000560679 NDUFB8O95169 186 aa7.38□□□□□ -1.23
TPM1-225ENST00000560679 PSMB6P28072 239 aa7.38□□□□□ -1.23
TPM1-225ENST00000560679 FCGR2CP31995 323 aa7.38□□□□□ -1.23
TPM1-225ENST00000560679 MC5RP33032 325 aa7.38□□□□□ -1.23
TPM1-225ENST00000560679 RAB14P61106 215 aa7.38□□□□□ -1.23
TPM1-225ENST00000560679 SLC51BQ86UW2 128 aa7.38□□□□□ -1.23
TPM1-225ENST00000560679 SLC38A6Q8IZM9 456 aa7.38□□□□□ -1.23
TPM1-225ENST00000560679 ZNF383Q8NA42 475 aa7.38□□□□□ -1.23
TPM1-225ENST00000560679 THAP6Q8TBB0 222 aa7.38□□□□□ -1.23
TPM1-225ENST00000560679 PHLDA1Q8WV24 401 aaPredicted RBP7.38□□□□□ -1.23
TPM1-225ENST00000560679 CACNG8Q8WXS5 425 aa7.38□□□□□ -1.23
TPM1-225ENST00000560679 USMG5Q96IX5 58 aa7.38□□□□□ -1.23
TPM1-225ENST00000560679 RNF5Q99942 180 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms