RNA–Protein interactions for RNA: ENST00000560527.1

USP8-211, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 4

Gene USP8, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-211ENST00000560527 SSX8Q7RTT4 187 aa1.17□□□□□ -2.22
USP8-211ENST00000560527 OR6V1Q8N148 313 aa1.17□□□□□ -2.22
USP8-211ENST00000560527 OR5B17Q8NGF7 314 aa1.17□□□□□ -2.22
USP8-211ENST00000560527 DCUN1D1Q96GG9 259 aa1.17□□□□□ -2.22
USP8-211ENST00000560527 PAIP2Q9BPZ3 127 aaKnown RBP1.17□□□□□ -2.22
USP8-211ENST00000560527 CHST6Q9GZX3 395 aa1.17□□□□□ -2.22
USP8-211ENST00000560527 TLNRD1Q9H1K6 362 aa1.17□□□□□ -2.22
USP8-211ENST00000560527 DCSTAMPQ9H295 470 aa1.17□□□□□ -2.22
USP8-211ENST00000560527 MRPL27Q9P0M9 148 aaKnown RBP1.17□□□□□ -2.22
USP8-211ENST00000560527 SMARCA4P51532 1647 aa1.16□□□□□ -2.22
USP8-211ENST00000560527 BAZ2BQ9UIF8 2168 aaKnown RBP1.16□□□□□ -2.22
USP8-211ENST00000560527 COL6A6A6NMZ7 2263 aa1.16□□□□□ -2.22
USP8-211ENST00000560527 A0A1B0GV50 99 aa1.16□□□□□ -2.22
USP8-211ENST00000560527 OR4C46A6NHA9 309 aa1.16□□□□□ -2.22
USP8-211ENST00000560527 HMSDA8MTL9 139 aa1.16□□□□□ -2.22
USP8-211ENST00000560527 ZNF737O75373 536 aa1.16□□□□□ -2.22
USP8-211ENST00000560527 SERPINA1P01009 418 aa1.16□□□□□ -2.22
USP8-211ENST00000560527 HLA-DRB1P01911 266 aa1.16□□□□□ -2.22
USP8-211ENST00000560527 DEFA4P12838 97 aa1.16□□□□□ -2.22
USP8-211ENST00000560527 KCNE1P15382 129 aa1.16□□□□□ -2.22
USP8-211ENST00000560527 S100A7P31151 101 aa1.16□□□□□ -2.22
USP8-211ENST00000560527 PPP1R2P41236 205 aa1.16□□□□□ -2.22
USP8-211ENST00000560527 AKR1C3P42330 323 aa1.16□□□□□ -2.22
USP8-211ENST00000560527 RPL28P46779 137 aaKnown RBP1.16□□□□□ -2.22
USP8-211ENST00000560527 PSME3P61289 254 aa1.16□□□□□ -2.22
USP8-211ENST00000560527 SNRPD2P62316 118 aaKnown RBP1.16□□□□□ -2.22
USP8-211ENST00000560527 CAV1Q03135 178 aa1.16□□□□□ -2.22
USP8-211ENST00000560527 TAF1AQ15573 450 aaPredicted RBP1.16□□□□□ -2.22
USP8-211ENST00000560527 GRK1Q15835 563 aa1.16□□□□□ -2.22
USP8-211ENST00000560527 PPP1R2P3Q6NXS1 205 aa1.16□□□□□ -2.22
USP8-211ENST00000560527 LPCAT3Q6P1A2 487 aa1.16□□□□□ -2.22
USP8-211ENST00000560527 C20orf196Q8IYI0 205 aa1.16□□□□□ -2.22
USP8-211ENST00000560527 RPP25LQ8N5L8 163 aaKnown RBP1.16□□□□□ -2.22
USP8-211ENST00000560527 TBC1D19Q8N5T2 526 aa1.16□□□□□ -2.22
USP8-211ENST00000560527 ANKRD29Q8N6D5 301 aa1.16□□□□□ -2.22
USP8-211ENST00000560527 ROPN1LQ96C74 230 aa1.16□□□□□ -2.22
USP8-211ENST00000560527 OR52E6Q96RD3 313 aa1.16□□□□□ -2.22
USP8-211ENST00000560527 ULBP3Q9BZM4 244 aa1.16□□□□□ -2.22
USP8-211ENST00000560527 OR8D2Q9GZM6 311 aa1.16□□□□□ -2.22
USP8-211ENST00000560527 C14orf105Q9NVL8 296 aa1.16□□□□□ -2.22
USP8-211ENST00000560527 IDI2-AS1Q9NZ38 188 aa1.16□□□□□ -2.22
USP8-211ENST00000560527 TP73-AS1Q9UF72 201 aa1.16□□□□□ -2.22
USP8-211ENST00000560527 FBXO5Q9UKT4 447 aa1.16□□□□□ -2.22
USP8-211ENST00000560527 FLG2Q5D862 2391 aaPredicted RBP1.16□□□□□ -2.22
USP8-211ENST00000560527 LAMB2P55268 1798 aa1.16□□□□□ -2.22
USP8-211ENST00000560527 INTS1Q8N201 2190 aaKnown RBP1.15□□□□□ -2.22
USP8-211ENST00000560527 TRBV20OR9-2A0A075B6H5 130 aa1.15□□□□□ -2.23
USP8-211ENST00000560527 IGKV1D-43A0A0B4J1Z2 117 aa1.15□□□□□ -2.23
USP8-211ENST00000560527 TRAV38-1A0A0B4J264 116 aa1.15□□□□□ -2.23
USP8-211ENST00000560527 TRAV26-2A0A0B4J265 109 aa1.15□□□□□ -2.23
USP8-211ENST00000560527 A0A0D9SEW6 157 aa1.15□□□□□ -2.23
USP8-211ENST00000560527 PQLC2LA1A4F0 135 aa1.15□□□□□ -2.23
USP8-211ENST00000560527 LEPROTO15243 131 aa1.15□□□□□ -2.23
USP8-211ENST00000560527 HAND1O96004 215 aa1.15□□□□□ -2.23
USP8-211ENST00000560527 TTRP02766 147 aa1.15□□□□□ -2.23
USP8-211ENST00000560527 MSMBP08118 114 aa1.15□□□□□ -2.23
USP8-211ENST00000560527 SRP19P09132 144 aaKnown RBP1.15□□□□□ -2.23
USP8-211ENST00000560527 GPX2P18283 190 aa1.15□□□□□ -2.23
USP8-211ENST00000560527 HLA-DMBP28068 263 aa1.15□□□□□ -2.23
USP8-211ENST00000560527 CSN1S1P47710 185 aa1.15□□□□□ -2.23
USP8-211ENST00000560527 MRPS25P82663 173 aaKnown RBP1.15□□□□□ -2.23
USP8-211ENST00000560527 EDDM3AQ14507 147 aa1.15□□□□□ -2.23
USP8-211ENST00000560527 CDK10Q15131 360 aa1.15□□□□□ -2.23
USP8-211ENST00000560527 TMEM155Q4W5P6 130 aa1.15□□□□□ -2.23
USP8-211ENST00000560527 C9orf64Q5T6V5 341 aa1.15□□□□□ -2.23
USP8-211ENST00000560527 GLT8D1Q68CQ7 371 aa1.15□□□□□ -2.23
USP8-211ENST00000560527 Q6ZS49 121 aa1.15□□□□□ -2.23
USP8-211ENST00000560527 HSPB9Q9BQS6 159 aa1.15□□□□□ -2.23
USP8-211ENST00000560527 TMEM147Q9BVK8 224 aa1.15□□□□□ -2.23
USP8-211ENST00000560527 WDR61Q9GZS3 305 aaKnown RBP1.15□□□□□ -2.23
USP8-211ENST00000560527 RNASE7Q9H1E1 156 aaKnown RBP1.15□□□□□ -2.23
USP8-211ENST00000560527 FUT9Q9Y231 359 aa1.15□□□□□ -2.23
USP8-211ENST00000560527 ERCC6Q03468 1493 aa1.15□□□□□ -2.23
USP8-211ENST00000560527 SCAF11Q99590 1463 aaKnown RBP1.15□□□□□ -2.23
USP8-211ENST00000560527 TRANK1O15050 2925 aa1.15□□□□□ -2.23
USP8-211ENST00000560527 ADGRL3Q9HAR2 1447 aa1.15□□□□□ -2.23
USP8-211ENST00000560527 CHD8Q9HCK8 2581 aa1.14□□□□□ -2.23
USP8-211ENST00000560527 PCF11O94913 1555 aaKnown RBP1.14□□□□□ -2.23
USP8-211ENST00000560527 USP24Q9UPU5 2620 aa1.14□□□□□ -2.23
USP8-211ENST00000560527 CEP164Q9UPV0 1460 aa1.14□□□□□ -2.23
USP8-211ENST00000560527 ROBO3Q96MS0 1386 aa1.14□□□□□ -2.23
USP8-211ENST00000560527 GGT3PA6NGU5 568 aa1.14□□□□□ -2.23
USP8-211ENST00000560527 OR51F1A6NGY5 319 aa1.14□□□□□ -2.23
USP8-211ENST00000560527 H3BT86 120 aa1.14□□□□□ -2.23
USP8-211ENST00000560527 CIAO1O76071 339 aa1.14□□□□□ -2.23
USP8-211ENST00000560527 C1QAP02745 245 aa1.14□□□□□ -2.23
USP8-211ENST00000560527 MSNP26038 577 aaKnown RBP1.14□□□□□ -2.23
USP8-211ENST00000560527 EVX1P49640 407 aa1.14□□□□□ -2.23
USP8-211ENST00000560527 DEFA3P59666 94 aa1.14□□□□□ -2.23
USP8-211ENST00000560527 SPA17Q15506 151 aa1.14□□□□□ -2.23
USP8-211ENST00000560527 TMEM97Q5BJF2 176 aa1.14□□□□□ -2.23
USP8-211ENST00000560527 TMEM86AQ8N2M4 240 aa1.14□□□□□ -2.23
USP8-211ENST00000560527 ZNF676Q8N7Q3 588 aa1.14□□□□□ -2.23
USP8-211ENST00000560527 OR10X1Q8NGY0 326 aa1.14□□□□□ -2.23
USP8-211ENST00000560527 MBD3L1Q8WWY6 194 aa1.14□□□□□ -2.23
USP8-211ENST00000560527 TSPAN32Q96QS1 320 aa1.14□□□□□ -2.23
USP8-211ENST00000560527 SIGMAR1Q99720 223 aa1.14□□□□□ -2.23
USP8-211ENST00000560527 TRIM4Q9C037 500 aa1.14□□□□□ -2.23
USP8-211ENST00000560527 C11orf68Q9H3H3 251 aaKnown RBP1.14□□□□□ -2.23
USP8-211ENST00000560527 CST9LQ9H4G1 147 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms