RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 OR5H6Q8NGV6 325 aa12.99□□□□□ -0.33
TSPAN3-208ENST00000560514 SLC25A38Q96DW6 304 aa12.99□□□□□ -0.33
TSPAN3-208ENST00000560514 AUNIPQ9H7T9 357 aa12.99□□□□□ -0.33
TSPAN3-208ENST00000560514 SMPXQ9UHP9 88 aa12.99□□□□□ -0.33
TSPAN3-208ENST00000560514 LOC100506127A0A0U1RQW1 187 aa12.98□□□□□ -0.33
TSPAN3-208ENST00000560514 IGLC7A0M8Q6 106 aa12.98□□□□□ -0.33
TSPAN3-208ENST00000560514 RTL8CO15255 209 aa12.98□□□□□ -0.33
TSPAN3-208ENST00000560514 CLEC2LP0C7M8 214 aa12.98□□□□□ -0.33
TSPAN3-208ENST00000560514 POM121L12Q8N7R1 296 aa12.98□□□□□ -0.33
TSPAN3-208ENST00000560514 TMEM116Q8NCL8 245 aa12.98□□□□□ -0.33
TSPAN3-208ENST00000560514 BORCS5Q969J3 196 aa12.98□□□□□ -0.33
TSPAN3-208ENST00000560514 RNF126Q9BV68 326 aa12.98□□□□□ -0.33
TSPAN3-208ENST00000560514 RHPN1-AS1Q9BWJ2 59 aa12.98□□□□□ -0.33
TSPAN3-208ENST00000560514 KRTAP4-5Q9BYR2 181 aa12.98□□□□□ -0.33
TSPAN3-208ENST00000560514 C21orf62Q9NYP8 219 aa12.98□□□□□ -0.33
TSPAN3-208ENST00000560514 C15orf61A6NNL5 157 aa12.97□□□□□ -0.33
TSPAN3-208ENST00000560514 PPYP01298 95 aa12.97□□□□□ -0.33
TSPAN3-208ENST00000560514 POU2AF1Q16633 256 aa12.97□□□□□ -0.33
TSPAN3-208ENST00000560514 Q56UQ5 140 aa12.97□□□□□ -0.33
TSPAN3-208ENST00000560514 DHRS11Q6UWP2 260 aa12.97□□□□□ -0.33
TSPAN3-208ENST00000560514 Q6ZTC4 211 aa12.97□□□□□ -0.33
TSPAN3-208ENST00000560514 GBGT1Q8N5D6 347 aa12.97□□□□□ -0.33
TSPAN3-208ENST00000560514 GDPD1Q8N9F7 314 aa12.97□□□□□ -0.33
TSPAN3-208ENST00000560514 Q8NAQ8 132 aa12.97□□□□□ -0.33
TSPAN3-208ENST00000560514 OR5AP2Q8NGF4 316 aa12.97□□□□□ -0.33
TSPAN3-208ENST00000560514 OR13F1Q8NGS4 319 aa12.97□□□□□ -0.33
TSPAN3-208ENST00000560514 S100A16Q96FQ6 103 aaKnown RBP12.97□□□□□ -0.33
TSPAN3-208ENST00000560514 ATP6V0BQ99437 205 aa12.97□□□□□ -0.33
TSPAN3-208ENST00000560514 CHRDL1Q9BU40 450 aa12.97□□□□□ -0.33
TSPAN3-208ENST00000560514 QTRT1Q9BXR0 403 aaKnown RBP12.97□□□□□ -0.33
TSPAN3-208ENST00000560514 CCL28Q9NRJ3 127 aa12.97□□□□□ -0.33
TSPAN3-208ENST00000560514 DYNC1H1Q14204 4646 aaKnown RBP12.97□□□□□ -0.33
TSPAN3-208ENST00000560514 IGHV3-21A0A0B4J1V1 117 aa12.96□□□□□ -0.33
TSPAN3-208ENST00000560514 IGHV7-4-1A0A0J9YVY3 117 aa12.96□□□□□ -0.33
TSPAN3-208ENST00000560514 CHEK1O14757 476 aa12.96□□□□□ -0.33
TSPAN3-208ENST00000560514 YIF1AO95070 293 aa12.96□□□□□ -0.33
TSPAN3-208ENST00000560514 HPRT1P00492 218 aa12.96□□□□□ -0.33
TSPAN3-208ENST00000560514 OR13C7P0DN81 318 aa12.96□□□□□ -0.33
TSPAN3-208ENST00000560514 TAS2R31P59538 309 aa12.96□□□□□ -0.33
TSPAN3-208ENST00000560514 RELQ04864 619 aaPredicted RBP12.96□□□□□ -0.33
TSPAN3-208ENST00000560514 THOC7Q6I9Y2 204 aaKnown RBP12.96□□□□□ -0.33
TSPAN3-208ENST00000560514 HSD17B13Q7Z5P4 300 aaPredicted RBP12.96□□□□□ -0.33
TSPAN3-208ENST00000560514 STHQ8IWL8 128 aa12.96□□□□□ -0.33
TSPAN3-208ENST00000560514 SPAG16Q8N0X2 631 aa12.96□□□□□ -0.33
TSPAN3-208ENST00000560514 CADM3Q8N126 398 aa12.96□□□□□ -0.33
TSPAN3-208ENST00000560514 SECTM1Q8WVN6 248 aa12.96□□□□□ -0.33
TSPAN3-208ENST00000560514 RNF167Q9H6Y7 350 aa12.96□□□□□ -0.33
TSPAN3-208ENST00000560514 DNAH11Q96DT5 4516 aa12.96□□□□□ -0.33
TSPAN3-208ENST00000560514 IGHV3-49A0A0A0MS15 119 aa12.95□□□□□ -0.34
TSPAN3-208ENST00000560514 IGHV4-28A0A0C4DH34 117 aa12.95□□□□□ -0.34
TSPAN3-208ENST00000560514 DNASE2O00115 360 aaPredicted RBP12.95□□□□□ -0.34
TSPAN3-208ENST00000560514 EIF4EP06730 217 aaKnown RBP12.95□□□□□ -0.34
TSPAN3-208ENST00000560514 MIFP14174 115 aa12.95□□□□□ -0.34
TSPAN3-208ENST00000560514 CATR1Q13166 79 aa12.95□□□□□ -0.34
TSPAN3-208ENST00000560514 DMBX1Q8NFW5 382 aa12.95□□□□□ -0.34
TSPAN3-208ENST00000560514 OR10W1Q8NGF6 305 aa12.95□□□□□ -0.34
TSPAN3-208ENST00000560514 SCARB1Q8WTV0 552 aa12.95□□□□□ -0.34
TSPAN3-208ENST00000560514 GPHA2Q96T91 129 aa12.95□□□□□ -0.34
TSPAN3-208ENST00000560514 SLC5A7Q9GZV3 580 aa12.95□□□□□ -0.34
TSPAN3-208ENST00000560514 UPK2O00526 184 aa12.94□□□□□ -0.34
TSPAN3-208ENST00000560514 NUPL2O15504 423 aaKnown RBP12.94□□□□□ -0.34
TSPAN3-208ENST00000560514 TNFSF12O43508 249 aa12.94□□□□□ -0.34
TSPAN3-208ENST00000560514 CD5P06127 495 aa12.94□□□□□ -0.34
TSPAN3-208ENST00000560514 SERPINE2P07093 398 aa12.94□□□□□ -0.34
TSPAN3-208ENST00000560514 NQO2P16083 231 aa12.94□□□□□ -0.34
TSPAN3-208ENST00000560514 NEDD8Q15843 81 aa12.94□□□□□ -0.34
TSPAN3-208ENST00000560514 SOHLH1Q5JUK2 328 aa12.94□□□□□ -0.34
TSPAN3-208ENST00000560514 LEMD1Q68G75 181 aa12.94□□□□□ -0.34
TSPAN3-208ENST00000560514 ZNF575Q86XF7 245 aa12.94□□□□□ -0.34
TSPAN3-208ENST00000560514 NDUFAF3Q9BU61 184 aa12.94□□□□□ -0.34
TSPAN3-208ENST00000560514 PLEKHA2Q9HB19 425 aa12.94□□□□□ -0.34
TSPAN3-208ENST00000560514 DNAH17Q9UFH2 4485 aa12.94□□□□□ -0.34
TSPAN3-208ENST00000560514 DEFB131BA0A096LNP1 70 aa12.93□□□□□ -0.34
TSPAN3-208ENST00000560514 TRAV14DV4A0A0A6YYC5 116 aa12.93□□□□□ -0.34
TSPAN3-208ENST00000560514 DFFBO76075 338 aa12.93□□□□□ -0.34
TSPAN3-208ENST00000560514 TRAPPC2P0DI81 140 aa12.93□□□□□ -0.34
TSPAN3-208ENST00000560514 TRAPPC2BP0DI82 140 aa12.93□□□□□ -0.34
TSPAN3-208ENST00000560514 RBMY1A1P0DJD3 496 aaKnown RBP12.93□□□□□ -0.34
TSPAN3-208ENST00000560514 RBMY1CP0DJD4 496 aa12.93□□□□□ -0.34
TSPAN3-208ENST00000560514 DEFB131AP59861 70 aa12.93□□□□□ -0.34
TSPAN3-208ENST00000560514 RBMY1FQ15415 496 aaKnown RBP12.93□□□□□ -0.34
TSPAN3-208ENST00000560514 LGALS9BQ3B8N2 356 aa12.93□□□□□ -0.34
TSPAN3-208ENST00000560514 TMEM41BQ5BJD5 291 aa12.93□□□□□ -0.34
TSPAN3-208ENST00000560514 TRAV3A0A0B4J244 114 aa12.92□□□□□ -0.34
TSPAN3-208ENST00000560514 SULT1C2O00338 296 aa12.92□□□□□ -0.34
TSPAN3-208ENST00000560514 IFNA10P01566 189 aa12.92□□□□□ -0.34
TSPAN3-208ENST00000560514 AMBPP02760 352 aa12.92□□□□□ -0.34
TSPAN3-208ENST00000560514 PTHLHP12272 177 aa12.92□□□□□ -0.34
TSPAN3-208ENST00000560514 NAT1P18440 290 aa12.92□□□□□ -0.34
TSPAN3-208ENST00000560514 GNRHRP30968 328 aa12.92□□□□□ -0.34
TSPAN3-208ENST00000560514 RPL11P62913 178 aaKnown RBP12.92□□□□□ -0.34
TSPAN3-208ENST00000560514 TCF24Q7RTU0 167 aa12.92□□□□□ -0.34
TSPAN3-208ENST00000560514 HINT2Q9BX68 163 aa12.92□□□□□ -0.34
TSPAN3-208ENST00000560514 TMEM140Q9NV12 185 aa12.92□□□□□ -0.34
TSPAN3-208ENST00000560514 ANAPC10Q9UM13 185 aa12.92□□□□□ -0.34
TSPAN3-208ENST00000560514 F11RQ9Y624 299 aaKnown RBP12.92□□□□□ -0.34
TSPAN3-208ENST00000560514 IGHV3OR16-13A0A075B7E8 117 aa12.91□□□□□ -0.34
TSPAN3-208ENST00000560514 IGHV3-74A0A0B4J1X5 117 aa12.91□□□□□ -0.34
TSPAN3-208ENST00000560514 RPS19P39019 145 aaKnown RBP12.91□□□□□ -0.34
TSPAN3-208ENST00000560514 UBE2NLQ5JXB2 153 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms