RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 TBC1D26Q86UD7 250 aa10.61□□□□□ -0.71
TPM1-223ENST00000560445 CCDC71LQ8N9Z2 235 aa10.61□□□□□ -0.71
TPM1-223ENST00000560445 OR10W1Q8NGF6 305 aa10.61□□□□□ -0.71
TPM1-223ENST00000560445 WDR89Q96FK6 387 aaPredicted RBP10.61□□□□□ -0.71
TPM1-223ENST00000560445 TXN2Q99757 166 aa10.61□□□□□ -0.71
TPM1-223ENST00000560445 PDCD10Q9BUL8 212 aa10.61□□□□□ -0.71
TPM1-223ENST00000560445 EDA2RQ9HAV5 297 aa10.61□□□□□ -0.71
TPM1-223ENST00000560445 RABL2AQ9UBK7 228 aaPredicted RBP10.61□□□□□ -0.71
TPM1-223ENST00000560445 RABL2BQ9UNT1 228 aa10.61□□□□□ -0.71
TPM1-223ENST00000560445 S4R3C0 116 aa10.61□□□□□ -0.71
TPM1-223ENST00000560445 RGS5O15539 181 aa10.6□□□□□ -0.71
TPM1-223ENST00000560445 C8orf88P0DMB2 117 aa10.6□□□□□ -0.71
TPM1-223ENST00000560445 PGAM2P15259 253 aa10.6□□□□□ -0.71
TPM1-223ENST00000560445 RND3P61587 244 aa10.6□□□□□ -0.71
TPM1-223ENST00000560445 SSBP1Q04837 148 aaKnown RBP10.6□□□□□ -0.71
TPM1-223ENST00000560445 ZNF585BQ52M93 769 aa10.6□□□□□ -0.71
TPM1-223ENST00000560445 Q56UQ5 140 aa10.6□□□□□ -0.71
TPM1-223ENST00000560445 LINC00322Q6ZN03 302 aaPredicted RBP10.6□□□□□ -0.71
TPM1-223ENST00000560445 ZFAND1Q8TCF1 268 aa10.6□□□□□ -0.71
TPM1-223ENST00000560445 GGTLC1Q9BX51 225 aa10.6□□□□□ -0.71
TPM1-223ENST00000560445 C6orf62Q9GZU0 229 aaPredicted RBP10.6□□□□□ -0.71
TPM1-223ENST00000560445 NAA50Q9GZZ1 169 aaKnown RBP10.6□□□□□ -0.71
TPM1-223ENST00000560445 EXTL2Q9UBQ6 330 aa10.6□□□□□ -0.71
TPM1-223ENST00000560445 MLXQ9UH92 298 aa10.6□□□□□ -0.71
TPM1-223ENST00000560445 LOC102724200A0A096LPH7 203 aaPredicted RBP10.59□□□□□ -0.71
TPM1-223ENST00000560445 OR2T8A6NH00 312 aa10.59□□□□□ -0.71
TPM1-223ENST00000560445 OR4C46A6NHA9 309 aa10.59□□□□□ -0.71
TPM1-223ENST00000560445 K7EMT4 169 aa10.59□□□□□ -0.71
TPM1-223ENST00000560445 CORTO00230 105 aa10.59□□□□□ -0.71
TPM1-223ENST00000560445 CD5P06127 495 aa10.59□□□□□ -0.71
TPM1-223ENST00000560445 CD7P09564 240 aa10.59□□□□□ -0.71
TPM1-223ENST00000560445 FCGR2BP31994 310 aaPredicted RBP10.59□□□□□ -0.71
TPM1-223ENST00000560445 APOC4P55056 127 aa10.59□□□□□ -0.71
TPM1-223ENST00000560445 MFAP4P55083 255 aa10.59□□□□□ -0.71
TPM1-223ENST00000560445 CMC4P56277 68 aaPredicted RBP10.59□□□□□ -0.71
TPM1-223ENST00000560445 PRCDQ00LT1 54 aa10.59□□□□□ -0.71
TPM1-223ENST00000560445 TM4SF20Q53R12 229 aa10.59□□□□□ -0.71
TPM1-223ENST00000560445 OR2C3Q8N628 320 aa10.59□□□□□ -0.71
TPM1-223ENST00000560445 DEFB125Q8N687 156 aa10.59□□□□□ -0.71
TPM1-223ENST00000560445 UBAC2Q8NBM4 344 aa10.59□□□□□ -0.71
TPM1-223ENST00000560445 ZNF114Q8NC26 417 aa10.59□□□□□ -0.71
TPM1-223ENST00000560445 SCARB1Q8WTV0 552 aa10.59□□□□□ -0.71
TPM1-223ENST00000560445 CACNG8Q8WXS5 425 aa10.59□□□□□ -0.71
TPM1-223ENST00000560445 HIPK2Q9H2X6 1198 aa10.59□□□□□ -0.71
TPM1-223ENST00000560445 COPZ2Q9P299 210 aa10.59□□□□□ -0.71
TPM1-223ENST00000560445 C15orf62A8K5M9 175 aa10.58□□□□□ -0.72
TPM1-223ENST00000560445 TSPAN4O14817 238 aa10.58□□□□□ -0.72
TPM1-223ENST00000560445 NOL3O60936 208 aaKnown RBP10.58□□□□□ -0.72
TPM1-223ENST00000560445 SCAF4O95104 1147 aaKnown RBP10.58□□□□□ -0.72
TPM1-223ENST00000560445 SNCAP37840 140 aa10.58□□□□□ -0.72
TPM1-223ENST00000560445 AKR1C2P52895 323 aa10.58□□□□□ -0.72
TPM1-223ENST00000560445 SUB1P53999 127 aaKnown RBP eCLIP10.58□□□□□ -0.72
TPM1-223ENST00000560445 TAS2R19P59542 299 aa10.58□□□□□ -0.72
TPM1-223ENST00000560445 HSPE1P61604 102 aaKnown RBP10.58□□□□□ -0.72
TPM1-223ENST00000560445 MEF2DQ14814 521 aa10.58□□□□□ -0.72
TPM1-223ENST00000560445 UNQ9165/PRO28630Q6UXU0 137 aa10.58□□□□□ -0.72
TPM1-223ENST00000560445 SLC35G3Q8N808 338 aa10.58□□□□□ -0.72
TPM1-223ENST00000560445 RAB2BQ8WUD1 216 aa10.58□□□□□ -0.72
TPM1-223ENST00000560445 SEC22AQ96IW7 307 aa10.58□□□□□ -0.72
TPM1-223ENST00000560445 GINS3Q9BRX5 216 aa10.58□□□□□ -0.72
TPM1-223ENST00000560445 C20orf24Q9BUV8 137 aa10.58□□□□□ -0.72
TPM1-223ENST00000560445 ENY2Q9NPA8 101 aa10.58□□□□□ -0.72
TPM1-223ENST00000560445 KLK11Q9UBX7 282 aa10.58□□□□□ -0.72
TPM1-223ENST00000560445 CACFD1Q9UGQ2 172 aa10.58□□□□□ -0.72
TPM1-223ENST00000560445 NSG2Q9Y328 171 aa10.58□□□□□ -0.72
TPM1-223ENST00000560445 M0QYG6 137 aa10.57□□□□□ -0.72
TPM1-223ENST00000560445 JTBO76095 146 aa10.57□□□□□ -0.72
TPM1-223ENST00000560445 ALDH3B2P48448 385 aa10.57□□□□□ -0.72
TPM1-223ENST00000560445 PIGPP57054 158 aa10.57□□□□□ -0.72
TPM1-223ENST00000560445 RNASE12Q5GAN4 147 aaKnown RBP10.57□□□□□ -0.72
TPM1-223ENST00000560445 CLVS1Q8IUQ0 354 aaPredicted RBP10.57□□□□□ -0.72
TPM1-223ENST00000560445 RNASE11Q8TAA1 199 aaKnown RBP10.57□□□□□ -0.72
TPM1-223ENST00000560445 MRGPRFQ96AM1 343 aa10.57□□□□□ -0.72
TPM1-223ENST00000560445 RRNAD1Q96FB5 475 aaKnown RBP10.57□□□□□ -0.72
TPM1-223ENST00000560445 MISP3Q96FF7 219 aa10.57□□□□□ -0.72
TPM1-223ENST00000560445 FAM110AQ9BQ89 295 aa10.57□□□□□ -0.72
TPM1-223ENST00000560445 BCL7BQ9BQE9 202 aa10.57□□□□□ -0.72
TPM1-223ENST00000560445 MTFP1Q9UDX5 166 aa10.57□□□□□ -0.72
TPM1-223ENST00000560445 GABARAPH6UMI1 98 aa10.56□□□□□ -0.72
TPM1-223ENST00000560445 K7EIM0 57 aa10.56□□□□□ -0.72
TPM1-223ENST00000560445 UBE2CO00762 179 aa10.56□□□□□ -0.72
TPM1-223ENST00000560445 GNG7O60262 68 aa10.56□□□□□ -0.72
TPM1-223ENST00000560445 CD3DP04234 171 aa10.56□□□□□ -0.72
TPM1-223ENST00000560445 NPBWR1P48145 328 aa10.56□□□□□ -0.72
TPM1-223ENST00000560445 TMBIM6P55061 237 aa10.56□□□□□ -0.72
TPM1-223ENST00000560445 TRIM16LQ309B1 348 aa10.56□□□□□ -0.72
TPM1-223ENST00000560445 ZFAND6Q6FIF0 208 aa10.56□□□□□ -0.72
TPM1-223ENST00000560445 TMEM229BQ8NBD8 167 aa10.56□□□□□ -0.72
TPM1-223ENST00000560445 OR52I2Q8NH67 350 aa10.56□□□□□ -0.72
TPM1-223ENST00000560445 TERB2Q8NHR7 220 aa10.56□□□□□ -0.72
TPM1-223ENST00000560445 PIGBOS1A0A0B4J2F0 54 aa10.55□□□□□ -0.72
TPM1-223ENST00000560445 IGHV3-35A0A0C4DH35 117 aa10.55□□□□□ -0.72
TPM1-223ENST00000560445 LCE6AA0A183 80 aa10.55□□□□□ -0.72
TPM1-223ENST00000560445 C3orf85A0A1B0GTC6 90 aa10.55□□□□□ -0.72
TPM1-223ENST00000560445 RBMY1BA6NDE4 496 aaKnown RBP10.55□□□□□ -0.72
TPM1-223ENST00000560445 RBMY1EA6NEQ0 496 aaKnown RBP10.55□□□□□ -0.72
TPM1-223ENST00000560445 INS-IGF2F8WCM5 200 aa10.55□□□□□ -0.72
TPM1-223ENST00000560445 YIF1AO95070 293 aa10.55□□□□□ -0.72
TPM1-223ENST00000560445 RAB3DO95716 219 aa10.55□□□□□ -0.72
TPM1-223ENST00000560445 IFNA17P01571 189 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms