RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 CACFD1Q9UGQ2 172 aa10.57□□□□□ -0.72
SMAD3-214ENST00000560402 PRELID3BQ9Y3B1 194 aa10.57□□□□□ -0.72
SMAD3-214ENST00000560402 H0YIZ8 118 aa10.56□□□□□ -0.72
SMAD3-214ENST00000560402 ATP6V0E1O15342 81 aa10.56□□□□□ -0.72
SMAD3-214ENST00000560402 NBR2O15453 112 aa10.56□□□□□ -0.72
SMAD3-214ENST00000560402 PPIFP30405 207 aaKnown RBP10.56□□□□□ -0.72
SMAD3-214ENST00000560402 ZNF616Q08AN1 781 aa10.56□□□□□ -0.72
SMAD3-214ENST00000560402 SLC7A5P1Q8MH63 180 aa10.56□□□□□ -0.72
SMAD3-214ENST00000560402 OR11H1Q8NG94 326 aa10.56□□□□□ -0.72
SMAD3-214ENST00000560402 ADTRPQ96IZ2 230 aa10.56□□□□□ -0.72
SMAD3-214ENST00000560402 PRR25Q96S07 402 aa10.56□□□□□ -0.72
SMAD3-214ENST00000560402 NABP2Q9BQ15 211 aa10.56□□□□□ -0.72
SMAD3-214ENST00000560402 SLC25A32Q9H2D1 315 aa10.56□□□□□ -0.72
SMAD3-214ENST00000560402 KIAA1456Q9P272 454 aa10.56□□□□□ -0.72
SMAD3-214ENST00000560402 PFDN2Q9UHV9 154 aa10.56□□□□□ -0.72
SMAD3-214ENST00000560402 ZNF256Q9Y2P7 627 aaPredicted RBP10.56□□□□□ -0.72
SMAD3-214ENST00000560402 RCL1Q9Y2P8 373 aaKnown RBP10.56□□□□□ -0.72
SMAD3-214ENST00000560402 LINC00862A6NCI5 91 aa10.55□□□□□ -0.72
SMAD3-214ENST00000560402 FAM90A26D6RGX4 464 aa10.55□□□□□ -0.72
SMAD3-214ENST00000560402 I3L521 148 aa10.55□□□□□ -0.72
SMAD3-214ENST00000560402 MED6O75586 246 aa10.55□□□□□ -0.72
SMAD3-214ENST00000560402 JTBO76095 146 aa10.55□□□□□ -0.72
SMAD3-214ENST00000560402 NDUFA3O95167 84 aa10.55□□□□□ -0.72
SMAD3-214ENST00000560402 IGLV1-40P01703 118 aa10.55□□□□□ -0.72
SMAD3-214ENST00000560402 C5orf64Q2M2E5 130 aa10.55□□□□□ -0.72
SMAD3-214ENST00000560402 ALKAL2Q6UX46 152 aa10.55□□□□□ -0.72
SMAD3-214ENST00000560402 ZNF833PQ6ZTB9 187 aa10.55□□□□□ -0.72
SMAD3-214ENST00000560402 BAP18Q8IXM2 172 aa10.55□□□□□ -0.72
SMAD3-214ENST00000560402 ODF3L1Q8IXM7 274 aa10.55□□□□□ -0.72
SMAD3-214ENST00000560402 SPAG16Q8N0X2 631 aa10.55□□□□□ -0.72
SMAD3-214ENST00000560402 ZNF491Q8N8L2 437 aa10.55□□□□□ -0.72
SMAD3-214ENST00000560402 RAB40CQ96S21 281 aa10.55□□□□□ -0.72
SMAD3-214ENST00000560402 MRPL20Q9BYC9 149 aaKnown RBP10.55□□□□□ -0.72
SMAD3-214ENST00000560402 PARP11Q9NR21 331 aa10.55□□□□□ -0.72
SMAD3-214ENST00000560402 RNF150Q9ULK6 438 aa10.55□□□□□ -0.72
SMAD3-214ENST00000560402 GAB2Q9UQC2 676 aa10.55□□□□□ -0.72
SMAD3-214ENST00000560402 STAB2Q8WWQ8 2551 aa10.54□□□□□ -0.72
SMAD3-214ENST00000560402 IGHV7-81A0A0B4J1V7 117 aa10.54□□□□□ -0.72
SMAD3-214ENST00000560402 TRAV41A0A0B4J266 112 aa10.54□□□□□ -0.72
SMAD3-214ENST00000560402 ST8SIA5O15466 376 aa10.54□□□□□ -0.72
SMAD3-214ENST00000560402 SCAF4O95104 1147 aaKnown RBP10.54□□□□□ -0.72
SMAD3-214ENST00000560402 LY86O95711 162 aa10.54□□□□□ -0.72
SMAD3-214ENST00000560402 CFDP00746 253 aaPredicted RBP10.54□□□□□ -0.72
SMAD3-214ENST00000560402 LPAR6P43657 344 aa10.54□□□□□ -0.72
SMAD3-214ENST00000560402 CRIP2P52943 208 aaPredicted RBP10.54□□□□□ -0.72
SMAD3-214ENST00000560402 ERVK-16P61578 105 aa10.54□□□□□ -0.72
SMAD3-214ENST00000560402 NPBQ8NG41 125 aa10.54□□□□□ -0.72
SMAD3-214ENST00000560402 PARP12Q9H0J9 701 aaKnown RBP10.54□□□□□ -0.72
SMAD3-214ENST00000560402 GNB4Q9HAV0 340 aa10.54□□□□□ -0.72
SMAD3-214ENST00000560402 COA4Q9NYJ1 87 aa10.54□□□□□ -0.72
SMAD3-214ENST00000560402 DNAH7Q8WXX0 4024 aa10.54□□□□□ -0.72
SMAD3-214ENST00000560402 SORL1Q92673 2214 aa10.54□□□□□ -0.72
SMAD3-214ENST00000560402 SAA2-SAA4A0A096LPE2 208 aa10.53□□□□□ -0.72
SMAD3-214ENST00000560402 M0R1X1 148 aa10.53□□□□□ -0.72
SMAD3-214ENST00000560402 RAB29O14966 203 aa10.53□□□□□ -0.72
SMAD3-214ENST00000560402 RBFOX2O43251 390 aaKnown RBP eCLIP10.53□□□□□ -0.72
SMAD3-214ENST00000560402 SSSCA1O60232 199 aa10.53□□□□□ -0.72
SMAD3-214ENST00000560402 IGLV2-14P01704 120 aa10.53□□□□□ -0.72
SMAD3-214ENST00000560402 SAA2P0DJI9 122 aaPredicted RBP10.53□□□□□ -0.72
SMAD3-214ENST00000560402 CAV2P51636 162 aa10.53□□□□□ -0.72
SMAD3-214ENST00000560402 BAXQ07812 192 aa10.53□□□□□ -0.72
SMAD3-214ENST00000560402 ZNF266Q14584 549 aa10.53□□□□□ -0.72
SMAD3-214ENST00000560402 ZNF429Q86V71 674 aa10.53□□□□□ -0.72
SMAD3-214ENST00000560402 STX12Q86Y82 276 aa10.53□□□□□ -0.72
SMAD3-214ENST00000560402 OR2C3Q8N628 320 aa10.53□□□□□ -0.72
SMAD3-214ENST00000560402 OR1N2Q8NGR9 330 aa10.53□□□□□ -0.72
SMAD3-214ENST00000560402 GPHA2Q96T91 129 aa10.53□□□□□ -0.72
SMAD3-214ENST00000560402 SDHAF2Q9NX18 166 aa10.53□□□□□ -0.72
SMAD3-214ENST00000560402 SMAD5-AS1Q9Y6J3 95 aa10.53□□□□□ -0.72
SMAD3-214ENST00000560402 C3orf84H3BNL1 204 aa10.52□□□□□ -0.73
SMAD3-214ENST00000560402 OVOL1O14753 267 aa10.52□□□□□ -0.73
SMAD3-214ENST00000560402 RAB9AP51151 201 aa10.52□□□□□ -0.73
SMAD3-214ENST00000560402 ID3Q02535 119 aa10.52□□□□□ -0.73
SMAD3-214ENST00000560402 ASPHD1Q5U4P2 390 aa10.52□□□□□ -0.73
SMAD3-214ENST00000560402 H2BFWTQ7Z2G1 175 aa10.52□□□□□ -0.73
SMAD3-214ENST00000560402 OR4S2Q8NH73 311 aa10.52□□□□□ -0.73
SMAD3-214ENST00000560402 GPR146Q96CH1 333 aa10.52□□□□□ -0.73
SMAD3-214ENST00000560402 CLCC1Q96S66 551 aa10.52□□□□□ -0.73
SMAD3-214ENST00000560402 AIFM2Q9BRQ8 373 aa10.52□□□□□ -0.73
SMAD3-214ENST00000560402 KLK15Q9H2R5 256 aa10.52□□□□□ -0.73
SMAD3-214ENST00000560402 IFI27L2Q9H2X8 130 aa10.52□□□□□ -0.73
SMAD3-214ENST00000560402 MED9Q9NWA0 146 aa10.52□□□□□ -0.73
SMAD3-214ENST00000560402 CACNG5Q9UF02 275 aa10.52□□□□□ -0.73
SMAD3-214ENST00000560402 FBXL17Q9UF56 701 aa10.52□□□□□ -0.73
SMAD3-214ENST00000560402 WSB1Q9Y6I7 421 aa10.52□□□□□ -0.73
SMAD3-214ENST00000560402 RPS10-NUDT3A0A1W2PQS6 291 aa10.51□□□□□ -0.73
SMAD3-214ENST00000560402 MSGN1A6NI15 193 aa10.51□□□□□ -0.73
SMAD3-214ENST00000560402 G3V318 75 aa10.51□□□□□ -0.73
SMAD3-214ENST00000560402 RRHO14718 337 aa10.51□□□□□ -0.73
SMAD3-214ENST00000560402 HPRT1P00492 218 aa10.51□□□□□ -0.73
SMAD3-214ENST00000560402 CNTFRP26992 372 aa10.51□□□□□ -0.73
SMAD3-214ENST00000560402 POLR2GP62487 172 aaKnown RBP eCLIP10.51□□□□□ -0.73
SMAD3-214ENST00000560402 GNB1P62873 340 aa10.51□□□□□ -0.73
SMAD3-214ENST00000560402 TAGLNQ01995 201 aaKnown RBP10.51□□□□□ -0.73
SMAD3-214ENST00000560402 EIF4EBP1Q13541 118 aaPredicted RBP10.51□□□□□ -0.73
SMAD3-214ENST00000560402 KIAA0141Q14154 515 aaPredicted RBP10.51□□□□□ -0.73
SMAD3-214ENST00000560402 ECSCRQ19T08 205 aa10.51□□□□□ -0.73
SMAD3-214ENST00000560402 ZNF585BQ52M93 769 aa10.51□□□□□ -0.73
SMAD3-214ENST00000560402 C19orf54Q5BKX5 351 aa10.51□□□□□ -0.73
SMAD3-214ENST00000560402 COMMD7Q86VX2 200 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms