RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 C3orf56Q8N813 242 aa11.23□□□□□ -0.61
SMAD6-204ENST00000559931 OR4D5Q8NGN0 318 aa11.23□□□□□ -0.61
SMAD6-204ENST00000559931 DTD1Q8TEA8 209 aa11.23□□□□□ -0.61
SMAD6-204ENST00000559931 TCRBV4S1A1TA0A5B7 111 aa11.22□□□□□ -0.61
SMAD6-204ENST00000559931 SOX15O60248 233 aa11.22□□□□□ -0.61
SMAD6-204ENST00000559931 FBXO24O75426 580 aa11.22□□□□□ -0.61
SMAD6-204ENST00000559931 IGHG4P01861 327 aa11.22□□□□□ -0.61
SMAD6-204ENST00000559931 ELANEP08246 267 aa11.22□□□□□ -0.61
SMAD6-204ENST00000559931 CD28P10747 220 aa11.22□□□□□ -0.61
SMAD6-204ENST00000559931 IAPPP10997 89 aa11.22□□□□□ -0.61
SMAD6-204ENST00000559931 TPPP2P59282 170 aa11.22□□□□□ -0.61
SMAD6-204ENST00000559931 S100A10P60903 97 aa11.22□□□□□ -0.61
SMAD6-204ENST00000559931 RRAS2P62070 204 aaPredicted RBP11.22□□□□□ -0.61
SMAD6-204ENST00000559931 POLR2GP62487 172 aaKnown RBP eCLIP11.22□□□□□ -0.61
SMAD6-204ENST00000559931 ID3Q02535 119 aa11.22□□□□□ -0.61
SMAD6-204ENST00000559931 CFHR3Q02985 330 aa11.22□□□□□ -0.61
SMAD6-204ENST00000559931 FOXE3Q13461 319 aa11.22□□□□□ -0.61
SMAD6-204ENST00000559931 LCNL1Q6ZST4 164 aa11.22□□□□□ -0.61
SMAD6-204ENST00000559931 OR2C3Q8N628 320 aa11.22□□□□□ -0.61
SMAD6-204ENST00000559931 LSM5Q9Y4Y9 91 aaKnown RBP11.22□□□□□ -0.61
SMAD6-204ENST00000559931 TENM1Q9UKZ4 2725 aa11.21□□□□□ -0.61
SMAD6-204ENST00000559931 L7N2F9 121 aa11.21□□□□□ -0.61
SMAD6-204ENST00000559931 SSSCA1O60232 199 aa11.21□□□□□ -0.61
SMAD6-204ENST00000559931 IFNA10P01566 189 aa11.21□□□□□ -0.61
SMAD6-204ENST00000559931 IGLV1-40P01703 118 aa11.21□□□□□ -0.61
SMAD6-204ENST00000559931 MBPP02686 304 aaPredicted RBP11.21□□□□□ -0.61
SMAD6-204ENST00000559931 CRYGCP07315 174 aa11.21□□□□□ -0.61
SMAD6-204ENST00000559931 CTRB1P17538 263 aa11.21□□□□□ -0.61
SMAD6-204ENST00000559931 CXCL3P19876 107 aa11.21□□□□□ -0.61
SMAD6-204ENST00000559931 RAB9AP51151 201 aa11.21□□□□□ -0.61
SMAD6-204ENST00000559931 VAMP2P63027 116 aa11.21□□□□□ -0.61
SMAD6-204ENST00000559931 PDLIM3Q53GG5 364 aaPredicted RBP11.21□□□□□ -0.61
SMAD6-204ENST00000559931 CTRB2Q6GPI1 263 aa11.21□□□□□ -0.61
SMAD6-204ENST00000559931 C19orf35Q6ZS72 473 aa11.21□□□□□ -0.61
SMAD6-204ENST00000559931 WFDC12Q8WWY7 111 aa11.21□□□□□ -0.61
SMAD6-204ENST00000559931 CIB3Q96Q77 187 aaPredicted RBP11.21□□□□□ -0.61
SMAD6-204ENST00000559931 KLK15Q9H2R5 256 aa11.21□□□□□ -0.61
SMAD6-204ENST00000559931 SLA2Q9H6Q3 261 aa11.21□□□□□ -0.61
SMAD6-204ENST00000559931 PAIP2BQ9ULR5 123 aaKnown RBP11.21□□□□□ -0.61
SMAD6-204ENST00000559931 H3BUA1 57 aa11.2□□□□□ -0.62
SMAD6-204ENST00000559931 OR2J3O76001 311 aa11.2□□□□□ -0.62
SMAD6-204ENST00000559931 RPLP1P05386 114 aaKnown RBP11.2□□□□□ -0.62
SMAD6-204ENST00000559931 HIST1H1BP16401 226 aaKnown RBP11.2□□□□□ -0.62
SMAD6-204ENST00000559931 HTR2BP41595 481 aa11.2□□□□□ -0.62
SMAD6-204ENST00000559931 H2BFSP57053 126 aa11.2□□□□□ -0.62
SMAD6-204ENST00000559931 SRSF4Q08170 494 aaKnown RBP11.2□□□□□ -0.62
SMAD6-204ENST00000559931 OR11H7Q8NGC8 314 aa11.2□□□□□ -0.62
SMAD6-204ENST00000559931 OR1L6Q8NGR2 347 aa11.2□□□□□ -0.62
SMAD6-204ENST00000559931 MISP3Q96FF7 219 aa11.2□□□□□ -0.62
SMAD6-204ENST00000559931 P2RX4Q99571 388 aa11.2□□□□□ -0.62
SMAD6-204ENST00000559931 NMES1Q9C002 83 aa11.2□□□□□ -0.62
SMAD6-204ENST00000559931 ZFP57Q9NU63 452 aa11.2□□□□□ -0.62
SMAD6-204ENST00000559931 THYN1Q9P016 225 aa11.2□□□□□ -0.62
SMAD6-204ENST00000559931 FBXL7Q9UJT9 491 aa11.2□□□□□ -0.62
SMAD6-204ENST00000559931 F11RQ9Y624 299 aaKnown RBP11.2□□□□□ -0.62
SMAD6-204ENST00000559931 INS-IGF2F8WCM5 200 aa11.19□□□□□ -0.62
SMAD6-204ENST00000559931 RLN2P04090 185 aa11.19□□□□□ -0.62
SMAD6-204ENST00000559931 PVALBP20472 110 aaPredicted RBP11.19□□□□□ -0.62
SMAD6-204ENST00000559931 PSMB8P28062 276 aa11.19□□□□□ -0.62
SMAD6-204ENST00000559931 KRTAP10-3P60369 221 aa11.19□□□□□ -0.62
SMAD6-204ENST00000559931 RPP30P78346 268 aaKnown RBP11.19□□□□□ -0.62
SMAD6-204ENST00000559931 RHOGP84095 191 aa11.19□□□□□ -0.62
SMAD6-204ENST00000559931 ATP5G2Q06055 141 aa11.19□□□□□ -0.62
SMAD6-204ENST00000559931 RAB32Q13637 225 aa11.19□□□□□ -0.62
SMAD6-204ENST00000559931 LRRC37A5PQ49AS3 106 aa11.19□□□□□ -0.62
SMAD6-204ENST00000559931 HIST2H2BDQ6DRA6 164 aa11.19□□□□□ -0.62
SMAD6-204ENST00000559931 C11orf87Q6NUJ2 197 aa11.19□□□□□ -0.62
SMAD6-204ENST00000559931 NOXA1Q86UR1 476 aa11.19□□□□□ -0.62
SMAD6-204ENST00000559931 SLC24A4Q8NFF2 622 aa11.19□□□□□ -0.62
SMAD6-204ENST00000559931 OR1P1Q8NH06 330 aa11.19□□□□□ -0.62
SMAD6-204ENST00000559931 WIPF2Q8TF74 440 aaPredicted RBP11.19□□□□□ -0.62
SMAD6-204ENST00000559931 RAB40CQ96S21 281 aa11.19□□□□□ -0.62
SMAD6-204ENST00000559931 CITED2Q99967 270 aaPredicted RBP11.19□□□□□ -0.62
SMAD6-204ENST00000559931 NEURL2Q9BR09 285 aa11.19□□□□□ -0.62
SMAD6-204ENST00000559931 ZNF436Q9C0F3 470 aaPredicted RBP11.19□□□□□ -0.62
SMAD6-204ENST00000559931 PSENENQ9NZ42 101 aa11.19□□□□□ -0.62
SMAD6-204ENST00000559931 RCL1Q9Y2P8 373 aaKnown RBP11.19□□□□□ -0.62
SMAD6-204ENST00000559931 U3KQ87 197 aa11.19□□□□□ -0.62
SMAD6-204ENST00000559931 A0A0G2JLM5 398 aa11.18□□□□□ -0.62
SMAD6-204ENST00000559931 A0A1W2PRX2 142 aa11.18□□□□□ -0.62
SMAD6-204ENST00000559931 NUDT19A8MXV4 375 aa11.18□□□□□ -0.62
SMAD6-204ENST00000559931 K7EPK0 472 aa11.18□□□□□ -0.62
SMAD6-204ENST00000559931 LY86O95711 162 aa11.18□□□□□ -0.62
SMAD6-204ENST00000559931 RNASE2P10153 161 aaKnown RBP11.18□□□□□ -0.62
SMAD6-204ENST00000559931 NPY1RP25929 384 aa11.18□□□□□ -0.62
SMAD6-204ENST00000559931 RPL23AP62750 156 aaKnown RBP11.18□□□□□ -0.62
SMAD6-204ENST00000559931 DEFA5Q01523 94 aa11.18□□□□□ -0.62
SMAD6-204ENST00000559931 TCTEX1D4Q5JR98 221 aa11.18□□□□□ -0.62
SMAD6-204ENST00000559931 SPANXN5Q5MJ07 72 aa11.18□□□□□ -0.62
SMAD6-204ENST00000559931 NECAP1Q8NC96 275 aa11.18□□□□□ -0.62
SMAD6-204ENST00000559931 CHAC2Q8WUX2 184 aa11.18□□□□□ -0.62
SMAD6-204ENST00000559931 PINX1Q96BK5 328 aaKnown RBP11.18□□□□□ -0.62
SMAD6-204ENST00000559931 WDR89Q96FK6 387 aaPredicted RBP11.18□□□□□ -0.62
SMAD6-204ENST00000559931 IGLV11-55A0A075B6I3 123 aa11.17□□□□□ -0.62
SMAD6-204ENST00000559931 NDUFB8O95169 186 aa11.17□□□□□ -0.62
SMAD6-204ENST00000559931 IGHV3-11P01762 117 aa11.17□□□□□ -0.62
SMAD6-204ENST00000559931 IFNA4P05014 189 aa11.17□□□□□ -0.62
SMAD6-204ENST00000559931 RAB11AP62491 216 aa11.17□□□□□ -0.62
SMAD6-204ENST00000559931 CD83Q01151 205 aa11.17□□□□□ -0.62
SMAD6-204ENST00000559931 IL15RAQ13261 267 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms