RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 F11RQ9Y624 299 aaKnown RBP11.29□□□□□ -0.6
RABGGTA-211ENST00000559850 SORL1Q92673 2214 aa11.29□□□□□ -0.6
RABGGTA-211ENST00000559850 A0A0B4J293 547 aa11.28□□□□□ -0.6
RABGGTA-211ENST00000559850 IZUMO1RA6ND01 250 aa11.28□□□□□ -0.6
RABGGTA-211ENST00000559850 ZNF701M0R085 212 aaPredicted RBP11.28□□□□□ -0.6
RABGGTA-211ENST00000559850 CLEC3BP05452 202 aa11.28□□□□□ -0.6
RABGGTA-211ENST00000559850 P0C879 139 aa11.28□□□□□ -0.6
RABGGTA-211ENST00000559850 UCP1P25874 307 aa11.28□□□□□ -0.6
RABGGTA-211ENST00000559850 Q8N402 240 aa11.28□□□□□ -0.6
RABGGTA-211ENST00000559850 RNASE11Q8TAA1 199 aaKnown RBP11.28□□□□□ -0.6
RABGGTA-211ENST00000559850 ZNF502Q8TBZ5 544 aa11.28□□□□□ -0.6
RABGGTA-211ENST00000559850 CACNG8Q8WXS5 425 aa11.28□□□□□ -0.6
RABGGTA-211ENST00000559850 TMEM230Q96A57 120 aa11.28□□□□□ -0.6
RABGGTA-211ENST00000559850 TMEM56Q96MV1 263 aa11.28□□□□□ -0.6
RABGGTA-211ENST00000559850 CRYM-AS1A6NIL9 109 aa11.27□□□□□ -0.61
RABGGTA-211ENST00000559850 ST8SIA3O43173 380 aa11.27□□□□□ -0.61
RABGGTA-211ENST00000559850 PRCDQ00LT1 54 aa11.27□□□□□ -0.61
RABGGTA-211ENST00000559850 SURF2Q15527 256 aaPredicted RBP11.27□□□□□ -0.61
RABGGTA-211ENST00000559850 Q6ZRM9 215 aa11.27□□□□□ -0.61
RABGGTA-211ENST00000559850 HSD17B13Q7Z5P4 300 aaPredicted RBP11.27□□□□□ -0.61
RABGGTA-211ENST00000559850 CXorf58Q96LI9 332 aa11.27□□□□□ -0.61
RABGGTA-211ENST00000559850 B9D2Q9BPU9 175 aa11.27□□□□□ -0.61
RABGGTA-211ENST00000559850 TMEM222Q9H0R3 208 aa11.27□□□□□ -0.61
RABGGTA-211ENST00000559850 SLC2A8Q9NY64 477 aa11.27□□□□□ -0.61
RABGGTA-211ENST00000559850 PEMTQ9UBM1 199 aa11.27□□□□□ -0.61
RABGGTA-211ENST00000559850 SCP2D1Q9UJQ7 156 aa11.27□□□□□ -0.61
RABGGTA-211ENST00000559850 TRBV7-1A0A0A6YYK4 115 aa11.26□□□□□ -0.61
RABGGTA-211ENST00000559850 ZNF320A2RRD8 509 aa11.26□□□□□ -0.61
RABGGTA-211ENST00000559850 K7EIM0 57 aa11.26□□□□□ -0.61
RABGGTA-211ENST00000559850 IGHV3-48P01763 117 aa11.26□□□□□ -0.61
RABGGTA-211ENST00000559850 ETV6P41212 452 aa11.26□□□□□ -0.61
RABGGTA-211ENST00000559850 HSPE1P61604 102 aaKnown RBP11.26□□□□□ -0.61
RABGGTA-211ENST00000559850 UNQ9165/PRO28630Q6UXU0 137 aa11.26□□□□□ -0.61
RABGGTA-211ENST00000559850 SELENOHQ8IZQ5 122 aaKnown RBP11.26□□□□□ -0.61
RABGGTA-211ENST00000559850 TOMM5Q8N4H5 51 aa11.26□□□□□ -0.61
RABGGTA-211ENST00000559850 OR2C3Q8N628 320 aa11.26□□□□□ -0.61
RABGGTA-211ENST00000559850 UBAC2Q8NBM4 344 aa11.26□□□□□ -0.61
RABGGTA-211ENST00000559850 GLYATL2Q8WU03 294 aa11.26□□□□□ -0.61
RABGGTA-211ENST00000559850 MISP3Q96FF7 219 aa11.26□□□□□ -0.61
RABGGTA-211ENST00000559850 PLEKHA3Q9HB20 300 aa11.26□□□□□ -0.61
RABGGTA-211ENST00000559850 THYN1Q9P016 225 aa11.26□□□□□ -0.61
RABGGTA-211ENST00000559850 COL7A1Q02388 2944 aa11.26□□□□□ -0.61
RABGGTA-211ENST00000559850 DNAH9Q9NYC9 4486 aa11.26□□□□□ -0.61
RABGGTA-211ENST00000559850 OR2T8A6NH00 312 aa11.25□□□□□ -0.61
RABGGTA-211ENST00000559850 C2orf70A6NJV1 201 aa11.25□□□□□ -0.61
RABGGTA-211ENST00000559850 CYB5BO43169 146 aa11.25□□□□□ -0.61
RABGGTA-211ENST00000559850 NXPH3O95157 252 aa11.25□□□□□ -0.61
RABGGTA-211ENST00000559850 CDS2O95674 445 aa11.25□□□□□ -0.61
RABGGTA-211ENST00000559850 AKR1C4P17516 323 aa11.25□□□□□ -0.61
RABGGTA-211ENST00000559850 FAM209BQ5JX69 171 aa11.25□□□□□ -0.61
RABGGTA-211ENST00000559850 TMEM268Q5VZI3 342 aa11.25□□□□□ -0.61
RABGGTA-211ENST00000559850 PLET1Q6UQ28 207 aa11.25□□□□□ -0.61
RABGGTA-211ENST00000559850 SCARB1Q8WTV0 552 aa11.25□□□□□ -0.61
RABGGTA-211ENST00000559850 RRNAD1Q96FB5 475 aaKnown RBP11.25□□□□□ -0.61
RABGGTA-211ENST00000559850 SRRQ9GZT4 340 aa11.25□□□□□ -0.61
RABGGTA-211ENST00000559850 SMAD5-AS1Q9Y6J3 95 aa11.25□□□□□ -0.61
RABGGTA-211ENST00000559850 IGHV3OR16-8A0A075B7F1 116 aa11.24□□□□□ -0.61
RABGGTA-211ENST00000559850 F8W735 103 aaPredicted RBP11.24□□□□□ -0.61
RABGGTA-211ENST00000559850 TGOLN2O43493 480 aa11.24□□□□□ -0.61
RABGGTA-211ENST00000559850 ATG12O94817 140 aa11.24□□□□□ -0.61
RABGGTA-211ENST00000559850 IFNA17P01571 189 aa11.24□□□□□ -0.61
RABGGTA-211ENST00000559850 FOLR2P14207 255 aa11.24□□□□□ -0.61
RABGGTA-211ENST00000559850 CD300EQ496F6 205 aaPredicted RBP11.24□□□□□ -0.61
RABGGTA-211ENST00000559850 TM4SF20Q53R12 229 aa11.24□□□□□ -0.61
RABGGTA-211ENST00000559850 SPANXN2Q5MJ10 180 aa11.24□□□□□ -0.61
RABGGTA-211ENST00000559850 ZNF57Q68EA5 555 aaPredicted RBP11.24□□□□□ -0.61
RABGGTA-211ENST00000559850 TMED4Q7Z7H5 227 aa11.24□□□□□ -0.61
RABGGTA-211ENST00000559850 GPHB5Q86YW7 130 aa11.24□□□□□ -0.61
RABGGTA-211ENST00000559850 SLC35G3Q8N808 338 aa11.24□□□□□ -0.61
RABGGTA-211ENST00000559850 OR1P1Q8NH06 330 aa11.24□□□□□ -0.61
RABGGTA-211ENST00000559850 VN1R17PQ8TDU5 208 aa11.24□□□□□ -0.61
RABGGTA-211ENST00000559850 DYNLRB2Q8TF09 96 aa11.24□□□□□ -0.61
RABGGTA-211ENST00000559850 GPR146Q96CH1 333 aa11.24□□□□□ -0.61
RABGGTA-211ENST00000559850 CHRDL1Q9BU40 450 aa11.24□□□□□ -0.61
RABGGTA-211ENST00000559850 C21orf62Q9NYP8 219 aa11.24□□□□□ -0.61
RABGGTA-211ENST00000559850 LINC00854A0A1B0GVQ3 168 aa11.23□□□□□ -0.61
RABGGTA-211ENST00000559850 TMEM213A2RRL7 107 aa11.23□□□□□ -0.61
RABGGTA-211ENST00000559850 LGALS9O00182 355 aa11.23□□□□□ -0.61
RABGGTA-211ENST00000559850 HOXA1P49639 335 aaPredicted RBP11.23□□□□□ -0.61
RABGGTA-211ENST00000559850 SUPT4H1P63272 117 aaKnown RBP11.23□□□□□ -0.61
RABGGTA-211ENST00000559850 DHODHQ02127 395 aa11.23□□□□□ -0.61
RABGGTA-211ENST00000559850 DCTN2Q13561 401 aaKnown RBP11.23□□□□□ -0.61
RABGGTA-211ENST00000559850 TMEM187Q14656 261 aa11.23□□□□□ -0.61
RABGGTA-211ENST00000559850 BAK1Q16611 211 aa11.23□□□□□ -0.61
RABGGTA-211ENST00000559850 Q56UQ5 140 aa11.23□□□□□ -0.61
RABGGTA-211ENST00000559850 SGPP2Q8IWX5 399 aa11.23□□□□□ -0.61
RABGGTA-211ENST00000559850 Q8N1Y9 231 aa11.23□□□□□ -0.61
RABGGTA-211ENST00000559850 RBPMSQ93062 196 aaKnown RBP11.23□□□□□ -0.61
RABGGTA-211ENST00000559850 PINX1Q96BK5 328 aaKnown RBP11.23□□□□□ -0.61
RABGGTA-211ENST00000559850 PDCD10Q9BUL8 212 aa11.23□□□□□ -0.61
RABGGTA-211ENST00000559850 CACNG5Q9UF02 275 aa11.23□□□□□ -0.61
RABGGTA-211ENST00000559850 I3L2K1 104 aa11.22□□□□□ -0.61
RABGGTA-211ENST00000559850 B3GALNT1O75752 331 aa11.22□□□□□ -0.61
RABGGTA-211ENST00000559850 MT-CO2P00403 227 aa11.22□□□□□ -0.61
RABGGTA-211ENST00000559850 FRMD6-AS1P0C7T7 363 aa11.22□□□□□ -0.61
RABGGTA-211ENST00000559850 CBLN1P23435 193 aa11.22□□□□□ -0.61
RABGGTA-211ENST00000559850 ADMP35318 185 aa11.22□□□□□ -0.61
RABGGTA-211ENST00000559850 FAUP35544 74 aaKnown RBP11.22□□□□□ -0.61
RABGGTA-211ENST00000559850 AP3S2P59780 193 aa11.22□□□□□ -0.61
RABGGTA-211ENST00000559850 ERHP84090 104 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms