RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 SELENOKQ9Y6D0 94 aa9.17□□□□□ -0.94
SPG11-219ENST00000559822 OR4C46A6NHA9 309 aa9.16□□□□□ -0.94
SPG11-219ENST00000559822 K7EMT4 169 aa9.16□□□□□ -0.94
SPG11-219ENST00000559822 EIF4EP06730 217 aaKnown RBP9.16□□□□□ -0.94
SPG11-219ENST00000559822 UCP3P55916 312 aa9.16□□□□□ -0.94
SPG11-219ENST00000559822 RELQ04864 619 aaPredicted RBP9.16□□□□□ -0.94
SPG11-219ENST00000559822 H2BFWTQ7Z2G1 175 aa9.16□□□□□ -0.94
SPG11-219ENST00000559822 LYSMD2Q8IV50 215 aa9.16□□□□□ -0.94
SPG11-219ENST00000559822 OR1P1Q8NH06 330 aa9.16□□□□□ -0.94
SPG11-219ENST00000559822 OR4A16Q8NH70 328 aa9.16□□□□□ -0.94
SPG11-219ENST00000559822 C20orf24Q9BUV8 137 aa9.16□□□□□ -0.94
SPG11-219ENST00000559822 CSMD3Q7Z407 3707 aa9.15□□□□□ -0.94
SPG11-219ENST00000559822 C15orf62A8K5M9 175 aa9.15□□□□□ -0.94
SPG11-219ENST00000559822 K7EIM0 57 aa9.15□□□□□ -0.94
SPG11-219ENST00000559822 UBE2CO00762 179 aa9.15□□□□□ -0.94
SPG11-219ENST00000559822 NUPL2O15504 423 aaKnown RBP9.15□□□□□ -0.94
SPG11-219ENST00000559822 MFAP2P55001 183 aa9.15□□□□□ -0.94
SPG11-219ENST00000559822 MZT2AQ6P582 158 aa9.15□□□□□ -0.94
SPG11-219ENST00000559822 Q6ZWC4 215 aa9.15□□□□□ -0.94
SPG11-219ENST00000559822 TBC1D26Q86UD7 250 aa9.15□□□□□ -0.94
SPG11-219ENST00000559822 SNX29P2Q8IUI4 249 aa9.15□□□□□ -0.94
SPG11-219ENST00000559822 TXN2Q99757 166 aa9.15□□□□□ -0.94
SPG11-219ENST00000559822 CHRDL1Q9BU40 450 aa9.15□□□□□ -0.94
SPG11-219ENST00000559822 TP53TG1Q9Y2A0 90 aa9.15□□□□□ -0.94
SPG11-219ENST00000559822 IGHV3-21A0A0B4J1V1 117 aa9.14□□□□□ -0.95
SPG11-219ENST00000559822 FCGR2BP31994 310 aaPredicted RBP9.14□□□□□ -0.95
SPG11-219ENST00000559822 BMI1P35226 326 aa9.14□□□□□ -0.95
SPG11-219ENST00000559822 RORCP51449 518 aa9.14□□□□□ -0.95
SPG11-219ENST00000559822 NCS1P62166 190 aa9.14□□□□□ -0.95
SPG11-219ENST00000559822 ZNF114Q8NC26 417 aa9.14□□□□□ -0.95
SPG11-219ENST00000559822 AP3S1Q92572 193 aa9.14□□□□□ -0.95
SPG11-219ENST00000559822 ZNF486Q96H40 463 aaPredicted RBP9.14□□□□□ -0.95
SPG11-219ENST00000559822 SEC22AQ96IW7 307 aa9.14□□□□□ -0.95
SPG11-219ENST00000559822 OVOL2Q9BRP0 275 aa9.14□□□□□ -0.95
SPG11-219ENST00000559822 FUNDC2Q9BWH2 189 aa9.14□□□□□ -0.95
SPG11-219ENST00000559822 C6orf62Q9GZU0 229 aaPredicted RBP9.14□□□□□ -0.95
SPG11-219ENST00000559822 SACSQ9NZJ4 4579 aa9.13□□□□□ -0.95
SPG11-219ENST00000559822 KIR2DL5BA0A0G2JN68 375 aa9.13□□□□□ -0.95
SPG11-219ENST00000559822 KIR2DL5BA0A0G2JPC4 375 aa9.13□□□□□ -0.95
SPG11-219ENST00000559822 F8W735 103 aaPredicted RBP9.13□□□□□ -0.95
SPG11-219ENST00000559822 ATG12O94817 140 aa9.13□□□□□ -0.95
SPG11-219ENST00000559822 ADMP35318 185 aa9.13□□□□□ -0.95
SPG11-219ENST00000559822 MFAP4P55083 255 aa9.13□□□□□ -0.95
SPG11-219ENST00000559822 CMC4P56277 68 aaPredicted RBP9.13□□□□□ -0.95
SPG11-219ENST00000559822 HSPE1P61604 102 aaKnown RBP9.13□□□□□ -0.95
SPG11-219ENST00000559822 VBP1P61758 197 aa9.13□□□□□ -0.95
SPG11-219ENST00000559822 ERHP84090 104 aaKnown RBP9.13□□□□□ -0.95
SPG11-219ENST00000559822 PRCDQ00LT1 54 aa9.13□□□□□ -0.95
SPG11-219ENST00000559822 WFDC3Q8IUB2 231 aa9.13□□□□□ -0.95
SPG11-219ENST00000559822 KIR2DL5AQ8N109 375 aa9.13□□□□□ -0.95
SPG11-219ENST00000559822 STPG3Q8N7X2 389 aa9.13□□□□□ -0.95
SPG11-219ENST00000559822 KIR2DL5BQ8NHK3 375 aa9.13□□□□□ -0.95
SPG11-219ENST00000559822 MISP3Q96FF7 219 aa9.13□□□□□ -0.95
SPG11-219ENST00000559822 UBQLN2Q9UHD9 624 aa9.13□□□□□ -0.95
SPG11-219ENST00000559822 STARD9Q9P2P6 4700 aa9.12□□□□□ -0.95
SPG11-219ENST00000559822 DBX1A6NMT0 343 aa9.12□□□□□ -0.95
SPG11-219ENST00000559822 FAM25AB3EWG3 89 aa9.12□□□□□ -0.95
SPG11-219ENST00000559822 FAM25CB3EWG5 89 aa9.12□□□□□ -0.95
SPG11-219ENST00000559822 FAM25GB3EWG6 89 aa9.12□□□□□ -0.95
SPG11-219ENST00000559822 SPRY2O43597 315 aa9.12□□□□□ -0.95
SPG11-219ENST00000559822 GNG7O60262 68 aa9.12□□□□□ -0.95
SPG11-219ENST00000559822 HPGDSO60760 199 aa9.12□□□□□ -0.95
SPG11-219ENST00000559822 YIF1AO95070 293 aa9.12□□□□□ -0.95
SPG11-219ENST00000559822 CD5P06127 495 aa9.12□□□□□ -0.95
SPG11-219ENST00000559822 CTSGP08311 255 aa9.12□□□□□ -0.95
SPG11-219ENST00000559822 ELK1P19419 428 aa9.12□□□□□ -0.95
SPG11-219ENST00000559822 TBPP20226 339 aa9.12□□□□□ -0.95
SPG11-219ENST00000559822 RNASE10Q5GAN6 216 aaKnown RBP9.12□□□□□ -0.95
SPG11-219ENST00000559822 ARRDC1Q8N5I2 433 aa9.12□□□□□ -0.95
SPG11-219ENST00000559822 C15orf40Q8WUR7 153 aa9.12□□□□□ -0.95
SPG11-219ENST00000559822 MRGPRFQ96AM1 343 aa9.12□□□□□ -0.95
SPG11-219ENST00000559822 GALNT14Q96FL9 552 aa9.12□□□□□ -0.95
SPG11-219ENST00000559822 GINS3Q9BRX5 216 aa9.12□□□□□ -0.95
SPG11-219ENST00000559822 SMPXQ9UHP9 88 aa9.12□□□□□ -0.95
SPG11-219ENST00000559822 IGHV3OR16-8A0A075B7F1 116 aa9.11□□□□□ -0.95
SPG11-219ENST00000559822 TRAV14DV4A0A0A6YYC5 116 aa9.11□□□□□ -0.95
SPG11-219ENST00000559822 IGHV7-4-1A0A0J9YVY3 117 aa9.11□□□□□ -0.95
SPG11-219ENST00000559822 I3L2K1 104 aa9.11□□□□□ -0.95
SPG11-219ENST00000559822 ZNF207O43670 478 aaKnown RBP9.11□□□□□ -0.95
SPG11-219ENST00000559822 MT-CO2P00403 227 aa9.11□□□□□ -0.95
SPG11-219ENST00000559822 CTSDP07339 412 aaPredicted RBP9.11□□□□□ -0.95
SPG11-219ENST00000559822 PGAM2P15259 253 aa9.11□□□□□ -0.95
SPG11-219ENST00000559822 SNCAP37840 140 aa9.11□□□□□ -0.95
SPG11-219ENST00000559822 NPBWR1P48145 328 aa9.11□□□□□ -0.95
SPG11-219ENST00000559822 AKR1C2P52895 323 aa9.11□□□□□ -0.95
SPG11-219ENST00000559822 RND3P61587 244 aa9.11□□□□□ -0.95
SPG11-219ENST00000559822 PAFAH1B2P68402 229 aa9.11□□□□□ -0.95
SPG11-219ENST00000559822 TNFRSF9Q07011 255 aa9.11□□□□□ -0.95
SPG11-219ENST00000559822 DEFB135Q30KP9 77 aa9.11□□□□□ -0.95
SPG11-219ENST00000559822 ODF3L2Q3SX64 289 aa9.11□□□□□ -0.95
SPG11-219ENST00000559822 TMEM217Q8N7C4 229 aa9.11□□□□□ -0.95
SPG11-219ENST00000559822 TMEM116Q8NCL8 245 aa9.11□□□□□ -0.95
SPG11-219ENST00000559822 PINX1Q96BK5 328 aaKnown RBP9.11□□□□□ -0.95
SPG11-219ENST00000559822 OR10C1Q96KK4 312 aa9.11□□□□□ -0.95
SPG11-219ENST00000559822 PDCD10Q9BUL8 212 aa9.11□□□□□ -0.95
SPG11-219ENST00000559822 RHPN1-AS1Q9BWJ2 59 aa9.11□□□□□ -0.95
SPG11-219ENST00000559822 NXF2Q9GZY0 626 aaKnown RBP9.11□□□□□ -0.95
SPG11-219ENST00000559822 CXorf65A6NEN9 183 aa9.1□□□□□ -0.95
SPG11-219ENST00000559822 NUPR2A6NF83 97 aa9.1□□□□□ -0.95
SPG11-219ENST00000559822 M0QYG6 137 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms