RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 CNBD2Q96M20 576 aa0.28□□□□□ -2.36
CASC4-210ENST00000559550 SLC50A1Q9BRV3 221 aa0.28□□□□□ -2.36
CASC4-210ENST00000559550 APCP25054 2843 aa0.27□□□□□ -2.37
CASC4-210ENST00000559550 TRBV20OR9-2A0A075B6H5 130 aa0.27□□□□□ -2.37
CASC4-210ENST00000559550 CXCR6O00574 342 aa0.27□□□□□ -2.37
CASC4-210ENST00000559550 OR5F1O95221 314 aa0.27□□□□□ -2.37
CASC4-210ENST00000559550 C8orf88P0DMB2 117 aa0.27□□□□□ -2.37
CASC4-210ENST00000559550 BRS3P32247 399 aa0.27□□□□□ -2.37
CASC4-210ENST00000559550 MARCKSL1P49006 195 aa0.27□□□□□ -2.37
CASC4-210ENST00000559550 CAV1Q03135 178 aa0.27□□□□□ -2.37
CASC4-210ENST00000559550 BATFQ16520 125 aa0.27□□□□□ -2.37
CASC4-210ENST00000559550 AADACL3Q5VUY0 350 aa0.27□□□□□ -2.37
CASC4-210ENST00000559550 SBSPONQ8IVN8 264 aa0.27□□□□□ -2.37
CASC4-210ENST00000559550 TMEM156Q8N614 296 aa0.27□□□□□ -2.37
CASC4-210ENST00000559550 Q8N6K4 173 aa0.27□□□□□ -2.37
CASC4-210ENST00000559550 OR2T4Q8NH00 348 aa0.27□□□□□ -2.37
CASC4-210ENST00000559550 PFN4Q8NHR9 129 aa0.27□□□□□ -2.37
CASC4-210ENST00000559550 RASSF5Q8WWW0 418 aa0.27□□□□□ -2.37
CASC4-210ENST00000559550 KLK6Q92876 244 aa0.27□□□□□ -2.37
CASC4-210ENST00000559550 LINC00526Q96FQ7 95 aa0.27□□□□□ -2.37
CASC4-210ENST00000559550 DERL1Q9BUN8 251 aa0.27□□□□□ -2.37
CASC4-210ENST00000559550 KLK9Q9UKQ9 250 aa0.27□□□□□ -2.37
CASC4-210ENST00000559550 ZNF462Q96JM2 2506 aa0.27□□□□□ -2.37
CASC4-210ENST00000559550 CCDC88AQ3V6T2 1871 aa0.27□□□□□ -2.37
CASC4-210ENST00000559550 KMT2DO14686 5537 aa0.26□□□□□ -2.37
CASC4-210ENST00000559550 FUOMA2VDF0 154 aa0.26□□□□□ -2.37
CASC4-210ENST00000559550 ACOX3O15254 700 aa0.26□□□□□ -2.37
CASC4-210ENST00000559550 OR2T1O43869 369 aa0.26□□□□□ -2.37
CASC4-210ENST00000559550 HTR1AP08908 422 aa0.26□□□□□ -2.37
CASC4-210ENST00000559550 SPI1P17947 270 aa0.26□□□□□ -2.37
CASC4-210ENST00000559550 COQ5Q5HYK3 327 aa0.26□□□□□ -2.37
CASC4-210ENST00000559550 SFXN4Q6P4A7 337 aa0.26□□□□□ -2.37
CASC4-210ENST00000559550 LINC00471Q8N535 108 aa0.26□□□□□ -2.37
CASC4-210ENST00000559550 LINC00311Q8N616 119 aa0.26□□□□□ -2.37
CASC4-210ENST00000559550 CKLFQ9UBR5 152 aa0.26□□□□□ -2.37
CASC4-210ENST00000559550 TP73-AS1Q9UF72 201 aa0.26□□□□□ -2.37
CASC4-210ENST00000559550 C3orf18Q9UK00 162 aa0.26□□□□□ -2.37
CASC4-210ENST00000559550 ABCC11Q96J66 1382 aa0.26□□□□□ -2.37
CASC4-210ENST00000559550 DCCP43146 1447 aa0.26□□□□□ -2.37
CASC4-210ENST00000559550 ANAPC1Q9H1A4 1944 aa0.26□□□□□ -2.37
CASC4-210ENST00000559550 RALGAPA2Q2PPJ7 1873 aa0.25□□□□□ -2.37
CASC4-210ENST00000559550 IGKV1-5P01602 117 aa0.25□□□□□ -2.37
CASC4-210ENST00000559550 RPS12P25398 132 aaKnown RBP0.25□□□□□ -2.37
CASC4-210ENST00000559550 NAA20P61599 178 aa0.25□□□□□ -2.37
CASC4-210ENST00000559550 STX5Q13190 355 aa0.25□□□□□ -2.37
CASC4-210ENST00000559550 PDE6HQ13956 83 aa0.25□□□□□ -2.37
CASC4-210ENST00000559550 GRK1Q15835 563 aa0.25□□□□□ -2.37
CASC4-210ENST00000559550 CLVS2Q5SYC1 327 aa0.25□□□□□ -2.37
CASC4-210ENST00000559550 BPIFA4PQ86YQ2 179 aa0.25□□□□□ -2.37
CASC4-210ENST00000559550 C1orf158Q8N1D5 194 aa0.25□□□□□ -2.37
CASC4-210ENST00000559550 Q8N814 137 aa0.25□□□□□ -2.37
CASC4-210ENST00000559550 OR4D11Q8NGI4 311 aa0.25□□□□□ -2.37
CASC4-210ENST00000559550 ZNF418Q8TF45 676 aaPredicted RBP0.25□□□□□ -2.37
CASC4-210ENST00000559550 WDR61Q9GZS3 305 aaKnown RBP0.25□□□□□ -2.37
CASC4-210ENST00000559550 FAM96AQ9H5X1 160 aa0.25□□□□□ -2.37
CASC4-210ENST00000559550 CNTRLQ7Z7A1 2325 aa0.25□□□□□ -2.37
CASC4-210ENST00000559550 TRAV1-1A0A0B4J248 108 aa0.24□□□□□ -2.37
CASC4-210ENST00000559550 OR1I1O60431 355 aa0.24□□□□□ -2.37
CASC4-210ENST00000559550 HYPMO75409 117 aa0.24□□□□□ -2.37
CASC4-210ENST00000559550 CNBPP62633 177 aaKnown RBP0.24□□□□□ -2.37
CASC4-210ENST00000559550 MED21Q13503 144 aa0.24□□□□□ -2.37
CASC4-210ENST00000559550 LRRN1Q6UXK5 716 aa0.24□□□□□ -2.37
CASC4-210ENST00000559550 GPR32P1Q8NGA4 272 aa0.24□□□□□ -2.37
CASC4-210ENST00000559550 SCGB3A1Q96QR1 104 aa0.24□□□□□ -2.37
CASC4-210ENST00000559550 OR51I1Q9H343 314 aa0.24□□□□□ -2.37
CASC4-210ENST00000559550 EML5Q05BV3 1969 aa0.24□□□□□ -2.37
CASC4-210ENST00000559550 M0QX08 132 aa0.23□□□□□ -2.37
CASC4-210ENST00000559550 M0QZ92 97 aa0.23□□□□□ -2.37
CASC4-210ENST00000559550 M0R2N4 97 aa0.23□□□□□ -2.37
CASC4-210ENST00000559550 UCHL3P15374 230 aa0.23□□□□□ -2.37
CASC4-210ENST00000559550 HIST1H2BOP23527 126 aa0.23□□□□□ -2.37
CASC4-210ENST00000559550 HIST1H2BBP33778 126 aa0.23□□□□□ -2.37
CASC4-210ENST00000559550 HIST1H2BDP58876 126 aa0.23□□□□□ -2.37
CASC4-210ENST00000559550 RAB4BP61018 213 aa0.23□□□□□ -2.37
CASC4-210ENST00000559550 HIST1H2BCP62807 126 aa0.23□□□□□ -2.37
CASC4-210ENST00000559550 HIST2H2BEQ16778 126 aa0.23□□□□□ -2.37
CASC4-210ENST00000559550 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.23□□□□□ -2.37
CASC4-210ENST00000559550 GDF5OSQ5U4N7 250 aa0.23□□□□□ -2.37
CASC4-210ENST00000559550 ALKAL1Q6UXT8 129 aa0.23□□□□□ -2.37
CASC4-210ENST00000559550 DEFB128Q7Z7B8 93 aa0.23□□□□□ -2.37
CASC4-210ENST00000559550 OOSP2Q86WS3 158 aa0.23□□□□□ -2.37
CASC4-210ENST00000559550 CLVS1Q8IUQ0 354 aaPredicted RBP0.23□□□□□ -2.37
CASC4-210ENST00000559550 IQCF2Q8IXL9 164 aa0.23□□□□□ -2.37
CASC4-210ENST00000559550 PIGXQ8TBF5 258 aa0.23□□□□□ -2.37
CASC4-210ENST00000559550 RAB8BQ92930 207 aa0.23□□□□□ -2.37
CASC4-210ENST00000559550 HIST1H2BHQ93079 126 aa0.23□□□□□ -2.37
CASC4-210ENST00000559550 HIST1H2BNQ99877 126 aa0.23□□□□□ -2.37
CASC4-210ENST00000559550 HIST1H2BMQ99879 126 aa0.23□□□□□ -2.37
CASC4-210ENST00000559550 XPNPEP1Q9NQW7 623 aa0.23□□□□□ -2.37
CASC4-210ENST00000559550 CMTM6Q9NX76 183 aa0.23□□□□□ -2.37
CASC4-210ENST00000559550 EVC2Q86UK5 1308 aa0.22□□□□□ -2.37
CASC4-210ENST00000559550 FAT4Q6V0I7 4981 aa0.22□□□□□ -2.37
CASC4-210ENST00000559550 TRBV6-8A0A0A6YYG3 113 aa0.22□□□□□ -2.37
CASC4-210ENST00000559550 LINC00854A0A1B0GVQ3 168 aa0.22□□□□□ -2.37
CASC4-210ENST00000559550 H0Y980 276 aa0.22□□□□□ -2.37
CASC4-210ENST00000559550 MYL12AP19105 171 aa0.22□□□□□ -2.37
CASC4-210ENST00000559550 SSR2P43308 183 aa0.22□□□□□ -2.37
CASC4-210ENST00000559550 IFITM2Q01629 132 aa0.22□□□□□ -2.37
CASC4-210ENST00000559550 KCNJ8Q15842 424 aa0.22□□□□□ -2.37
CASC4-210ENST00000559550 SPANXN3Q5MJ09 141 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms