RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 SLC35B1P78383 322 aa11.53□□□□□ -0.56
SNRPA1-207ENST00000559309 FCN2Q15485 313 aa11.53□□□□□ -0.56
SNRPA1-207ENST00000559309 GSG1LQ6UXU4 331 aa11.53□□□□□ -0.56
SNRPA1-207ENST00000559309 C19orf35Q6ZS72 473 aa11.53□□□□□ -0.56
SNRPA1-207ENST00000559309 ZNF329Q86UD4 541 aa11.53□□□□□ -0.56
SNRPA1-207ENST00000559309 UXS1Q8NBZ7 420 aa11.53□□□□□ -0.56
SNRPA1-207ENST00000559309 OR5AU1Q8NGC0 362 aa11.53□□□□□ -0.56
SNRPA1-207ENST00000559309 WDR89Q96FK6 387 aaPredicted RBP11.53□□□□□ -0.56
SNRPA1-207ENST00000559309 P2RX4Q99571 388 aa11.53□□□□□ -0.56
SNRPA1-207ENST00000559309 KLK15Q9H2R5 256 aa11.53□□□□□ -0.56
SNRPA1-207ENST00000559309 SLA2Q9H6Q3 261 aa11.53□□□□□ -0.56
SNRPA1-207ENST00000559309 PLEKHA3Q9HB20 300 aa11.53□□□□□ -0.56
SNRPA1-207ENST00000559309 RCL1Q9Y2P8 373 aaKnown RBP11.53□□□□□ -0.56
SNRPA1-207ENST00000559309 SIX6O95475 246 aa11.52□□□□□ -0.57
SNRPA1-207ENST00000559309 LY86O95711 162 aa11.52□□□□□ -0.57
SNRPA1-207ENST00000559309 APELAP0DMC3 54 aa11.52□□□□□ -0.57
SNRPA1-207ENST00000559309 OR13C7P0DN81 318 aa11.52□□□□□ -0.57
SNRPA1-207ENST00000559309 NKX2-1P43699 371 aaPredicted RBP11.52□□□□□ -0.57
SNRPA1-207ENST00000559309 RAB9AP51151 201 aa11.52□□□□□ -0.57
SNRPA1-207ENST00000559309 C11orf87Q6NUJ2 197 aa11.52□□□□□ -0.57
SNRPA1-207ENST00000559309 CENPVQ7Z7K6 275 aaPredicted RBP11.52□□□□□ -0.57
SNRPA1-207ENST00000559309 OR5T1Q8NG75 326 aa11.52□□□□□ -0.57
SNRPA1-207ENST00000559309 OR1P1Q8NH06 330 aa11.52□□□□□ -0.57
SNRPA1-207ENST00000559309 DTD1Q8TEA8 209 aa11.52□□□□□ -0.57
SNRPA1-207ENST00000559309 ASB13Q8WXK3 278 aa11.52□□□□□ -0.57
SNRPA1-207ENST00000559309 PDCD10Q9BUL8 212 aa11.52□□□□□ -0.57
SNRPA1-207ENST00000559309 ZNF747Q9BV97 191 aa11.52□□□□□ -0.57
SNRPA1-207ENST00000559309 MGAT4CQ9UBM8 478 aa11.52□□□□□ -0.57
SNRPA1-207ENST00000559309 C13orf42A0A1B0GVH6 325 aa11.51□□□□□ -0.57
SNRPA1-207ENST00000559309 ATP5IP56385 69 aaPredicted RBP11.51□□□□□ -0.57
SNRPA1-207ENST00000559309 TAS2R30P59541 319 aa11.51□□□□□ -0.57
SNRPA1-207ENST00000559309 POLR2GP62487 172 aaKnown RBP eCLIP11.51□□□□□ -0.57
SNRPA1-207ENST00000559309 CYCSP99999 105 aaKnown RBP11.51□□□□□ -0.57
SNRPA1-207ENST00000559309 C2orf83Q53S99 150 aa11.51□□□□□ -0.57
SNRPA1-207ENST00000559309 SPINK9Q5DT21 86 aa11.51□□□□□ -0.57
SNRPA1-207ENST00000559309 ARSJQ5FYB0 599 aaPredicted RBP11.51□□□□□ -0.57
SNRPA1-207ENST00000559309 ZNF491Q8N8L2 437 aa11.51□□□□□ -0.57
SNRPA1-207ENST00000559309 OR1L6Q8NGR2 347 aa11.51□□□□□ -0.57
SNRPA1-207ENST00000559309 ABHD5Q8WTS1 349 aa11.51□□□□□ -0.57
SNRPA1-207ENST00000559309 MED28Q9H204 178 aa11.51□□□□□ -0.57
SNRPA1-207ENST00000559309 C5orf51A6NDU8 294 aa11.5□□□□□ -0.57
SNRPA1-207ENST00000559309 PRSS46E5RG02 174 aa11.5□□□□□ -0.57
SNRPA1-207ENST00000559309 K7EPK0 472 aa11.5□□□□□ -0.57
SNRPA1-207ENST00000559309 MED6O75586 246 aa11.5□□□□□ -0.57
SNRPA1-207ENST00000559309 RPLP1P05386 114 aaKnown RBP11.5□□□□□ -0.57
SNRPA1-207ENST00000559309 REG1AP05451 166 aa11.5□□□□□ -0.57
SNRPA1-207ENST00000559309 CD28P10747 220 aa11.5□□□□□ -0.57
SNRPA1-207ENST00000559309 CDX1P47902 265 aaPredicted RBP11.5□□□□□ -0.57
SNRPA1-207ENST00000559309 ERHP84090 104 aaKnown RBP11.5□□□□□ -0.57
SNRPA1-207ENST00000559309 MRPL41Q8IXM3 137 aaKnown RBP11.5□□□□□ -0.57
SNRPA1-207ENST00000559309 SMIM8Q96KF7 97 aa11.5□□□□□ -0.57
SNRPA1-207ENST00000559309 UBE2E2Q96LR5 201 aa11.5□□□□□ -0.57
SNRPA1-207ENST00000559309 CIB3Q96Q77 187 aaPredicted RBP11.5□□□□□ -0.57
SNRPA1-207ENST00000559309 HINT2Q9BX68 163 aa11.5□□□□□ -0.57
SNRPA1-207ENST00000559309 U3KQ87 197 aa11.5□□□□□ -0.57
SNRPA1-207ENST00000559309 MGAM2Q2M2H8 2515 aa11.49□□□□□ -0.57
SNRPA1-207ENST00000559309 C15orf62A8K5M9 175 aa11.49□□□□□ -0.57
SNRPA1-207ENST00000559309 PMS2P5A8MQ11 134 aa11.49□□□□□ -0.57
SNRPA1-207ENST00000559309 CEBPZOSA8MTT3 80 aa11.49□□□□□ -0.57
SNRPA1-207ENST00000559309 G3V3Q6 166 aa11.49□□□□□ -0.57
SNRPA1-207ENST00000559309 H0YIZ8 118 aa11.49□□□□□ -0.57
SNRPA1-207ENST00000559309 NXPH3O95157 252 aa11.49□□□□□ -0.57
SNRPA1-207ENST00000559309 LYL1P12980 280 aa11.49□□□□□ -0.57
SNRPA1-207ENST00000559309 HIST1H1BP16401 226 aaKnown RBP11.49□□□□□ -0.57
SNRPA1-207ENST00000559309 HTR2BP41595 481 aa11.49□□□□□ -0.57
SNRPA1-207ENST00000559309 HOXA1P49639 335 aaPredicted RBP11.49□□□□□ -0.57
SNRPA1-207ENST00000559309 RUNX1Q01196 453 aa11.49□□□□□ -0.57
SNRPA1-207ENST00000559309 RAB32Q13637 225 aa11.49□□□□□ -0.57
SNRPA1-207ENST00000559309 NECAP1Q8NC96 275 aa11.49□□□□□ -0.57
SNRPA1-207ENST00000559309 OR4X2Q8NGF9 303 aa11.49□□□□□ -0.57
SNRPA1-207ENST00000559309 RAB40CQ96S21 281 aa11.49□□□□□ -0.57
SNRPA1-207ENST00000559309 ZNF436Q9C0F3 470 aaPredicted RBP11.49□□□□□ -0.57
SNRPA1-207ENST00000559309 MAGT1Q9H0U3 335 aa11.49□□□□□ -0.57
SNRPA1-207ENST00000559309 ZFP57Q9NU63 452 aa11.49□□□□□ -0.57
SNRPA1-207ENST00000559309 GSKIPQ9P0R6 139 aa11.49□□□□□ -0.57
SNRPA1-207ENST00000559309 TRRAPQ9Y4A5 3859 aa11.48□□□□□ -0.57
SNRPA1-207ENST00000559309 FAM223BA6NKX1 122 aa11.48□□□□□ -0.57
SNRPA1-207ENST00000559309 FAM25EA8MYX2 175 aa11.48□□□□□ -0.57
SNRPA1-207ENST00000559309 I3L2K1 104 aa11.48□□□□□ -0.57
SNRPA1-207ENST00000559309 K7EIM0 57 aa11.48□□□□□ -0.57
SNRPA1-207ENST00000559309 PRH1P02810 166 aa11.48□□□□□ -0.57
SNRPA1-207ENST00000559309 GIPP09681 153 aaPredicted RBP11.48□□□□□ -0.57
SNRPA1-207ENST00000559309 FCGR2BP31994 310 aaPredicted RBP11.48□□□□□ -0.57
SNRPA1-207ENST00000559309 TMEM14EPQ6UXP3 125 aa11.48□□□□□ -0.57
SNRPA1-207ENST00000559309 LCNL1Q6ZST4 164 aa11.48□□□□□ -0.57
SNRPA1-207ENST00000559309 FAM223AQ8IWN6 122 aa11.48□□□□□ -0.57
SNRPA1-207ENST00000559309 SLC24A4Q8NFF2 622 aa11.48□□□□□ -0.57
SNRPA1-207ENST00000559309 PPP1R1CQ8WVI7 109 aa11.48□□□□□ -0.57
SNRPA1-207ENST00000559309 USMG5Q96IX5 58 aa11.48□□□□□ -0.57
SNRPA1-207ENST00000559309 ATP6V0BQ99437 205 aa11.48□□□□□ -0.57
SNRPA1-207ENST00000559309 RNF126Q9BV68 326 aa11.48□□□□□ -0.57
SNRPA1-207ENST00000559309 HIPK2Q9H2X6 1198 aa11.48□□□□□ -0.57
SNRPA1-207ENST00000559309 HEYLQ9NQ87 328 aaPredicted RBP11.48□□□□□ -0.57
SNRPA1-207ENST00000559309 F8W735 103 aaPredicted RBP11.47□□□□□ -0.57
SNRPA1-207ENST00000559309 I3L521 148 aa11.47□□□□□ -0.57
SNRPA1-207ENST00000559309 TSC22D2O75157 780 aa11.47□□□□□ -0.57
SNRPA1-207ENST00000559309 DEDDO75618 318 aa11.47□□□□□ -0.57
SNRPA1-207ENST00000559309 NDUFB8O95169 186 aa11.47□□□□□ -0.57
SNRPA1-207ENST00000559309 RPL23AP62750 156 aaKnown RBP11.47□□□□□ -0.57
SNRPA1-207ENST00000559309 RHOGP84095 191 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 142.4 ms