RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 COMMD5Q9GZQ3 224 aa5.52□□□□□ -1.53
SPG11-213ENST00000558988 AUNIPQ9H7T9 357 aa5.52□□□□□ -1.53
SPG11-213ENST00000558988 SLC2A9Q9NRM0 540 aa5.52□□□□□ -1.53
SPG11-213ENST00000558988 NPIPB5A8MRT5 1133 aa5.51□□□□□ -1.53
SPG11-213ENST00000558988 OR11H12B2RN74 326 aa5.51□□□□□ -1.53
SPG11-213ENST00000558988 AIREO43918 545 aa5.51□□□□□ -1.53
SPG11-213ENST00000558988 BRI3O95415 125 aa5.51□□□□□ -1.53
SPG11-213ENST00000558988 ZNF735P0CB33 412 aa5.51□□□□□ -1.53
SPG11-213ENST00000558988 CBLN1P23435 193 aa5.51□□□□□ -1.53
SPG11-213ENST00000558988 MAS1LP35410 378 aa5.51□□□□□ -1.53
SPG11-213ENST00000558988 RFX2P48378 723 aa5.51□□□□□ -1.53
SPG11-213ENST00000558988 EIF4EBP1Q13541 118 aaPredicted RBP5.51□□□□□ -1.53
SPG11-213ENST00000558988 DEFB114Q30KQ6 69 aa5.51□□□□□ -1.53
SPG11-213ENST00000558988 FAM106AQ4KMX7 169 aa5.51□□□□□ -1.53
SPG11-213ENST00000558988 RNASE12Q5GAN4 147 aaKnown RBP5.51□□□□□ -1.53
SPG11-213ENST00000558988 TMEM69Q5SWH9 247 aa5.51□□□□□ -1.53
SPG11-213ENST00000558988 ZNF57Q68EA5 555 aaPredicted RBP5.51□□□□□ -1.53
SPG11-213ENST00000558988 BTNL8Q6UX41 500 aa5.51□□□□□ -1.53
SPG11-213ENST00000558988 ZNF818PQ6ZRF7 136 aa5.51□□□□□ -1.53
SPG11-213ENST00000558988 TMEM61Q8N0U2 210 aa5.51□□□□□ -1.53
SPG11-213ENST00000558988 UBAC2Q8NBM4 344 aa5.51□□□□□ -1.53
SPG11-213ENST00000558988 UXS1Q8NBZ7 420 aa5.51□□□□□ -1.53
SPG11-213ENST00000558988 TSPAN14Q8NG11 270 aa5.51□□□□□ -1.53
SPG11-213ENST00000558988 OR5AP2Q8NGF4 316 aa5.51□□□□□ -1.53
SPG11-213ENST00000558988 OR10W1Q8NGF6 305 aa5.51□□□□□ -1.53
SPG11-213ENST00000558988 ZNF2Q9BSG1 426 aaPredicted RBP5.51□□□□□ -1.53
SPG11-213ENST00000558988 THAP7Q9BT49 309 aaPredicted RBP5.51□□□□□ -1.53
SPG11-213ENST00000558988 NSG2Q9Y328 171 aa5.51□□□□□ -1.53
SPG11-213ENST00000558988 TENM3Q9P273 2699 aa5.51□□□□□ -1.53
SPG11-213ENST00000558988 STAB2Q8WWQ8 2551 aa5.5□□□□□ -1.53
SPG11-213ENST00000558988 IGLC7A0M8Q6 106 aa5.5□□□□□ -1.53
SPG11-213ENST00000558988 RBMY1BA6NDE4 496 aaKnown RBP5.5□□□□□ -1.53
SPG11-213ENST00000558988 RBMY1EA6NEQ0 496 aaKnown RBP5.5□□□□□ -1.53
SPG11-213ENST00000558988 OR2T8A6NH00 312 aa5.5□□□□□ -1.53
SPG11-213ENST00000558988 ZNF785A8K8V0 405 aa5.5□□□□□ -1.53
SPG11-213ENST00000558988 A8MZ25 164 aa5.5□□□□□ -1.53
SPG11-213ENST00000558988 UPK2O00526 184 aa5.5□□□□□ -1.53
SPG11-213ENST00000558988 ZNF207O43670 478 aaKnown RBP5.5□□□□□ -1.53
SPG11-213ENST00000558988 CLEC3BP05452 202 aa5.5□□□□□ -1.53
SPG11-213ENST00000558988 RBMY1DP0C7P1 496 aaKnown RBP5.5□□□□□ -1.53
SPG11-213ENST00000558988 OR13C7P0DN81 318 aa5.5□□□□□ -1.53
SPG11-213ENST00000558988 NQO2P16083 231 aa5.5□□□□□ -1.53
SPG11-213ENST00000558988 HIST1H1BP16401 226 aaKnown RBP5.5□□□□□ -1.53
SPG11-213ENST00000558988 CTRB1P17538 263 aa5.5□□□□□ -1.53
SPG11-213ENST00000558988 HLA-DMAP28067 261 aa5.5□□□□□ -1.53
SPG11-213ENST00000558988 CBX5P45973 191 aa5.5□□□□□ -1.53
SPG11-213ENST00000558988 TAS2R20P59543 309 aa5.5□□□□□ -1.53
SPG11-213ENST00000558988 OR2B8PP59922 312 aa5.5□□□□□ -1.53
SPG11-213ENST00000558988 ZNF585BQ52M93 769 aa5.5□□□□□ -1.53
SPG11-213ENST00000558988 PHLDA2Q53GA4 152 aa5.5□□□□□ -1.53
SPG11-213ENST00000558988 CTRB2Q6GPI1 263 aa5.5□□□□□ -1.53
SPG11-213ENST00000558988 SLC25A24Q6NUK1 477 aa5.5□□□□□ -1.53
SPG11-213ENST00000558988 PLET1Q6UQ28 207 aa5.5□□□□□ -1.53
SPG11-213ENST00000558988 UNQ9165/PRO28630Q6UXU0 137 aa5.5□□□□□ -1.53
SPG11-213ENST00000558988 SLC16A13Q7RTY0 426 aa5.5□□□□□ -1.53
SPG11-213ENST00000558988 OR52B4Q8NGK2 314 aa5.5□□□□□ -1.53
SPG11-213ENST00000558988 OR2K2Q8NGT1 345 aa5.5□□□□□ -1.53
SPG11-213ENST00000558988 OR5H2Q8NGV7 314 aa5.5□□□□□ -1.53
SPG11-213ENST00000558988 OR4A5Q8NH83 315 aa5.5□□□□□ -1.53
SPG11-213ENST00000558988 S100A16Q96FQ6 103 aaKnown RBP5.5□□□□□ -1.53
SPG11-213ENST00000558988 AIFM2Q9BRQ8 373 aa5.5□□□□□ -1.53
SPG11-213ENST00000558988 C20orf24Q9BUV8 137 aa5.5□□□□□ -1.53
SPG11-213ENST00000558988 HIPK2Q9H2X6 1198 aa5.5□□□□□ -1.53
SPG11-213ENST00000558988 EDA2RQ9HAV5 297 aa5.5□□□□□ -1.53
SPG11-213ENST00000558988 VCX3AQ9NNX9 186 aa5.5□□□□□ -1.53
SPG11-213ENST00000558988 SIGLEC8Q9NYZ4 499 aa5.5□□□□□ -1.53
SPG11-213ENST00000558988 MLXQ9UH92 298 aa5.5□□□□□ -1.53
SPG11-213ENST00000558988 IGLV11-55A0A075B6I3 123 aa5.49□□□□□ -1.53
SPG11-213ENST00000558988 A0A0A6YYH2 397 aa5.49□□□□□ -1.53
SPG11-213ENST00000558988 TRBV7-1A0A0A6YYK4 115 aa5.49□□□□□ -1.53
SPG11-213ENST00000558988 LCE6AA0A183 80 aa5.49□□□□□ -1.53
SPG11-213ENST00000558988 TMEM213A2RRL7 107 aa5.49□□□□□ -1.53
SPG11-213ENST00000558988 A6NJ64 397 aa5.49□□□□□ -1.53
SPG11-213ENST00000558988 XRCC3O43542 346 aa5.49□□□□□ -1.53
SPG11-213ENST00000558988 SNAPC5O75971 98 aa5.49□□□□□ -1.53
SPG11-213ENST00000558988 HPRT1P00492 218 aa5.49□□□□□ -1.53
SPG11-213ENST00000558988 KRASP01116 189 aa5.49□□□□□ -1.53
SPG11-213ENST00000558988 TRAPPC2P0DI81 140 aa5.49□□□□□ -1.53
SPG11-213ENST00000558988 TRAPPC2BP0DI82 140 aa5.49□□□□□ -1.53
SPG11-213ENST00000558988 GNRHRP30968 328 aa5.49□□□□□ -1.53
SPG11-213ENST00000558988 HRH1P35367 487 aa5.49□□□□□ -1.53
SPG11-213ENST00000558988 G6PCP35575 357 aa5.49□□□□□ -1.53
SPG11-213ENST00000558988 LPAR6P43657 344 aa5.49□□□□□ -1.53
SPG11-213ENST00000558988 TAS2R31P59538 309 aa5.49□□□□□ -1.53
SPG11-213ENST00000558988 TSPAN5P62079 268 aa5.49□□□□□ -1.53
SPG11-213ENST00000558988 KCTD21Q4G0X4 260 aa5.49□□□□□ -1.53
SPG11-213ENST00000558988 Q56UQ5 140 aa5.49□□□□□ -1.53
SPG11-213ENST00000558988 UBE2NLQ5JXB2 153 aa5.49□□□□□ -1.53
SPG11-213ENST00000558988 RBPMS2Q6ZRY4 209 aaKnown RBP5.49□□□□□ -1.53
SPG11-213ENST00000558988 GPHB5Q86YW7 130 aa5.49□□□□□ -1.53
SPG11-213ENST00000558988 SNX29P2Q8IUI4 249 aa5.49□□□□□ -1.53
SPG11-213ENST00000558988 GIMAP1Q8WWP7 306 aa5.49□□□□□ -1.53
SPG11-213ENST00000558988 FCAMRQ8WWV6 532 aa5.49□□□□□ -1.53
SPG11-213ENST00000558988 CXorf58Q96LI9 332 aa5.49□□□□□ -1.53
SPG11-213ENST00000558988 QTRT1Q9BXR0 403 aaKnown RBP5.49□□□□□ -1.53
SPG11-213ENST00000558988 BET1LQ9NYM9 111 aa5.49□□□□□ -1.53
SPG11-213ENST00000558988 TECRQ9NZ01 308 aaKnown RBP5.49□□□□□ -1.53
SPG11-213ENST00000558988 COMMD3Q9UBI1 195 aa5.49□□□□□ -1.53
SPG11-213ENST00000558988 UBQLN2Q9UHD9 624 aa5.49□□□□□ -1.53
SPG11-213ENST00000558988 OR51B2Q9Y5P1 312 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms