RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 RPL8P62917 257 aaKnown RBP7.1□□□□□ -1.27
SPG11-212ENST00000558790 SLC38A6Q8IZM9 456 aa7.1□□□□□ -1.27
SPG11-212ENST00000558790 KIR2DL5AQ8N109 375 aa7.1□□□□□ -1.27
SPG11-212ENST00000558790 KIR2DL5BQ8NHK3 375 aa7.1□□□□□ -1.27
SPG11-212ENST00000558790 ZNF502Q8TBZ5 544 aa7.1□□□□□ -1.27
SPG11-212ENST00000558790 CXorf58Q96LI9 332 aa7.1□□□□□ -1.27
SPG11-212ENST00000558790 HSD17B10Q99714 261 aaKnown RBP7.1□□□□□ -1.27
SPG11-212ENST00000558790 ZNF436Q9C0F3 470 aaPredicted RBP7.1□□□□□ -1.27
SPG11-212ENST00000558790 C5orf66Q9H5L9 145 aa7.1□□□□□ -1.27
SPG11-212ENST00000558790 TAS2R8Q9NYW2 309 aa7.1□□□□□ -1.27
SPG11-212ENST00000558790 MRPL27Q9P0M9 148 aaKnown RBP7.1□□□□□ -1.27
SPG11-212ENST00000558790 UFC1Q9Y3C8 167 aa7.1□□□□□ -1.27
SPG11-212ENST00000558790 IGLC7A0M8Q6 106 aa7.09□□□□□ -1.27
SPG11-212ENST00000558790 IFITM5A6NNB3 132 aa7.09□□□□□ -1.27
SPG11-212ENST00000558790 HLA-GP17693 338 aa7.09□□□□□ -1.27
SPG11-212ENST00000558790 ELLP55199 621 aaPredicted RBP7.09□□□□□ -1.27
SPG11-212ENST00000558790 OR2B8PP59922 312 aa7.09□□□□□ -1.27
SPG11-212ENST00000558790 NANOS2P60321 138 aaKnown RBP7.09□□□□□ -1.27
SPG11-212ENST00000558790 MLLT11Q13015 90 aaPredicted RBP7.09□□□□□ -1.27
SPG11-212ENST00000558790 TIMM50Q3ZCQ8 353 aa7.09□□□□□ -1.27
SPG11-212ENST00000558790 OGFRL1Q5TC84 451 aaPredicted RBP7.09□□□□□ -1.27
SPG11-212ENST00000558790 PLET1Q6UQ28 207 aa7.09□□□□□ -1.27
SPG11-212ENST00000558790 CENPOQ9BU64 300 aa7.09□□□□□ -1.27
SPG11-212ENST00000558790 DAZ1Q9NQZ3 744 aaKnown RBP7.09□□□□□ -1.27
SPG11-212ENST00000558790 APOBP04114 4563 aaKnown RBP7.09□□□□□ -1.27
SPG11-212ENST00000558790 DMBT1Q9UGM3 2413 aaPredicted RBP7.08□□□□□ -1.28
SPG11-212ENST00000558790 IGHV3OR16-8A0A075B7F1 116 aa7.08□□□□□ -1.28
SPG11-212ENST00000558790 OR2T8A6NH00 312 aa7.08□□□□□ -1.28
SPG11-212ENST00000558790 TGOLN2O43493 480 aa7.08□□□□□ -1.28
SPG11-212ENST00000558790 TNFSF12O43508 249 aa7.08□□□□□ -1.28
SPG11-212ENST00000558790 SLC22A5O76082 557 aa7.08□□□□□ -1.28
SPG11-212ENST00000558790 HRASP01112 189 aa7.08□□□□□ -1.28
SPG11-212ENST00000558790 RPA2P15927 270 aa7.08□□□□□ -1.28
SPG11-212ENST00000558790 RANBP1P43487 201 aa7.08□□□□□ -1.28
SPG11-212ENST00000558790 NR2C2APQ86WQ0 139 aa7.08□□□□□ -1.28
SPG11-212ENST00000558790 OR5B3Q8NH48 314 aa7.08□□□□□ -1.28
SPG11-212ENST00000558790 NUDCD2Q8WVJ2 157 aa7.08□□□□□ -1.28
SPG11-212ENST00000558790 GALNT14Q96FL9 552 aa7.08□□□□□ -1.28
SPG11-212ENST00000558790 MAP6D1Q9H9H5 199 aa7.08□□□□□ -1.28
SPG11-212ENST00000558790 SCN3BQ9NY72 215 aa7.08□□□□□ -1.28
SPG11-212ENST00000558790 BET1LQ9NYM9 111 aa7.08□□□□□ -1.28
SPG11-212ENST00000558790 FBXL17Q9UF56 701 aa7.08□□□□□ -1.28
SPG11-212ENST00000558790 TRAV3A0A0B4J244 114 aa7.07□□□□□ -1.28
SPG11-212ENST00000558790 METTL21EPA6NDL7 271 aa7.07□□□□□ -1.28
SPG11-212ENST00000558790 TMEM235A6NFC5 223 aa7.07□□□□□ -1.28
SPG11-212ENST00000558790 OR4C46A6NHA9 309 aa7.07□□□□□ -1.28
SPG11-212ENST00000558790 CASQ2O14958 399 aaPredicted RBP7.07□□□□□ -1.28
SPG11-212ENST00000558790 ZNF207O43670 478 aaKnown RBP7.07□□□□□ -1.28
SPG11-212ENST00000558790 CTXN2P0C2S0 81 aa7.07□□□□□ -1.28
SPG11-212ENST00000558790 PTBP1P26599 531 aaKnown RBP eCLIP7.07□□□□□ -1.28
SPG11-212ENST00000558790 RBMS2Q15434 407 aaKnown RBP7.07□□□□□ -1.28
SPG11-212ENST00000558790 SSX1Q16384 188 aa7.07□□□□□ -1.28
SPG11-212ENST00000558790 HACD4Q5VWC8 232 aa7.07□□□□□ -1.28
SPG11-212ENST00000558790 APRG1Q8IVJ8 170 aa7.07□□□□□ -1.28
SPG11-212ENST00000558790 OR4A5Q8NH83 315 aa7.07□□□□□ -1.28
SPG11-212ENST00000558790 CD300LFQ8TDQ1 290 aa7.07□□□□□ -1.28
SPG11-212ENST00000558790 DAZAP1Q96EP5 407 aaKnown RBP7.07□□□□□ -1.28
SPG11-212ENST00000558790 MGLLQ99685 303 aa7.07□□□□□ -1.28
SPG11-212ENST00000558790 ATG5Q9H1Y0 275 aa7.07□□□□□ -1.28
SPG11-212ENST00000558790 C11orf68Q9H3H3 251 aaKnown RBP7.07□□□□□ -1.28
SPG11-212ENST00000558790 HRASLSQ9HDD0 168 aa7.07□□□□□ -1.28
SPG11-212ENST00000558790 ACOT13Q9NPJ3 140 aa7.07□□□□□ -1.28
SPG11-212ENST00000558790 TRAV1-2A0A0B4J238 106 aa7.06□□□□□ -1.28
SPG11-212ENST00000558790 SMIM30A4D0T7 59 aa7.06□□□□□ -1.28
SPG11-212ENST00000558790 ERICH4A6NGS2 130 aa7.06□□□□□ -1.28
SPG11-212ENST00000558790 PDCD5O14737 125 aa7.06□□□□□ -1.28
SPG11-212ENST00000558790 SSX5O60225 188 aa7.06□□□□□ -1.28
SPG11-212ENST00000558790 CTSDP07339 412 aaPredicted RBP7.06□□□□□ -1.28
SPG11-212ENST00000558790 MYL9P24844 172 aa7.06□□□□□ -1.28
SPG11-212ENST00000558790 CDNFQ49AH0 187 aa7.06□□□□□ -1.28
SPG11-212ENST00000558790 CNIH2Q6PI25 160 aa7.06□□□□□ -1.28
SPG11-212ENST00000558790 ZNF66Q6ZN08 573 aa7.06□□□□□ -1.28
SPG11-212ENST00000558790 SPAG16Q8N0X2 631 aa7.06□□□□□ -1.28
SPG11-212ENST00000558790 GDPD1Q8N9F7 314 aa7.06□□□□□ -1.28
SPG11-212ENST00000558790 OR10W1Q8NGF6 305 aa7.06□□□□□ -1.28
SPG11-212ENST00000558790 C11orf45Q8TAV5 145 aa7.06□□□□□ -1.28
SPG11-212ENST00000558790 BSCL2Q96G97 398 aaPredicted RBP7.06□□□□□ -1.28
SPG11-212ENST00000558790 CHRDL1Q9BU40 450 aa7.06□□□□□ -1.28
SPG11-212ENST00000558790 C20orf24Q9BUV8 137 aa7.06□□□□□ -1.28
SPG11-212ENST00000558790 QTRT1Q9BXR0 403 aaKnown RBP7.06□□□□□ -1.28
SPG11-212ENST00000558790 MFFQ9GZY8 342 aa7.06□□□□□ -1.28
SPG11-212ENST00000558790 DUSP21Q9H596 190 aa7.06□□□□□ -1.28
SPG11-212ENST00000558790 THYN1Q9P016 225 aa7.06□□□□□ -1.28
SPG11-212ENST00000558790 ANXA10Q9UJ72 324 aa7.06□□□□□ -1.28
SPG11-212ENST00000558790 IGHV3-21A0A0B4J1V1 117 aa7.05□□□□□ -1.28
SPG11-212ENST00000558790 SULT1C2O00338 296 aa7.05□□□□□ -1.28
SPG11-212ENST00000558790 NDUFA4O00483 81 aa7.05□□□□□ -1.28
SPG11-212ENST00000558790 DEFB4AO15263 64 aa7.05□□□□□ -1.28
SPG11-212ENST00000558790 PTHLHP12272 177 aa7.05□□□□□ -1.28
SPG11-212ENST00000558790 RAB3BP20337 219 aa7.05□□□□□ -1.28
SPG11-212ENST00000558790 MFAP2P55001 183 aa7.05□□□□□ -1.28
SPG11-212ENST00000558790 TAS2R31P59538 309 aa7.05□□□□□ -1.28
SPG11-212ENST00000558790 WT1-ASQ06250 92 aa7.05□□□□□ -1.28
SPG11-212ENST00000558790 ARL6IP1Q15041 203 aa7.05□□□□□ -1.28
SPG11-212ENST00000558790 FAM90A2PQ658T7 463 aa7.05□□□□□ -1.28
SPG11-212ENST00000558790 LAMTOR1Q6IAA8 161 aa7.05□□□□□ -1.28
SPG11-212ENST00000558790 OR13F1Q8NGS4 319 aa7.05□□□□□ -1.28
SPG11-212ENST00000558790 VN1R17PQ8TDU5 208 aa7.05□□□□□ -1.28
SPG11-212ENST00000558790 C2CD4CQ8TF44 421 aa7.05□□□□□ -1.28
SPG11-212ENST00000558790 SECTM1Q8WVN6 248 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms