RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 RAB2AP61019 212 aa10.38□□□□□ -0.75
SMAD3-207ENST00000558763 SSBP2P81877 361 aaPredicted RBP10.38□□□□□ -0.75
SMAD3-207ENST00000558763 GUK1Q16774 197 aa10.38□□□□□ -0.75
SMAD3-207ENST00000558763 FBLN7Q53RD9 439 aa10.38□□□□□ -0.75
SMAD3-207ENST00000558763 VMO1Q7Z5L0 202 aa10.38□□□□□ -0.75
SMAD3-207ENST00000558763 LHFPL4Q7Z7J7 247 aa10.38□□□□□ -0.75
SMAD3-207ENST00000558763 RPP25LQ8N5L8 163 aaKnown RBP10.38□□□□□ -0.75
SMAD3-207ENST00000558763 TREM1Q9NP99 234 aa10.38□□□□□ -0.75
SMAD3-207ENST00000558763 KPTNQ9Y664 436 aa10.38□□□□□ -0.75
SMAD3-207ENST00000558763 FOXH1O75593 365 aa10.37□□□□□ -0.75
SMAD3-207ENST00000558763 APOC3P02656 99 aa10.37□□□□□ -0.75
SMAD3-207ENST00000558763 HTR1DP28221 377 aa10.37□□□□□ -0.75
SMAD3-207ENST00000558763 ELLP55199 621 aaPredicted RBP10.37□□□□□ -0.75
SMAD3-207ENST00000558763 WT1-ASQ06250 92 aa10.37□□□□□ -0.75
SMAD3-207ENST00000558763 C2orf83Q53S99 150 aa10.37□□□□□ -0.75
SMAD3-207ENST00000558763 TMEM41BQ5BJD5 291 aa10.37□□□□□ -0.75
SMAD3-207ENST00000558763 LFNGQ8NES3 379 aa10.37□□□□□ -0.75
SMAD3-207ENST00000558763 OR1L8Q8NGR8 309 aa10.37□□□□□ -0.75
SMAD3-207ENST00000558763 MBD3L1Q8WWY6 194 aa10.37□□□□□ -0.75
SMAD3-207ENST00000558763 DPM3Q9P2X0 92 aa10.37□□□□□ -0.75
SMAD3-207ENST00000558763 CR1P17927 2039 aa10.37□□□□□ -0.75
SMAD3-207ENST00000558763 BTBD17A6NE02 478 aa10.37□□□□□ -0.75
SMAD3-207ENST00000558763 TIMM23O14925 209 aa10.37□□□□□ -0.75
SMAD3-207ENST00000558763 VENTXO95231 258 aa10.37□□□□□ -0.75
SMAD3-207ENST00000558763 PAX6P26367 422 aa10.37□□□□□ -0.75
SMAD3-207ENST00000558763 RAB11AP62491 216 aa10.37□□□□□ -0.75
SMAD3-207ENST00000558763 LOXL1Q08397 574 aaPredicted RBP10.37□□□□□ -0.75
SMAD3-207ENST00000558763 PSG5Q15238 335 aa10.37□□□□□ -0.75
SMAD3-207ENST00000558763 GUCA2BQ16661 112 aa10.37□□□□□ -0.75
SMAD3-207ENST00000558763 VMA21Q3ZAQ7 101 aa10.37□□□□□ -0.75
SMAD3-207ENST00000558763 MOB3BQ86TA1 216 aa10.37□□□□□ -0.75
SMAD3-207ENST00000558763 TEX45Q8NA69 505 aa10.37□□□□□ -0.75
SMAD3-207ENST00000558763 MGST2Q99735 147 aa10.37□□□□□ -0.75
SMAD3-207ENST00000558763 SEC11CQ9BY50 192 aa10.37□□□□□ -0.75
SMAD3-207ENST00000558763 COMMD5Q9GZQ3 224 aa10.37□□□□□ -0.75
SMAD3-207ENST00000558763 ENY2Q9NPA8 101 aa10.37□□□□□ -0.75
SMAD3-207ENST00000558763 KIAA1456Q9P272 454 aa10.37□□□□□ -0.75
SMAD3-207ENST00000558763 IFNA4P05014 189 aa10.36□□□□□ -0.75
SMAD3-207ENST00000558763 SFTA3P0C7M3 94 aa10.36□□□□□ -0.75
SMAD3-207ENST00000558763 PRSS8Q16651 343 aa10.36□□□□□ -0.75
SMAD3-207ENST00000558763 DYNAPQ8N1N2 210 aa10.36□□□□□ -0.75
SMAD3-207ENST00000558763 CIARTQ8N365 385 aaPredicted RBP10.36□□□□□ -0.75
SMAD3-207ENST00000558763 SFT2D1Q8WV19 159 aa10.36□□□□□ -0.75
SMAD3-207ENST00000558763 AJUBAQ96IF1 538 aa10.36□□□□□ -0.75
SMAD3-207ENST00000558763 TBX15Q96SF7 602 aa10.36□□□□□ -0.75
SMAD3-207ENST00000558763 POLR3KQ9Y2Y1 108 aaPredicted RBP10.36□□□□□ -0.75
SMAD3-207ENST00000558763 SIGLEC9Q9Y336 463 aa10.36□□□□□ -0.75
SMAD3-207ENST00000558763 SMAD7O15105 426 aaKnown RBP10.35□□□□□ -0.75
SMAD3-207ENST00000558763 EIF3GO75821 320 aaKnown RBP eCLIP10.35□□□□□ -0.75
SMAD3-207ENST00000558763 C17orf50Q8WW18 174 aa10.35□□□□□ -0.75
SMAD3-207ENST00000558763 RARRES2Q99969 163 aa10.35□□□□□ -0.75
SMAD3-207ENST00000558763 GGTLC1Q9BX51 225 aa10.35□□□□□ -0.75
SMAD3-207ENST00000558763 IGLC7A0M8Q6 106 aa10.35□□□□□ -0.75
SMAD3-207ENST00000558763 FNDC10F2Z333 226 aa10.35□□□□□ -0.75
SMAD3-207ENST00000558763 YIF1AO95070 293 aa10.35□□□□□ -0.75
SMAD3-207ENST00000558763 MSMBP08118 114 aa10.35□□□□□ -0.75
SMAD3-207ENST00000558763 DEFA4P12838 97 aa10.35□□□□□ -0.75
SMAD3-207ENST00000558763 ATP5IP56385 69 aaPredicted RBP10.35□□□□□ -0.75
SMAD3-207ENST00000558763 FFAR4Q5NUL3 377 aa10.35□□□□□ -0.75
SMAD3-207ENST00000558763 ZFHX3Q15911 3703 aa10.35□□□□□ -0.75
SMAD3-207ENST00000558763 IGKV1OR2-108A0A075B7D4 117 aa10.34□□□□□ -0.75
SMAD3-207ENST00000558763 A0A1W2PRD5 423 aa10.34□□□□□ -0.75
SMAD3-207ENST00000558763 A0A1W2PRF3 423 aa10.34□□□□□ -0.75
SMAD3-207ENST00000558763 A0A1W2PRM7 423 aa10.34□□□□□ -0.75
SMAD3-207ENST00000558763 B4DSR2 109 aa10.34□□□□□ -0.75
SMAD3-207ENST00000558763 F8W036 122 aa10.34□□□□□ -0.75
SMAD3-207ENST00000558763 MPDU1O75352 247 aa10.34□□□□□ -0.75
SMAD3-207ENST00000558763 TMEM249Q2WGJ8 235 aa10.34□□□□□ -0.75
SMAD3-207ENST00000558763 GCSAMLQ5JQS6 135 aa10.34□□□□□ -0.75
SMAD3-207ENST00000558763 RNF5Q99942 180 aa10.34□□□□□ -0.75
SMAD3-207ENST00000558763 HILPDAQ9Y5L2 63 aa10.34□□□□□ -0.75
SMAD3-207ENST00000558763 SMCO3A2RU48 225 aa10.34□□□□□ -0.75
SMAD3-207ENST00000558763 RBFOX3A6NFN3 312 aa10.34□□□□□ -0.75
SMAD3-207ENST00000558763 HBE1P02100 147 aa10.34□□□□□ -0.75
SMAD3-207ENST00000558763 COMPP49747 757 aaPredicted RBP10.34□□□□□ -0.75
SMAD3-207ENST00000558763 PPT1P50897 306 aa10.34□□□□□ -0.75
SMAD3-207ENST00000558763 PVRIGQ6DKI7 326 aa10.34□□□□□ -0.75
SMAD3-207ENST00000558763 LCN15Q6UWW0 184 aa10.34□□□□□ -0.75
SMAD3-207ENST00000558763 MMD2Q8IY49 270 aa10.34□□□□□ -0.75
SMAD3-207ENST00000558763 NPVFQ9HCQ7 196 aa10.34□□□□□ -0.75
SMAD3-207ENST00000558763 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.33□□□□□ -0.763e-14■■□□□ 13.5
SMAD3-207ENST00000558763 A0A1W2PN81 502 aa10.33□□□□□ -0.76
SMAD3-207ENST00000558763 MAP1LC3B2A6NCE7 125 aa10.33□□□□□ -0.76
SMAD3-207ENST00000558763 IGHV4-31P0DP07 118 aa10.33□□□□□ -0.76
SMAD3-207ENST00000558763 CHRNA7P36544 502 aa10.33□□□□□ -0.76
SMAD3-207ENST00000558763 CEACAM3P40198 252 aa10.33□□□□□ -0.76
SMAD3-207ENST00000558763 OPRK1P41145 380 aa10.33□□□□□ -0.76
SMAD3-207ENST00000558763 FGF8P55075 233 aaPredicted RBP10.33□□□□□ -0.76
SMAD3-207ENST00000558763 DEFA5Q01523 94 aa10.33□□□□□ -0.76
SMAD3-207ENST00000558763 ICAM4Q14773 271 aa10.33□□□□□ -0.76
SMAD3-207ENST00000558763 PEA15Q15121 130 aa10.33□□□□□ -0.76
SMAD3-207ENST00000558763 MLANAQ16655 118 aa10.33□□□□□ -0.76
SMAD3-207ENST00000558763 ZNF506Q5JVG8 444 aa10.33□□□□□ -0.76
SMAD3-207ENST00000558763 PPP1R27Q86WC6 154 aa10.33□□□□□ -0.76
SMAD3-207ENST00000558763 LINC01356Q8N9X3 169 aa10.33□□□□□ -0.76
SMAD3-207ENST00000558763 P2RX4Q99571 388 aa10.33□□□□□ -0.76
SMAD3-207ENST00000558763 MAP1LC3BQ9GZQ8 125 aa10.33□□□□□ -0.76
SMAD3-207ENST00000558763 EIF5A2Q9GZV4 153 aaKnown RBP10.33□□□□□ -0.76
SMAD3-207ENST00000558763 FBXL15Q9H469 300 aa10.33□□□□□ -0.76
SMAD3-207ENST00000558763 SLC25A22Q9H936 323 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms