RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 OR2C3Q8N628 320 aa8.57□□□□□ -1.04
CASC4-205ENST00000558735 OR1L6Q8NGR2 347 aa8.57□□□□□ -1.04
CASC4-205ENST00000558735 TMEM190Q8WZ59 177 aa8.57□□□□□ -1.04
CASC4-205ENST00000558735 LINC00476Q8WZB0 136 aa8.57□□□□□ -1.04
CASC4-205ENST00000558735 LSM10Q969L4 123 aaKnown RBP8.57□□□□□ -1.04
CASC4-205ENST00000558735 BSCL2Q96G97 398 aaPredicted RBP8.57□□□□□ -1.04
CASC4-205ENST00000558735 SEC22AQ96IW7 307 aa8.57□□□□□ -1.04
CASC4-205ENST00000558735 CMTM3Q96MX0 182 aa8.57□□□□□ -1.04
CASC4-205ENST00000558735 ATP6V0BQ99437 205 aa8.57□□□□□ -1.04
CASC4-205ENST00000558735 FUNDC2Q9BWH2 189 aa8.57□□□□□ -1.04
CASC4-205ENST00000558735 GGTLC1Q9BX51 225 aa8.57□□□□□ -1.04
CASC4-205ENST00000558735 TMEM14BQ9NUH8 114 aa8.57□□□□□ -1.04
CASC4-205ENST00000558735 FKBP11Q9NYL4 201 aa8.57□□□□□ -1.04
CASC4-205ENST00000558735 C21orf62Q9NYP8 219 aa8.57□□□□□ -1.04
CASC4-205ENST00000558735 IGHV3OR16-8A0A075B7F1 116 aa8.56□□□□□ -1.04
CASC4-205ENST00000558735 SMIM31A0A1B0GVY4 71 aa8.56□□□□□ -1.04
CASC4-205ENST00000558735 K7EMT4 169 aa8.56□□□□□ -1.04
CASC4-205ENST00000558735 NDUFA4O00483 81 aa8.56□□□□□ -1.04
CASC4-205ENST00000558735 TSPAN4O14817 238 aa8.56□□□□□ -1.04
CASC4-205ENST00000558735 ELK1P19419 428 aa8.56□□□□□ -1.04
CASC4-205ENST00000558735 UCP3P55916 312 aa8.56□□□□□ -1.04
CASC4-205ENST00000558735 VBP1P61758 197 aa8.56□□□□□ -1.04
CASC4-205ENST00000558735 TSPAN5P62079 268 aa8.56□□□□□ -1.04
CASC4-205ENST00000558735 LPCAT3Q6P1A2 487 aa8.56□□□□□ -1.04
CASC4-205ENST00000558735 TBC1D26Q86UD7 250 aa8.56□□□□□ -1.04
CASC4-205ENST00000558735 OR5B3Q8NH48 314 aa8.56□□□□□ -1.04
CASC4-205ENST00000558735 TMEM56Q96MV1 263 aa8.56□□□□□ -1.04
CASC4-205ENST00000558735 VCX3AQ9NNX9 186 aa8.56□□□□□ -1.04
CASC4-205ENST00000558735 DAZ1Q9NQZ3 744 aaKnown RBP8.56□□□□□ -1.04
CASC4-205ENST00000558735 FAM212BQ9NTI7 297 aaPredicted RBP8.56□□□□□ -1.04
CASC4-205ENST00000558735 PRNDQ9UKY0 176 aa8.56□□□□□ -1.04
CASC4-205ENST00000558735 KMT2AQ03164 3969 aa8.56□□□□□ -1.04
CASC4-205ENST00000558735 C15orf61A6NNL5 157 aa8.55□□□□□ -1.04
CASC4-205ENST00000558735 ZNF207O43670 478 aaKnown RBP8.55□□□□□ -1.04
CASC4-205ENST00000558735 HPGDSO60760 199 aa8.55□□□□□ -1.04
CASC4-205ENST00000558735 TNFAIP8O95379 198 aa8.55□□□□□ -1.04
CASC4-205ENST00000558735 SNX29P2Q8IUI4 249 aa8.55□□□□□ -1.04
CASC4-205ENST00000558735 SLC38A6Q8IZM9 456 aa8.55□□□□□ -1.04
CASC4-205ENST00000558735 UBAC2Q8NBM4 344 aa8.55□□□□□ -1.04
CASC4-205ENST00000558735 OR1P1Q8NH06 330 aa8.55□□□□□ -1.04
CASC4-205ENST00000558735 TSC22D3Q99576 134 aa8.55□□□□□ -1.04
CASC4-205ENST00000558735 SPAG8Q99932 426 aaPredicted RBP8.55□□□□□ -1.04
CASC4-205ENST00000558735 C20orf24Q9BUV8 137 aa8.55□□□□□ -1.04
CASC4-205ENST00000558735 SCPEP1Q9HB40 452 aa8.55□□□□□ -1.04
CASC4-205ENST00000558735 UBQLN2Q9UHD9 624 aa8.55□□□□□ -1.04
CASC4-205ENST00000558735 KIAA1109Q2LD37 5005 aa8.54□□□□□ -1.04
CASC4-205ENST00000558735 I3L2K1 104 aa8.54□□□□□ -1.04
CASC4-205ENST00000558735 M0QYG6 137 aa8.54□□□□□ -1.04
CASC4-205ENST00000558735 HSPE1P61604 102 aaKnown RBP8.54□□□□□ -1.04
CASC4-205ENST00000558735 Q56UQ5 140 aa8.54□□□□□ -1.04
CASC4-205ENST00000558735 LAMTOR1Q6IAA8 161 aa8.54□□□□□ -1.04
CASC4-205ENST00000558735 H2BFWTQ7Z2G1 175 aa8.54□□□□□ -1.04
CASC4-205ENST00000558735 KLK11Q9UBX7 282 aa8.54□□□□□ -1.04
CASC4-205ENST00000558735 SMPXQ9UHP9 88 aa8.54□□□□□ -1.04
CASC4-205ENST00000558735 C15orf62A8K5M9 175 aa8.53□□□□□ -1.04
CASC4-205ENST00000558735 IGHV3-48P01763 117 aa8.53□□□□□ -1.04
CASC4-205ENST00000558735 CTSDP07339 412 aaPredicted RBP8.53□□□□□ -1.04
CASC4-205ENST00000558735 S100GP29377 79 aa8.53□□□□□ -1.04
CASC4-205ENST00000558735 FCGR2BP31994 310 aaPredicted RBP8.53□□□□□ -1.04
CASC4-205ENST00000558735 RCVRNP35243 200 aa8.53□□□□□ -1.04
CASC4-205ENST00000558735 RORCP51449 518 aa8.53□□□□□ -1.04
CASC4-205ENST00000558735 MFAP4P55083 255 aa8.53□□□□□ -1.04
CASC4-205ENST00000558735 EWSR1Q01844 656 aaKnown RBP eCLIP8.53□□□□□ -1.04
CASC4-205ENST00000558735 IZUMO4Q1ZYL8 232 aa8.53□□□□□ -1.04
CASC4-205ENST00000558735 ODF3L2Q3SX64 289 aa8.53□□□□□ -1.04
CASC4-205ENST00000558735 Q6ZWC4 215 aa8.53□□□□□ -1.04
CASC4-205ENST00000558735 WFDC3Q8IUB2 231 aa8.53□□□□□ -1.04
CASC4-205ENST00000558735 OR4A16Q8NH70 328 aa8.53□□□□□ -1.04
CASC4-205ENST00000558735 TXN2Q99757 166 aa8.53□□□□□ -1.04
CASC4-205ENST00000558735 CHEK1O14757 476 aa8.52□□□□□ -1.05
CASC4-205ENST00000558735 SPRY2O43597 315 aa8.52□□□□□ -1.05
CASC4-205ENST00000558735 PRCDQ00LT1 54 aa8.52□□□□□ -1.05
CASC4-205ENST00000558735 ZNF114Q8NC26 417 aa8.52□□□□□ -1.05
CASC4-205ENST00000558735 MRGPRFQ96AM1 343 aa8.52□□□□□ -1.05
CASC4-205ENST00000558735 MISP3Q96FF7 219 aa8.52□□□□□ -1.05
CASC4-205ENST00000558735 OR10C1Q96KK4 312 aa8.52□□□□□ -1.05
CASC4-205ENST00000558735 RNF2Q99496 336 aa8.52□□□□□ -1.05
CASC4-205ENST00000558735 RHPN1-AS1Q9BWJ2 59 aa8.52□□□□□ -1.05
CASC4-205ENST00000558735 NXF2Q9GZY0 626 aaKnown RBP8.52□□□□□ -1.05
CASC4-205ENST00000558735 NAA50Q9GZZ1 169 aaKnown RBP8.52□□□□□ -1.05
CASC4-205ENST00000558735 TP53TG1Q9Y2A0 90 aa8.52□□□□□ -1.05
CASC4-205ENST00000558735 IGHV3-49A0A0A0MS15 119 aa8.51□□□□□ -1.05
CASC4-205ENST00000558735 A0A0B4J293 547 aa8.51□□□□□ -1.05
CASC4-205ENST00000558735 IGHV7-4-1A0A0J9YVY3 117 aa8.51□□□□□ -1.05
CASC4-205ENST00000558735 A0A0J9YWU9 116 aa8.51□□□□□ -1.05
CASC4-205ENST00000558735 UBE2CO00762 179 aa8.51□□□□□ -1.05
CASC4-205ENST00000558735 NUPL2O15504 423 aaKnown RBP8.51□□□□□ -1.05
CASC4-205ENST00000558735 MT-CO2P00403 227 aa8.51□□□□□ -1.05
CASC4-205ENST00000558735 IGKV1-5P01602 117 aa8.51□□□□□ -1.05
CASC4-205ENST00000558735 P0C879 139 aa8.51□□□□□ -1.05
CASC4-205ENST00000558735 PI3P19957 117 aa8.51□□□□□ -1.05
CASC4-205ENST00000558735 APOC4P55056 127 aa8.51□□□□□ -1.05
CASC4-205ENST00000558735 RND3P61587 244 aa8.51□□□□□ -1.05
CASC4-205ENST00000558735 ERHP84090 104 aaKnown RBP8.51□□□□□ -1.05
CASC4-205ENST00000558735 TNFRSF9Q07011 255 aa8.51□□□□□ -1.05
CASC4-205ENST00000558735 CTF1Q16619 201 aa8.51□□□□□ -1.05
CASC4-205ENST00000558735 FAM90A2PQ658T7 463 aa8.51□□□□□ -1.05
CASC4-205ENST00000558735 LHFPL1Q86WI0 220 aa8.51□□□□□ -1.05
CASC4-205ENST00000558735 APRG1Q8IVJ8 170 aa8.51□□□□□ -1.05
CASC4-205ENST00000558735 TMEM116Q8NCL8 245 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms